RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PREX2Q70Z35 1606 aa32.11■■■□□ 2.73
CMTM3-206ENST00000563672 TIAM1Q13009 1591 aa32.11■■■□□ 2.73
CMTM3-206ENST00000563672 GPATCH8Q9UKJ3 1502 aaKnown RBP32.1■■■□□ 2.73
CMTM3-206ENST00000563672 CDC42BPBQ9Y5S2 1711 aa32.1■■■□□ 2.73
CMTM3-206ENST00000563672 RICTORQ6R327 1708 aa32.09■■■□□ 2.73
CMTM3-206ENST00000563672 POGZQ7Z3K3 1410 aa32.07■■■□□ 2.72
CMTM3-206ENST00000563672 CDC42BPAQ5VT25 1732 aa32.06■■■□□ 2.72
CMTM3-206ENST00000563672 CCNB3Q8WWL7 1395 aa32.06■■■□□ 2.72
CMTM3-206ENST00000563672 MAP3K1Q13233 1512 aa32.05■■■□□ 2.72
CMTM3-206ENST00000563672 KDM4FA0A1W2PPD8 638 aa32.05■■■□□ 2.72
CMTM3-206ENST00000563672 ZMYM4Q5VZL5 1548 aa32.01■■■□□ 2.72
CMTM3-206ENST00000563672 LRRC9Q6ZRR7 1453 aa32.01■■■□□ 2.71
CMTM3-206ENST00000563672 CFDP1Q9UEE9 299 aaPredicted RBP31.99■■■□□ 2.71
CMTM3-206ENST00000563672 MAGI2Q86UL8 1455 aa31.97■■■□□ 2.71
CMTM3-206ENST00000563672 KANK4Q5T7N3 995 aaPredicted RBP31.97■■■□□ 2.71
CMTM3-206ENST00000563672 AEBP2Q6ZN18 517 aaPredicted RBP31.97■■■□□ 2.71
CMTM3-206ENST00000563672 AFAP1Q8N556 730 aa31.97■■■□□ 2.71
CMTM3-206ENST00000563672 ABCC1P33527 1531 aa31.96■■■□□ 2.71
CMTM3-206ENST00000563672 ARHGEF12Q9NZN5 1544 aa31.96■■■□□ 2.71
CMTM3-206ENST00000563672 ZNF777Q9ULD5 760 aaPredicted RBP31.96■■■□□ 2.71
CMTM3-206ENST00000563672 NCOA2Q15596 1464 aa31.96■■■□□ 2.71
CMTM3-206ENST00000563672 ZNF518AQ6AHZ1 1483 aa31.96■■■□□ 2.71
CMTM3-206ENST00000563672 SUPT6HQ7KZ85 1726 aaKnown RBP31.92■■■□□ 2.7
CMTM3-206ENST00000563672 ARHGEF40Q8TER5 1519 aa31.92■■■□□ 2.7
CMTM3-206ENST00000563672 YEATS2Q9ULM3 1422 aa31.92■■■□□ 2.7
CMTM3-206ENST00000563672 TRAPPC8Q9Y2L5 1435 aa31.92■■■□□ 2.7
CMTM3-206ENST00000563672 SAMD9LQ8IVG5 1584 aa31.91■■■□□ 2.7
CMTM3-206ENST00000563672 APLP2Q06481 763 aa31.9■■■□□ 2.7
CMTM3-206ENST00000563672 ZFYVE16Q7Z3T8 1539 aa31.9■■■□□ 2.7
CMTM3-206ENST00000563672 KDM5CP41229 1560 aa31.9■■■□□ 2.7
CMTM3-206ENST00000563672 KIAA1107Q9UPP5 1409 aa31.88■■■□□ 2.69
CMTM3-206ENST00000563672 PLEKHH2Q8IVE3 1493 aa31.86■■■□□ 2.69
CMTM3-206ENST00000563672 ITSN2Q9NZM3 1697 aa31.86■■■□□ 2.69
CMTM3-206ENST00000563672 HNRNPMP52272 730 aaKnown RBP eCLIP31.85■■■□□ 2.69
CMTM3-206ENST00000563672 ZNF644Q9H582 1327 aaPredicted RBP31.84■■■□□ 2.69
CMTM3-206ENST00000563672 SYCP2Q9BX26 1530 aa31.83■■■□□ 2.69
CMTM3-206ENST00000563672 MLH3Q9UHC1 1453 aa31.83■■■□□ 2.69
CMTM3-206ENST00000563672 ATP10AO60312 1499 aa31.8■■■□□ 2.68
CMTM3-206ENST00000563672 ARID4BQ4LE39 1312 aaPredicted RBP31.78■■■□□ 2.68
CMTM3-206ENST00000563672 HECW2Q9P2P5 1572 aa31.77■■■□□ 2.68
CMTM3-206ENST00000563672 MYT1LQ9UL68 1186 aa31.76■■■□□ 2.67
CMTM3-206ENST00000563672 MBD5Q9P267 1494 aa31.75■■■□□ 2.67
CMTM3-206ENST00000563672 C9orf84Q5VXU9 1444 aa31.74■■■□□ 2.67
CMTM3-206ENST00000563672 SPAG9O60271 1321 aaKnown RBP31.72■■■□□ 2.67
CMTM3-206ENST00000563672 DIP2CQ9Y2E4 1556 aa31.7■■■□□ 2.67
CMTM3-206ENST00000563672 MYOM3Q5VTT5 1437 aa31.7■■■□□ 2.67
CMTM3-206ENST00000563672 CAMSAP2Q08AD1 1489 aa31.7■■■□□ 2.66
CMTM3-206ENST00000563672 SIGLEC1Q9BZZ2 1709 aa31.69■■■□□ 2.66
CMTM3-206ENST00000563672 KIDINS220Q9ULH0 1771 aa31.68■■■□□ 2.66
CMTM3-206ENST00000563672 MIA2Q96PC5 1412 aa31.67■■■□□ 2.66
CMTM3-206ENST00000563672 BCORL1Q5H9F3 1711 aa31.67■■■□□ 2.66
CMTM3-206ENST00000563672 ADAMTSL3P82987 1691 aa31.67■■■□□ 2.66
CMTM3-206ENST00000563672 ABCA6Q8N139 1617 aa31.66■■■□□ 2.66
CMTM3-206ENST00000563672 RSPH4AQ5TD94 716 aa31.65■■■□□ 2.66
CMTM3-206ENST00000563672 REREQ9P2R6 1566 aa31.64■■■□□ 2.65
CMTM3-206ENST00000563672 ATP7AQ04656 1500 aa31.6■■■□□ 2.65
CMTM3-206ENST00000563672 INO80Q9ULG1 1556 aaPredicted RBP31.6■■■□□ 2.65
CMTM3-206ENST00000563672 CCDC141Q6ZP82 1450 aa31.59■■■□□ 2.65
CMTM3-206ENST00000563672 MLECQ14165 292 aa31.58■■■□□ 2.65
CMTM3-206ENST00000563672 RTEL1-TNFRSF6BF6WH68 1400 aa31.58■■■□□ 2.65
CMTM3-206ENST00000563672 ARHGEF5Q12774 1597 aa31.56■■■□□ 2.64
CMTM3-206ENST00000563672 AGLP35573 1532 aa31.56■■■□□ 2.64
CMTM3-206ENST00000563672 MADDQ8WXG6 1647 aa31.54■■■□□ 2.64
CMTM3-206ENST00000563672 PTPRMP28827 1452 aa31.53■■■□□ 2.64
CMTM3-206ENST00000563672 FGD6Q6ZV73 1430 aa31.51■■■□□ 2.64
CMTM3-206ENST00000563672 TSPY4P0CV99 314 aa31.5■■■□□ 2.63
CMTM3-206ENST00000563672 TSPY10P0CW01 314 aa31.5■■■□□ 2.63
CMTM3-206ENST00000563672 A2MP01023 1474 aa31.49■■■□□ 2.63
CMTM3-206ENST00000563672 TCOF1Q13428 1488 aaKnown RBP31.46■■■□□ 2.63
CMTM3-206ENST00000563672 PTPN23Q9H3S7 1636 aa31.46■■■□□ 2.63
CMTM3-206ENST00000563672 PLXNC1O60486 1568 aa31.45■■■□□ 2.63
CMTM3-206ENST00000563672 RIMS1Q86UR5 1692 aaKnown RBP31.42■■■□□ 2.62
CMTM3-206ENST00000563672 DHX29Q7Z478 1369 aaKnown RBP31.42■■■□□ 2.62
CMTM3-206ENST00000563672 ADGBQ8N7X0 1667 aa31.4■■■□□ 2.62
CMTM3-206ENST00000563672 MAST1Q9Y2H9 1570 aa31.39■■■□□ 2.62
CMTM3-206ENST00000563672 ABCC5O15440 1437 aa31.38■■■□□ 2.61
CMTM3-206ENST00000563672 FER1L4A9Z1Z3 1794 aa31.38■■■□□ 2.61
CMTM3-206ENST00000563672 PPARGC1BQ86YN6 1023 aaKnown RBP31.36■■■□□ 2.61
CMTM3-206ENST00000563672 DAPK1P53355 1430 aa31.32■■■□□ 2.61
CMTM3-206ENST00000563672 SHANK2Q9UPX8 1470 aa31.31■■■□□ 2.6
CMTM3-206ENST00000563672 DNMT1P26358 1616 aaKnown RBP31.29■■■□□ 2.6
CMTM3-206ENST00000563672 GGT6Q6P531 493 aa31.29■■■□□ 2.6
CMTM3-206ENST00000563672 ESF1Q9H501 851 aaKnown RBP31.29■■■□□ 2.6
CMTM3-206ENST00000563672 FAM50AQ14320 339 aaKnown RBP31.28■■■□□ 2.6
CMTM3-206ENST00000563672 CNTLNQ9NXG0 1405 aa31.27■■■□□ 2.6
CMTM3-206ENST00000563672 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
CMTM3-206ENST00000563672 PLPPR3Q6T4P5 718 aa31.27■■■□□ 2.6
CMTM3-206ENST00000563672 PPP6R1Q9UPN7 881 aa31.27■■■□□ 2.6
CMTM3-206ENST00000563672 KIF3BO15066 747 aa31.26■■■□□ 2.59
CMTM3-206ENST00000563672 CROCC2H7BZ55 1655 aa31.24■■■□□ 2.59
CMTM3-206ENST00000563672 KIF15Q9NS87 1388 aa31.19■■■□□ 2.58
CMTM3-206ENST00000563672 RRP7BPQ9NSQ0 103 aa31.19■■■□□ 2.58
CMTM3-206ENST00000563672 CHIC2Q9UKJ5 165 aa31.19■■■□□ 2.58
CMTM3-206ENST00000563672 DUOX2Q9NRD8 1548 aa31.18■■■□□ 2.58
CMTM3-206ENST00000563672 ZMYM3Q14202 1370 aa31.17■■■□□ 2.58
CMTM3-206ENST00000563672 ANKRD30AQ9BXX3 1397 aa31.16■■■□□ 2.58
CMTM3-206ENST00000563672 NCOA1Q15788 1441 aa31.15■■■□□ 2.58
CMTM3-206ENST00000563672 C3P01024 1663 aa31.14■■■□□ 2.58
CMTM3-206ENST00000563672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.14■■■□□ 2.58
CMTM3-206ENST00000563672 LMTK3Q96Q04 1460 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms