RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 ARHGEF40Q8TER5 1519 aa11.29□□□□□ -0.6
CDH11-208ENST00000563492 MADDQ8WXG6 1647 aa11.28□□□□□ -0.6
CDH11-208ENST00000563492 BCORL1Q5H9F3 1711 aa11.28□□□□□ -0.6
CDH11-208ENST00000563492 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
CDH11-208ENST00000563492 ZMYM4Q5VZL5 1548 aa11.27□□□□□ -0.61
CDH11-208ENST00000563492 ZFYVE16Q7Z3T8 1539 aa11.27□□□□□ -0.61
CDH11-208ENST00000563492 CEBPAP49715 358 aaPredicted RBP11.27□□□□□ -0.61
CDH11-208ENST00000563492 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
CDH11-208ENST00000563492 MYT1LQ9UL68 1186 aa11.25□□□□□ -0.61
CDH11-208ENST00000563492 MAGI2Q86UL8 1455 aa11.25□□□□□ -0.61
CDH11-208ENST00000563492 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
CDH11-208ENST00000563492 ARHGAP5Q13017 1502 aa11.25□□□□□ -0.61
CDH11-208ENST00000563492 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 LRRIQ1Q96JM4 1722 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 CLIP1P30622 1438 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 TRAPPC8Q9Y2L5 1435 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 ATP10AO60312 1499 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 ARHGEF12Q9NZN5 1544 aa11.24□□□□□ -0.61
CDH11-208ENST00000563492 PCF11O94913 1555 aaKnown RBP11.24□□□□□ -0.61
CDH11-208ENST00000563492 ZNF777Q9ULD5 760 aaPredicted RBP11.23□□□□□ -0.61
CDH11-208ENST00000563492 RIMS1Q86UR5 1692 aaKnown RBP11.23□□□□□ -0.61
CDH11-208ENST00000563492 ZNF518AQ6AHZ1 1483 aa11.2□□□□□ -0.62
CDH11-208ENST00000563492 C9orf84Q5VXU9 1444 aa11.2□□□□□ -0.62
CDH11-208ENST00000563492 HNRNPMP52272 730 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH11-208ENST00000563492 MYO5CQ9NQX4 1742 aa11.19□□□□□ -0.62
CDH11-208ENST00000563492 CCDC18Q5T9S5 1454 aa11.19□□□□□ -0.62
CDH11-208ENST00000563492 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
CDH11-208ENST00000563492 KDM5CP41229 1560 aa11.17□□□□□ -0.62
CDH11-208ENST00000563492 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
CDH11-208ENST00000563492 CDC42BPBQ9Y5S2 1711 aa11.17□□□□□ -0.62
CDH11-208ENST00000563492 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
CDH11-208ENST00000563492 LOC105371045A0A1W2PR82 267 aa11.16□□□□□ -0.62
CDH11-208ENST00000563492 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
CDH11-208ENST00000563492 MLH3Q9UHC1 1453 aa11.16□□□□□ -0.62
CDH11-208ENST00000563492 DIP2CQ9Y2E4 1556 aa11.16□□□□□ -0.62
CDH11-208ENST00000563492 FBXO41Q8TF61 875 aa11.15□□□□□ -0.62
CDH11-208ENST00000563492 ABCC1P33527 1531 aa11.14□□□□□ -0.63
CDH11-208ENST00000563492 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
CDH11-208ENST00000563492 SPAG9O60271 1321 aaKnown RBP11.13□□□□□ -0.63
CDH11-208ENST00000563492 MTUS2Q5JR59 1369 aa11.13□□□□□ -0.63
CDH11-208ENST00000563492 CCNB3Q8WWL7 1395 aa11.13□□□□□ -0.63
CDH11-208ENST00000563492 ABCA6Q8N139 1617 aa11.13□□□□□ -0.63
CDH11-208ENST00000563492 SAMD9LQ8IVG5 1584 aa11.11□□□□□ -0.63
CDH11-208ENST00000563492 CEP162Q5TB80 1403 aa11.11□□□□□ -0.63
CDH11-208ENST00000563492 FER1L4A9Z1Z3 1794 aa11.11□□□□□ -0.63
CDH11-208ENST00000563492 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
CDH11-208ENST00000563492 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
CDH11-208ENST00000563492 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
CDH11-208ENST00000563492 KIDINS220Q9ULH0 1771 aa11.09□□□□□ -0.63
CDH11-208ENST00000563492 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
CDH11-208ENST00000563492 AGLP35573 1532 aa11.09□□□□□ -0.63
CDH11-208ENST00000563492 ITSN2Q9NZM3 1697 aa11.08□□□□□ -0.64
CDH11-208ENST00000563492 REREQ9P2R6 1566 aa11.08□□□□□ -0.64
CDH11-208ENST00000563492 GGT6Q6P531 493 aa11.08□□□□□ -0.64
CDH11-208ENST00000563492 KIAA1107Q9UPP5 1409 aa11.08□□□□□ -0.64
CDH11-208ENST00000563492 UHRF1BP1Q6BDS2 1440 aa11.07□□□□□ -0.64
CDH11-208ENST00000563492 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
CDH11-208ENST00000563492 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
CDH11-208ENST00000563492 KANK4Q5T7N3 995 aaPredicted RBP11.04□□□□□ -0.64
CDH11-208ENST00000563492 A2MP01023 1474 aa11.04□□□□□ -0.64
CDH11-208ENST00000563492 ATP7AQ04656 1500 aa11.04□□□□□ -0.64
CDH11-208ENST00000563492 TIAM1Q13009 1591 aa11.03□□□□□ -0.64
CDH11-208ENST00000563492 PLEKHH2Q8IVE3 1493 aa11.03□□□□□ -0.64
CDH11-208ENST00000563492 C3P01024 1663 aa11.02□□□□□ -0.64
CDH11-208ENST00000563492 NCOA2Q15596 1464 aa11.02□□□□□ -0.65
CDH11-208ENST00000563492 NCKAP5LQ9HCH0 1330 aa11.02□□□□□ -0.65
CDH11-208ENST00000563492 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
CDH11-208ENST00000563492 CNTLNQ9NXG0 1405 aa11.01□□□□□ -0.65
CDH11-208ENST00000563492 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
CDH11-208ENST00000563492 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
CDH11-208ENST00000563492 STRCQ7RTU9 1775 aa11□□□□□ -0.65
CDH11-208ENST00000563492 INO80Q9ULG1 1556 aaPredicted RBP11□□□□□ -0.65
CDH11-208ENST00000563492 KIF3BO15066 747 aa11□□□□□ -0.65
CDH11-208ENST00000563492 FBXO31Q5XUX0 539 aaPredicted RBP11□□□□□ -0.65
CDH11-208ENST00000563492 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
CDH11-208ENST00000563492 DHX29Q7Z478 1369 aaKnown RBP10.99□□□□□ -0.65
CDH11-208ENST00000563492 PTPRKQ15262 1439 aa10.99□□□□□ -0.65
CDH11-208ENST00000563492 PLXNC1O60486 1568 aa10.99□□□□□ -0.65
CDH11-208ENST00000563492 NPATQ14207 1427 aa10.98□□□□□ -0.65
CDH11-208ENST00000563492 NCOA1Q15788 1441 aa10.98□□□□□ -0.65
CDH11-208ENST00000563492 VPS8Q8N3P4 1428 aa10.98□□□□□ -0.65
CDH11-208ENST00000563492 SETD1BQ9UPS6 1966 aaKnown RBP10.97□□□□□ -0.65
CDH11-208ENST00000563492 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
CDH11-208ENST00000563492 PTPRTO14522 1441 aa10.97□□□□□ -0.65
CDH11-208ENST00000563492 CAMSAP2Q08AD1 1489 aa10.97□□□□□ -0.65
CDH11-208ENST00000563492 LRRC9Q6ZRR7 1453 aa10.96□□□□□ -0.65
CDH11-208ENST00000563492 CCDC141Q6ZP82 1450 aa10.95□□□□□ -0.66
CDH11-208ENST00000563492 ZNF335Q9H4Z2 1342 aaPredicted RBP10.95□□□□□ -0.66
CDH11-208ENST00000563492 PPP6R1Q9UPN7 881 aa10.95□□□□□ -0.66
CDH11-208ENST00000563492 CLTCQ00610 1675 aaKnown RBP10.95□□□□□ -0.66
CDH11-208ENST00000563492 CAMSAP1Q5T5Y3 1602 aa10.95□□□□□ -0.66
CDH11-208ENST00000563492 WASHC2CQ9Y4E1 1318 aa10.94□□□□□ -0.66
CDH11-208ENST00000563492 TSPY4P0CV99 314 aa10.94□□□□□ -0.66
CDH11-208ENST00000563492 TSPY10P0CW01 314 aa10.94□□□□□ -0.66
CDH11-208ENST00000563492 RSPH4AQ5TD94 716 aa10.94□□□□□ -0.66
CDH11-208ENST00000563492 LTBP4Q8N2S1 1624 aa10.92□□□□□ -0.66
CDH11-208ENST00000563492 MROH2AA6NES4 1674 aa10.92□□□□□ -0.66
CDH11-208ENST00000563492 TNRQ92752 1358 aa10.9□□□□□ -0.66
CDH11-208ENST00000563492 PKD2Q13563 968 aa10.9□□□□□ -0.66
CDH11-208ENST00000563492 ADGBQ8N7X0 1667 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms