RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 TROQ12816 1431 aaPredicted RBP17.64■□□□□ 0.41
SIN3A-204ENST00000562776 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
SIN3A-204ENST00000562776 ARID4BQ4LE39 1312 aaPredicted RBP17.63■□□□□ 0.41
SIN3A-204ENST00000562776 EFCAB2Q5VUJ9 269 aa17.62■□□□□ 0.41
SIN3A-204ENST00000562776 KIF14Q15058 1648 aa17.61■□□□□ 0.41
SIN3A-204ENST00000562776 SCAPERQ9BY12 1400 aa17.61■□□□□ 0.41
SIN3A-204ENST00000562776 LOC105371045A0A1W2PR82 267 aa17.6■□□□□ 0.41
SIN3A-204ENST00000562776 POGZQ7Z3K3 1410 aa17.58■□□□□ 0.41
SIN3A-204ENST00000562776 YEATS2Q9ULM3 1422 aa17.58■□□□□ 0.41
SIN3A-204ENST00000562776 ZFYVE16Q7Z3T8 1539 aa17.57■□□□□ 0.4
SIN3A-204ENST00000562776 MADDQ8WXG6 1647 aa17.57■□□□□ 0.4
SIN3A-204ENST00000562776 MYO5CQ9NQX4 1742 aa17.55■□□□□ 0.4
SIN3A-204ENST00000562776 ATP10AO60312 1499 aa17.53■□□□□ 0.4
SIN3A-204ENST00000562776 SIGLEC1Q9BZZ2 1709 aa17.5■□□□□ 0.39
SIN3A-204ENST00000562776 ZNF518AQ6AHZ1 1483 aa17.5■□□□□ 0.39
SIN3A-204ENST00000562776 LMTK3Q96Q04 1460 aa17.5■□□□□ 0.39
SIN3A-204ENST00000562776 ARHGAP5Q13017 1502 aa17.49■□□□□ 0.39
SIN3A-204ENST00000562776 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
SIN3A-204ENST00000562776 C9orf84Q5VXU9 1444 aa17.48■□□□□ 0.39
SIN3A-204ENST00000562776 VPS8Q8N3P4 1428 aa17.47■□□□□ 0.39
SIN3A-204ENST00000562776 PREX2Q70Z35 1606 aa17.47■□□□□ 0.39
SIN3A-204ENST00000562776 AFAP1Q8N556 730 aa17.47■□□□□ 0.39
SIN3A-204ENST00000562776 KDM5CP41229 1560 aa17.47■□□□□ 0.39
SIN3A-204ENST00000562776 MTUS2Q5JR59 1369 aa17.46■□□□□ 0.39
SIN3A-204ENST00000562776 CDC42BPBQ9Y5S2 1711 aa17.45■□□□□ 0.38
SIN3A-204ENST00000562776 ARHGEF12Q9NZN5 1544 aa17.45■□□□□ 0.38
SIN3A-204ENST00000562776 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
SIN3A-204ENST00000562776 EHBP1L1Q8N3D4 1523 aa17.44■□□□□ 0.38
SIN3A-204ENST00000562776 MLECQ14165 292 aa17.44■□□□□ 0.38
SIN3A-204ENST00000562776 CDC42BPAQ5VT25 1732 aa17.43■□□□□ 0.38
SIN3A-204ENST00000562776 REREQ9P2R6 1566 aa17.41■□□□□ 0.38
SIN3A-204ENST00000562776 FBXO41Q8TF61 875 aa17.4■□□□□ 0.38
SIN3A-204ENST00000562776 GPATCH8Q9UKJ3 1502 aaKnown RBP17.4■□□□□ 0.38
SIN3A-204ENST00000562776 TIAM1Q13009 1591 aa17.4■□□□□ 0.38
SIN3A-204ENST00000562776 FER1L4A9Z1Z3 1794 aa17.39■□□□□ 0.37
SIN3A-204ENST00000562776 ABCC1P33527 1531 aa17.39■□□□□ 0.37
SIN3A-204ENST00000562776 TRAPPC8Q9Y2L5 1435 aa17.38■□□□□ 0.37
SIN3A-204ENST00000562776 HSPA2P54652 639 aa17.38■□□□□ 0.37
SIN3A-204ENST00000562776 CCNB3Q8WWL7 1395 aa17.38■□□□□ 0.37
SIN3A-204ENST00000562776 DIP2CQ9Y2E4 1556 aa17.37■□□□□ 0.37
SIN3A-204ENST00000562776 AGLP35573 1532 aa17.37■□□□□ 0.37
SIN3A-204ENST00000562776 ITSN2Q9NZM3 1697 aa17.36■□□□□ 0.37
SIN3A-204ENST00000562776 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
SIN3A-204ENST00000562776 MYT1LQ9UL68 1186 aa17.35■□□□□ 0.37
SIN3A-204ENST00000562776 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
SIN3A-204ENST00000562776 MAP3K1Q13233 1512 aa17.34■□□□□ 0.37
SIN3A-204ENST00000562776 CEBPAP49715 358 aaPredicted RBP17.33■□□□□ 0.36
SIN3A-204ENST00000562776 SUPT6HQ7KZ85 1726 aaKnown RBP17.33■□□□□ 0.36
SIN3A-204ENST00000562776 ABCA6Q8N139 1617 aa17.32■□□□□ 0.36
SIN3A-204ENST00000562776 KIAA1107Q9UPP5 1409 aa17.32■□□□□ 0.36
SIN3A-204ENST00000562776 CFDP1Q9UEE9 299 aaPredicted RBP17.32■□□□□ 0.36
SIN3A-204ENST00000562776 SYCP2Q9BX26 1530 aa17.31■□□□□ 0.36
SIN3A-204ENST00000562776 NCOA2Q15596 1464 aa17.31■□□□□ 0.36
SIN3A-204ENST00000562776 LRRC9Q6ZRR7 1453 aa17.31■□□□□ 0.36
SIN3A-204ENST00000562776 ZNF777Q9ULD5 760 aaPredicted RBP17.31■□□□□ 0.36
SIN3A-204ENST00000562776 SETD1BQ9UPS6 1966 aaKnown RBP17.31■□□□□ 0.36
SIN3A-204ENST00000562776 PLEKHH2Q8IVE3 1493 aa17.31■□□□□ 0.36
SIN3A-204ENST00000562776 KIDINS220Q9ULH0 1771 aa17.3■□□□□ 0.36
SIN3A-204ENST00000562776 PREX1Q8TCU6 1659 aa17.29■□□□□ 0.36
SIN3A-204ENST00000562776 HNRNPMP52272 730 aaKnown RBP eCLIP17.27■□□□□ 0.36
SIN3A-204ENST00000562776 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
SIN3A-204ENST00000562776 ESF1Q9H501 851 aaKnown RBP17.26■□□□□ 0.35
SIN3A-204ENST00000562776 DMRT2Q9Y5R5 561 aa17.26■□□□□ 0.35
SIN3A-204ENST00000562776 CNTLNQ9NXG0 1405 aa17.26■□□□□ 0.35
SIN3A-204ENST00000562776 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
SIN3A-204ENST00000562776 KANK4Q5T7N3 995 aaPredicted RBP17.25■□□□□ 0.35
SIN3A-204ENST00000562776 ZNF644Q9H582 1327 aaPredicted RBP17.22■□□□□ 0.35
SIN3A-204ENST00000562776 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
SIN3A-204ENST00000562776 C3P01024 1663 aa17.22■□□□□ 0.35
SIN3A-204ENST00000562776 INO80Q9ULG1 1556 aaPredicted RBP17.21■□□□□ 0.35
SIN3A-204ENST00000562776 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
SIN3A-204ENST00000562776 MBD5Q9P267 1494 aa17.21■□□□□ 0.35
SIN3A-204ENST00000562776 APLP2Q06481 763 aa17.21■□□□□ 0.35
SIN3A-204ENST00000562776 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
SIN3A-204ENST00000562776 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
SIN3A-204ENST00000562776 STRCQ7RTU9 1775 aa17.19■□□□□ 0.34
SIN3A-204ENST00000562776 NPATQ14207 1427 aa17.19■□□□□ 0.34
SIN3A-204ENST00000562776 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
SIN3A-204ENST00000562776 PLXNC1O60486 1568 aa17.18■□□□□ 0.34
SIN3A-204ENST00000562776 A2MP01023 1474 aa17.18■□□□□ 0.34
SIN3A-204ENST00000562776 RTEL1-TNFRSF6BF6WH68 1400 aa17.17■□□□□ 0.34
SIN3A-204ENST00000562776 PTPRTO14522 1441 aa17.17■□□□□ 0.34
SIN3A-204ENST00000562776 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
SIN3A-204ENST00000562776 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
SIN3A-204ENST00000562776 RSPH4AQ5TD94 716 aa17.16■□□□□ 0.34
SIN3A-204ENST00000562776 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SIN3A-204ENST00000562776 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
SIN3A-204ENST00000562776 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
SIN3A-204ENST00000562776 DHX29Q7Z478 1369 aaKnown RBP17.11■□□□□ 0.33
SIN3A-204ENST00000562776 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
SIN3A-204ENST00000562776 GGT6Q6P531 493 aa17.1■□□□□ 0.33
SIN3A-204ENST00000562776 NCOA1Q15788 1441 aa17.1■□□□□ 0.33
SIN3A-204ENST00000562776 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
SIN3A-204ENST00000562776 CLTCQ00610 1675 aaKnown RBP17.06■□□□□ 0.32
SIN3A-204ENST00000562776 PTPN23Q9H3S7 1636 aa17.06■□□□□ 0.32
SIN3A-204ENST00000562776 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
SIN3A-204ENST00000562776 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
SIN3A-204ENST00000562776 TSPY4P0CV99 314 aa17.04■□□□□ 0.32
SIN3A-204ENST00000562776 TSPY10P0CW01 314 aa17.04■□□□□ 0.32
SIN3A-204ENST00000562776 CAMSAP1Q5T5Y3 1602 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms