RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 EFCAB5A4FU69 1503 aa19.61■□□□□ 0.73
NSMCE1-202ENST00000561960 ZMYM4Q5VZL5 1548 aa19.61■□□□□ 0.73
NSMCE1-202ENST00000561960 EEA1Q15075 1411 aa19.57■□□□□ 0.72
NSMCE1-202ENST00000561960 SCAPERQ9BY12 1400 aa19.57■□□□□ 0.72
NSMCE1-202ENST00000561960 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
NSMCE1-202ENST00000561960 CEBPAP49715 358 aaPredicted RBP19.53■□□□□ 0.72
NSMCE1-202ENST00000561960 UBTFP17480 764 aaKnown RBP19.52■□□□□ 0.72
NSMCE1-202ENST00000561960 PREX1Q8TCU6 1659 aa19.5■□□□□ 0.71
NSMCE1-202ENST00000561960 PLCH2O75038 1416 aa19.5■□□□□ 0.71
NSMCE1-202ENST00000561960 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
NSMCE1-202ENST00000561960 ARHGAP5Q13017 1502 aa19.48■□□□□ 0.71
NSMCE1-202ENST00000561960 MYT1LQ9UL68 1186 aa19.48■□□□□ 0.71
NSMCE1-202ENST00000561960 CDC42BPBQ9Y5S2 1711 aa19.48■□□□□ 0.71
NSMCE1-202ENST00000561960 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
NSMCE1-202ENST00000561960 STRCQ7RTU9 1775 aa19.46■□□□□ 0.71
NSMCE1-202ENST00000561960 ATP10AO60312 1499 aa19.46■□□□□ 0.71
NSMCE1-202ENST00000561960 MAGI2Q86UL8 1455 aa19.46■□□□□ 0.71
NSMCE1-202ENST00000561960 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
NSMCE1-202ENST00000561960 AFAP1Q8N556 730 aa19.44■□□□□ 0.7
NSMCE1-202ENST00000561960 ABCA6Q8N139 1617 aa19.43■□□□□ 0.7
NSMCE1-202ENST00000561960 DIP2CQ9Y2E4 1556 aa19.42■□□□□ 0.7
NSMCE1-202ENST00000561960 CERKQ8TCT0 537 aa19.42■□□□□ 0.7
NSMCE1-202ENST00000561960 C3P01024 1663 aa19.41■□□□□ 0.7
NSMCE1-202ENST00000561960 EFCAB2Q5VUJ9 269 aa19.41■□□□□ 0.7
NSMCE1-202ENST00000561960 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
NSMCE1-202ENST00000561960 KDM5CP41229 1560 aa19.38■□□□□ 0.69
NSMCE1-202ENST00000561960 ZNF518AQ6AHZ1 1483 aa19.38■□□□□ 0.69
NSMCE1-202ENST00000561960 ITSN2Q9NZM3 1697 aa19.38■□□□□ 0.69
NSMCE1-202ENST00000561960 PREX2Q70Z35 1606 aa19.37■□□□□ 0.69
NSMCE1-202ENST00000561960 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
NSMCE1-202ENST00000561960 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
NSMCE1-202ENST00000561960 CLIP1P30622 1438 aa19.34■□□□□ 0.69
NSMCE1-202ENST00000561960 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
NSMCE1-202ENST00000561960 CDK11AQ9UQ88 783 aaPredicted RBP19.33■□□□□ 0.68
NSMCE1-202ENST00000561960 KIDINS220Q9ULH0 1771 aa19.32■□□□□ 0.68
NSMCE1-202ENST00000561960 ABCC1P33527 1531 aa19.31■□□□□ 0.68
NSMCE1-202ENST00000561960 UHRF1BP1Q6BDS2 1440 aa19.31■□□□□ 0.68
NSMCE1-202ENST00000561960 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
NSMCE1-202ENST00000561960 SETD1BQ9UPS6 1966 aaKnown RBP19.3■□□□□ 0.68
NSMCE1-202ENST00000561960 CHIC1Q5VXU3 224 aa19.29■□□□□ 0.68
NSMCE1-202ENST00000561960 ZNF777Q9ULD5 760 aaPredicted RBP19.27■□□□□ 0.68
NSMCE1-202ENST00000561960 ILDR2Q71H61 639 aa19.25■□□□□ 0.67
NSMCE1-202ENST00000561960 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
NSMCE1-202ENST00000561960 REREQ9P2R6 1566 aa19.24■□□□□ 0.67
NSMCE1-202ENST00000561960 DISP3Q9P2K9 1392 aa19.24■□□□□ 0.67
NSMCE1-202ENST00000561960 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
NSMCE1-202ENST00000561960 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
NSMCE1-202ENST00000561960 CLTCQ00610 1675 aaKnown RBP19.23■□□□□ 0.67
NSMCE1-202ENST00000561960 MLH3Q9UHC1 1453 aa19.22■□□□□ 0.67
NSMCE1-202ENST00000561960 CASKIN1Q8WXD9 1431 aa19.21■□□□□ 0.67
NSMCE1-202ENST00000561960 CCDC18Q5T9S5 1454 aa19.2■□□□□ 0.66
NSMCE1-202ENST00000561960 HNRNPMP52272 730 aaKnown RBP eCLIP19.18■□□□□ 0.66
NSMCE1-202ENST00000561960 CAMSAP1Q5T5Y3 1602 aa19.18■□□□□ 0.66
NSMCE1-202ENST00000561960 AGLP35573 1532 aa19.17■□□□□ 0.66
NSMCE1-202ENST00000561960 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
NSMCE1-202ENST00000561960 LTBP4Q8N2S1 1624 aa19.16■□□□□ 0.66
NSMCE1-202ENST00000561960 DMRT2Q9Y5R5 561 aa19.15■□□□□ 0.66
NSMCE1-202ENST00000561960 MROH2AA6NES4 1674 aa19.14■□□□□ 0.66
NSMCE1-202ENST00000561960 NCKAP5LQ9HCH0 1330 aa19.14■□□□□ 0.65
NSMCE1-202ENST00000561960 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
NSMCE1-202ENST00000561960 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
NSMCE1-202ENST00000561960 MYO3AQ8NEV4 1616 aa19.13■□□□□ 0.65
NSMCE1-202ENST00000561960 ATP7AQ04656 1500 aa19.12■□□□□ 0.65
NSMCE1-202ENST00000561960 GPATCH8Q9UKJ3 1502 aaKnown RBP19.12■□□□□ 0.65
NSMCE1-202ENST00000561960 PTPRTO14522 1441 aa19.12■□□□□ 0.65
NSMCE1-202ENST00000561960 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
NSMCE1-202ENST00000561960 SPAG9O60271 1321 aaKnown RBP19.11■□□□□ 0.65
NSMCE1-202ENST00000561960 ZNF335Q9H4Z2 1342 aaPredicted RBP19.08■□□□□ 0.65
NSMCE1-202ENST00000561960 ZMYM3Q14202 1370 aa19.07■□□□□ 0.64
NSMCE1-202ENST00000561960 GGT6Q6P531 493 aa19.07■□□□□ 0.64
NSMCE1-202ENST00000561960 ZNF142P52746 1687 aaPredicted RBP19.07■□□□□ 0.64
NSMCE1-202ENST00000561960 CNTLNQ9NXG0 1405 aa19.07■□□□□ 0.64
NSMCE1-202ENST00000561960 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
NSMCE1-202ENST00000561960 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
NSMCE1-202ENST00000561960 CEP170BQ9Y4F5 1589 aaPredicted RBP19.05■□□□□ 0.64
NSMCE1-202ENST00000561960 ADGBQ8N7X0 1667 aa19.05■□□□□ 0.64
NSMCE1-202ENST00000561960 A2MP01023 1474 aa19.04■□□□□ 0.64
NSMCE1-202ENST00000561960 CFDP1Q9UEE9 299 aaPredicted RBP19.04■□□□□ 0.64
NSMCE1-202ENST00000561960 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
NSMCE1-202ENST00000561960 TIAM1Q13009 1591 aa19.03■□□□□ 0.64
NSMCE1-202ENST00000561960 NPATQ14207 1427 aa19■□□□□ 0.63
NSMCE1-202ENST00000561960 MTUS2Q5JR59 1369 aa19■□□□□ 0.63
NSMCE1-202ENST00000561960 PTPRKQ15262 1439 aa19■□□□□ 0.63
NSMCE1-202ENST00000561960 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
NSMCE1-202ENST00000561960 SOCS7O14512 581 aa18.99■□□□□ 0.63
NSMCE1-202ENST00000561960 POLR1AO95602 1720 aaPredicted RBP18.98■□□□□ 0.63
NSMCE1-202ENST00000561960 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
NSMCE1-202ENST00000561960 DNMT1P26358 1616 aaKnown RBP18.96■□□□□ 0.63
NSMCE1-202ENST00000561960 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
NSMCE1-202ENST00000561960 KIAA1107Q9UPP5 1409 aa18.93■□□□□ 0.62
NSMCE1-202ENST00000561960 FBXO31Q5XUX0 539 aaPredicted RBP18.93■□□□□ 0.62
NSMCE1-202ENST00000561960 TCOF1Q13428 1488 aaKnown RBP18.92■□□□□ 0.62
NSMCE1-202ENST00000561960 IQSEC2Q5JU85 1478 aa18.92■□□□□ 0.62
NSMCE1-202ENST00000561960 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
NSMCE1-202ENST00000561960 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
NSMCE1-202ENST00000561960 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
NSMCE1-202ENST00000561960 PIP4K2BP78356 416 aa18.91■□□□□ 0.62
NSMCE1-202ENST00000561960 PPP6R1Q9UPN7 881 aa18.9■□□□□ 0.62
NSMCE1-202ENST00000561960 PLA2R1Q13018 1463 aa18.9■□□□□ 0.62
NSMCE1-202ENST00000561960 MBD5Q9P267 1494 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms