RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
VAC14-203ENST00000561879 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
VAC14-203ENST00000561879 ARID3CA6NKF2 412 aa16.05■□□□□ 0.16
VAC14-203ENST00000561879 ARHGEF11O15085 1522 aa16.04■□□□□ 0.16
VAC14-203ENST00000561879 KDM5BQ9UGL1 1544 aa16.04■□□□□ 0.16
VAC14-203ENST00000561879 TROQ12816 1431 aaPredicted RBP16.04■□□□□ 0.16
VAC14-203ENST00000561879 MAGI3Q5TCQ9 1506 aa16.04■□□□□ 0.16
VAC14-203ENST00000561879 RRBP1Q9P2E9 1410 aaKnown RBP16.02■□□□□ 0.15
VAC14-203ENST00000561879 PROM2Q8N271 834 aa16.01■□□□□ 0.15
VAC14-203ENST00000561879 NCOA2Q15596 1464 aa16.01■□□□□ 0.15
VAC14-203ENST00000561879 PHLDB1Q86UU1 1377 aa16■□□□□ 0.15
VAC14-203ENST00000561879 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
VAC14-203ENST00000561879 CCNB3Q8WWL7 1395 aa15.98■□□□□ 0.15
VAC14-203ENST00000561879 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.98■□□□□ 0.15
VAC14-203ENST00000561879 NPM1P06748 294 aaKnown RBP eCLIP15.97■□□□□ 0.15
VAC14-203ENST00000561879 ADCY10Q96PN6 1610 aa15.97■□□□□ 0.15
VAC14-203ENST00000561879 FBXO3Q9UK99 471 aa15.96■□□□□ 0.15
VAC14-203ENST00000561879 MYOM3Q5VTT5 1437 aa15.95■□□□□ 0.14
VAC14-203ENST00000561879 ABCB7O75027 752 aa15.95■□□□□ 0.14
VAC14-203ENST00000561879 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
VAC14-203ENST00000561879 RIMBP3CA6NJZ7 1639 aa15.94■□□□□ 0.14
VAC14-203ENST00000561879 RIMBP3BA6NNM3 1639 aa15.94■□□□□ 0.14
VAC14-203ENST00000561879 RIMBP3Q9UFD9 1639 aa15.94■□□□□ 0.14
VAC14-203ENST00000561879 CYB5RLQ6IPT4 315 aa15.93■□□□□ 0.14
VAC14-203ENST00000561879 ZCCHC11Q5TAX3 1644 aaKnown RBP15.93■□□□□ 0.14
VAC14-203ENST00000561879 FGD6Q6ZV73 1430 aa15.93■□□□□ 0.14
VAC14-203ENST00000561879 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
VAC14-203ENST00000561879 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
VAC14-203ENST00000561879 KIF14Q15058 1648 aa15.89■□□□□ 0.13
VAC14-203ENST00000561879 GPATCH8Q9UKJ3 1502 aaKnown RBP15.89■□□□□ 0.13
VAC14-203ENST00000561879 WDR7Q9Y4E6 1490 aa15.87■□□□□ 0.13
VAC14-203ENST00000561879 TCOF1Q13428 1488 aaKnown RBP15.86■□□□□ 0.13
VAC14-203ENST00000561879 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
VAC14-203ENST00000561879 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
VAC14-203ENST00000561879 FAM50AQ14320 339 aaKnown RBP15.85■□□□□ 0.13
VAC14-203ENST00000561879 KCNH8Q96L42 1107 aa15.85■□□□□ 0.13
VAC14-203ENST00000561879 SLC24A1O60721 1099 aa15.83■□□□□ 0.12
VAC14-203ENST00000561879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.82■□□□□ 0.12
VAC14-203ENST00000561879 PTPN23Q9H3S7 1636 aa15.81■□□□□ 0.12
VAC14-203ENST00000561879 ITSN2Q9NZM3 1697 aa15.8■□□□□ 0.12
VAC14-203ENST00000561879 MAPKBP1O60336 1514 aa15.8■□□□□ 0.12
VAC14-203ENST00000561879 DSG3P32926 999 aa15.8■□□□□ 0.12
VAC14-203ENST00000561879 PLCH2O75038 1416 aa15.79■□□□□ 0.12
VAC14-203ENST00000561879 RSPH4AQ5TD94 716 aa15.78■□□□□ 0.12
VAC14-203ENST00000561879 VASPP50552 380 aaPredicted RBP15.77■□□□□ 0.12
VAC14-203ENST00000561879 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
VAC14-203ENST00000561879 ARAP3Q8WWN8 1544 aa15.77■□□□□ 0.11
VAC14-203ENST00000561879 DNAJC5Q9H3Z4 198 aa15.76■□□□□ 0.11
VAC14-203ENST00000561879 ZNF644Q9H582 1327 aaPredicted RBP15.75■□□□□ 0.11
VAC14-203ENST00000561879 CDC42BPAQ5VT25 1732 aa15.75■□□□□ 0.11
VAC14-203ENST00000561879 TTC37Q6PGP7 1564 aa15.75■□□□□ 0.11
VAC14-203ENST00000561879 HRCP23327 699 aa15.74■□□□□ 0.11
VAC14-203ENST00000561879 ITGAEP38570 1179 aa15.74■□□□□ 0.11
VAC14-203ENST00000561879 ABCA9Q8IUA7 1624 aa15.74■□□□□ 0.11
VAC14-203ENST00000561879 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
VAC14-203ENST00000561879 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
VAC14-203ENST00000561879 PREX2Q70Z35 1606 aa15.73■□□□□ 0.11
VAC14-203ENST00000561879 ZNF777Q9ULD5 760 aaPredicted RBP15.73■□□□□ 0.11
VAC14-203ENST00000561879 KIAA1107Q9UPP5 1409 aa15.73■□□□□ 0.11
VAC14-203ENST00000561879 ABCC5O15440 1437 aa15.71■□□□□ 0.11
VAC14-203ENST00000561879 PTPRKQ15262 1439 aa15.71■□□□□ 0.11
VAC14-203ENST00000561879 ARHGAP5Q13017 1502 aa15.7■□□□□ 0.1
VAC14-203ENST00000561879 MYO5CQ9NQX4 1742 aa15.7■□□□□ 0.1
VAC14-203ENST00000561879 CDC42BPBQ9Y5S2 1711 aa15.7■□□□□ 0.1
VAC14-203ENST00000561879 DAPK1P53355 1430 aa15.69■□□□□ 0.1
VAC14-203ENST00000561879 ROCK1Q13464 1354 aa15.69■□□□□ 0.1
VAC14-203ENST00000561879 MBD5Q9P267 1494 aa15.69■□□□□ 0.1
VAC14-203ENST00000561879 GLI2P10070 1586 aa15.69■□□□□ 0.1
VAC14-203ENST00000561879 CD109Q6YHK3 1445 aa15.68■□□□□ 0.1
VAC14-203ENST00000561879 AKNAQ7Z591 1439 aa15.68■□□□□ 0.1
VAC14-203ENST00000561879 DNMT1P26358 1616 aaKnown RBP15.68■□□□□ 0.1
VAC14-203ENST00000561879 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
VAC14-203ENST00000561879 TSPY4P0CV99 314 aa15.67■□□□□ 0.1
VAC14-203ENST00000561879 TSPY10P0CW01 314 aa15.67■□□□□ 0.1
VAC14-203ENST00000561879 HFM1A2PYH4 1435 aa15.67■□□□□ 0.1
VAC14-203ENST00000561879 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
VAC14-203ENST00000561879 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
VAC14-203ENST00000561879 HNRNPMP52272 730 aaKnown RBP eCLIP15.66■□□□□ 0.1
VAC14-203ENST00000561879 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
VAC14-203ENST00000561879 FANCAO15360 1455 aa15.65■□□□□ 0.1
VAC14-203ENST00000561879 SHANK2Q9UPX8 1470 aa15.64■□□□□ 0.09
VAC14-203ENST00000561879 FAM69CQ0P6D2 419 aa15.63■□□□□ 0.09
VAC14-203ENST00000561879 IFNLR1Q8IU57 520 aaPredicted RBP15.62■□□□□ 0.09
VAC14-203ENST00000561879 ADGRL2O95490 1459 aa15.62■□□□□ 0.09
VAC14-203ENST00000561879 CCDC141Q6ZP82 1450 aa15.62■□□□□ 0.09
VAC14-203ENST00000561879 NAIPQ13075 1403 aa15.61■□□□□ 0.09
VAC14-203ENST00000561879 NCOA1Q15788 1441 aa15.61■□□□□ 0.09
VAC14-203ENST00000561879 CHIC2Q9UKJ5 165 aa15.61■□□□□ 0.09
VAC14-203ENST00000561879 ANKRD30AQ9BXX3 1397 aa15.61■□□□□ 0.09
VAC14-203ENST00000561879 RAB3GAP2Q9H2M9 1393 aa15.61■□□□□ 0.09
VAC14-203ENST00000561879 NEO1Q92859 1461 aa15.6■□□□□ 0.09
VAC14-203ENST00000561879 ABCC1P33527 1531 aa15.6■□□□□ 0.09
VAC14-203ENST00000561879 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
VAC14-203ENST00000561879 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
VAC14-203ENST00000561879 MAP3K4Q9Y6R4 1608 aa15.59■□□□□ 0.09
VAC14-203ENST00000561879 ZNF692Q9BU19 519 aaPredicted RBP15.59■□□□□ 0.09
VAC14-203ENST00000561879 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
VAC14-203ENST00000561879 SYCP2Q9BX26 1530 aa15.58■□□□□ 0.09
VAC14-203ENST00000561879 RRP7BPQ9NSQ0 103 aa15.58■□□□□ 0.08
VAC14-203ENST00000561879 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms