RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 FOXD1Q16676 465 aa15.3■□□□□ 0.04
NEIL1-202ENST00000561643 HSPA5P11021 654 aaKnown RBP15.3■□□□□ 0.04
NEIL1-202ENST00000561643 DAPK1P53355 1430 aa15.29■□□□□ 0.04
NEIL1-202ENST00000561643 NUP153P49790 1475 aaKnown RBP15.29■□□□□ 0.04
NEIL1-202ENST00000561643 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
NEIL1-202ENST00000561643 ZNF644Q9H582 1327 aaPredicted RBP15.28■□□□□ 0.04
NEIL1-202ENST00000561643 NEFLP07196 543 aa15.28■□□□□ 0.04
NEIL1-202ENST00000561643 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEIL1-202ENST00000561643 RBM19Q9Y4C8 960 aaKnown RBP15.28■□□□□ 0.04
NEIL1-202ENST00000561643 L3MBTL2Q969R5 705 aa15.27■□□□□ 0.04
NEIL1-202ENST00000561643 ROCK1Q13464 1354 aa15.27■□□□□ 0.03
NEIL1-202ENST00000561643 ABCC5O15440 1437 aa15.26■□□□□ 0.03
NEIL1-202ENST00000561643 WASHC2AQ641Q2 1341 aa15.26■□□□□ 0.03
NEIL1-202ENST00000561643 RAPGEF6Q8TEU7 1601 aa15.25■□□□□ 0.03
NEIL1-202ENST00000561643 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
NEIL1-202ENST00000561643 EIF4G3O43432 1585 aaKnown RBP15.24■□□□□ 0.03
NEIL1-202ENST00000561643 SLC4A1APQ9BWU0 796 aaKnown RBP15.23■□□□□ 0.03
NEIL1-202ENST00000561643 DNMT1P26358 1616 aaKnown RBP15.23■□□□□ 0.03
NEIL1-202ENST00000561643 CCDC136Q96JN2 1154 aa15.23■□□□□ 0.03
NEIL1-202ENST00000561643 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
NEIL1-202ENST00000561643 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
NEIL1-202ENST00000561643 PRG4Q92954 1404 aaPredicted RBP15.22■□□□□ 0.03
NEIL1-202ENST00000561643 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
NEIL1-202ENST00000561643 HNRNPUQ00839 825 aaKnown RBP eCLIP15.19■□□□□ 0.02
NEIL1-202ENST00000561643 ZNF777Q9ULD5 760 aaPredicted RBP15.19■□□□□ 0.02
NEIL1-202ENST00000561643 RPRD2Q5VT52 1461 aaKnown RBP15.19■□□□□ 0.02
NEIL1-202ENST00000561643 MAGI1Q96QZ7 1491 aaPredicted RBP15.19■□□□□ 0.02
NEIL1-202ENST00000561643 PLB1Q6P1J6 1458 aa15.18■□□□□ 0.02
NEIL1-202ENST00000561643 MSH5O43196 834 aa15.18■□□□□ 0.02
NEIL1-202ENST00000561643 NBPF8Q3BBV2 869 aa15.17■□□□□ 0.02
NEIL1-202ENST00000561643 CAMSAP2Q08AD1 1489 aa15.17■□□□□ 0.02
NEIL1-202ENST00000561643 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
NEIL1-202ENST00000561643 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
NEIL1-202ENST00000561643 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
NEIL1-202ENST00000561643 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
NEIL1-202ENST00000561643 CCDC7Q96M83 1385 aa15.15■□□□□ 0.02
NEIL1-202ENST00000561643 TEX14Q8IWB6 1497 aa15.15■□□□□ 0.02
NEIL1-202ENST00000561643 C11orf95C9JLR9 678 aaPredicted RBP15.14■□□□□ 0.01
NEIL1-202ENST00000561643 GPATCH8Q9UKJ3 1502 aaKnown RBP15.14■□□□□ 0.01
NEIL1-202ENST00000561643 JPH4Q96JJ6 628 aa15.14■□□□□ 0.01
NEIL1-202ENST00000561643 NCOA1Q15788 1441 aa15.14■□□□□ 0.01
NEIL1-202ENST00000561643 ITSN2Q9NZM3 1697 aa15.13■□□□□ 0.01
NEIL1-202ENST00000561643 KIF14Q15058 1648 aa15.11■□□□□ 0.01
NEIL1-202ENST00000561643 PZPP20742 1482 aa15.11■□□□□ 0.01
NEIL1-202ENST00000561643 PLEKHD1A6NEE1 506 aa15.1■□□□□ 0.01
NEIL1-202ENST00000561643 ANKRD30AQ9BXX3 1397 aa15.1■□□□□ 0.01
NEIL1-202ENST00000561643 PRKRIP1Q9H875 184 aaPredicted RBP15.09■□□□□ 0.01
NEIL1-202ENST00000561643 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
NEIL1-202ENST00000561643 NUP160Q12769 1436 aa15.08■□□□□ 0.01
NEIL1-202ENST00000561643 CCDC184Q52MB2 194 aa15.08■□□□□ 0
NEIL1-202ENST00000561643 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
NEIL1-202ENST00000561643 PKD2Q13563 968 aa15.08■□□□□ 0
NEIL1-202ENST00000561643 ZNF326Q5BKZ1 582 aaKnown RBP15.08■□□□□ 0
NEIL1-202ENST00000561643 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
NEIL1-202ENST00000561643 ADCY10Q96PN6 1610 aa15.07■□□□□ 0
NEIL1-202ENST00000561643 ADGRL2O95490 1459 aa15.07■□□□□ 0
NEIL1-202ENST00000561643 KIAA1107Q9UPP5 1409 aa15.07■□□□□ 0
NEIL1-202ENST00000561643 MRS2Q9HD23 443 aa15.07■□□□□ 0
NEIL1-202ENST00000561643 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
NEIL1-202ENST00000561643 FAM9BQ8IZU0 186 aa15.06■□□□□ 0
NEIL1-202ENST00000561643 ANKRD50Q9ULJ7 1429 aa15.05■□□□□ 0
NEIL1-202ENST00000561643 CROCC2H7BZ55 1655 aa15.03■□□□□ -0
NEIL1-202ENST00000561643 POLR3GLQ9BT43 218 aa15.03■□□□□ -0
NEIL1-202ENST00000561643 IRX6P78412 446 aaPredicted RBP15.03■□□□□ -0
NEIL1-202ENST00000561643 TSPY4P0CV99 314 aa15.02□□□□□ -0.01
NEIL1-202ENST00000561643 TSPY10P0CW01 314 aa15.02□□□□□ -0.01
NEIL1-202ENST00000561643 NUP155O75694 1391 aa15.02□□□□□ -0.01
NEIL1-202ENST00000561643 ATP10BO94823 1461 aa15.02□□□□□ -0.01
NEIL1-202ENST00000561643 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
NEIL1-202ENST00000561643 ABCA8O94911 1581 aa15.01□□□□□ -0.01
NEIL1-202ENST00000561643 USP47Q96K76 1375 aa15.01□□□□□ -0.01
NEIL1-202ENST00000561643 ZBTB4Q9P1Z0 1013 aaPredicted RBP15□□□□□ -0.01
NEIL1-202ENST00000561643 MBD5Q9P267 1494 aa15□□□□□ -0.01
NEIL1-202ENST00000561643 ABCC10Q5T3U5 1492 aa15□□□□□ -0.01
NEIL1-202ENST00000561643 CNGB1Q14028 1251 aaPredicted RBP14.99□□□□□ -0.01
NEIL1-202ENST00000561643 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
NEIL1-202ENST00000561643 SHANK2Q9UPX8 1470 aa14.98□□□□□ -0.01
NEIL1-202ENST00000561643 DEKP35659 375 aaKnown RBP14.98□□□□□ -0.01
NEIL1-202ENST00000561643 HNRNPMP52272 730 aaKnown RBP eCLIP14.97□□□□□ -0.01
NEIL1-202ENST00000561643 POLR1AO95602 1720 aaPredicted RBP14.97□□□□□ -0.01
NEIL1-202ENST00000561643 ZBED9Q6R2W3 1325 aa14.96□□□□□ -0.01
NEIL1-202ENST00000561643 KIF15Q9NS87 1388 aa14.96□□□□□ -0.02
NEIL1-202ENST00000561643 PTPRGP23470 1445 aa14.95□□□□□ -0.02
NEIL1-202ENST00000561643 FANCIQ9NVI1 1328 aa14.94□□□□□ -0.02
NEIL1-202ENST00000561643 CARD11Q9BXL7 1154 aa14.94□□□□□ -0.02
NEIL1-202ENST00000561643 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
NEIL1-202ENST00000561643 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
NEIL1-202ENST00000561643 DHX29Q7Z478 1369 aaKnown RBP14.92□□□□□ -0.02
NEIL1-202ENST00000561643 ARID4BQ4LE39 1312 aaPredicted RBP14.91□□□□□ -0.02
NEIL1-202ENST00000561643 UHRF1BP1Q6BDS2 1440 aa14.91□□□□□ -0.02
NEIL1-202ENST00000561643 BCORL1Q5H9F3 1711 aa14.91□□□□□ -0.02
NEIL1-202ENST00000561643 ERICH6BQ5W0A0 696 aa14.91□□□□□ -0.02
NEIL1-202ENST00000561643 KDM5CP41229 1560 aa14.91□□□□□ -0.02
NEIL1-202ENST00000561643 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
NEIL1-202ENST00000561643 DCAF11Q8TEB1 546 aa14.9□□□□□ -0.02
NEIL1-202ENST00000561643 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
NEIL1-202ENST00000561643 ARHGEF5Q12774 1597 aa14.89□□□□□ -0.03
NEIL1-202ENST00000561643 ARHGEF12Q9NZN5 1544 aa14.89□□□□□ -0.03
NEIL1-202ENST00000561643 PPP4R2Q9NY27 417 aa14.89□□□□□ -0.03
NEIL1-202ENST00000561643 CCDC141Q6ZP82 1450 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms