RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 ABCA9Q8IUA7 1624 aa12.38□□□□□ -0.43
ZEB1-223ENST00000561304 TEX14Q8IWB6 1497 aa12.38□□□□□ -0.43
ZEB1-223ENST00000561304 MAGI3Q5TCQ9 1506 aa12.37□□□□□ -0.43
ZEB1-223ENST00000561304 LRRIQ1Q96JM4 1722 aa12.36□□□□□ -0.43
ZEB1-223ENST00000561304 CD109Q6YHK3 1445 aa12.35□□□□□ -0.43
ZEB1-223ENST00000561304 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
ZEB1-223ENST00000561304 ARHGAP35Q9NRY4 1499 aa12.33□□□□□ -0.44
ZEB1-223ENST00000561304 CDK13Q14004 1512 aaKnown RBP12.31□□□□□ -0.44
ZEB1-223ENST00000561304 TTC37Q6PGP7 1564 aa12.3□□□□□ -0.44
ZEB1-223ENST00000561304 HECW1Q76N89 1606 aa12.29□□□□□ -0.44
ZEB1-223ENST00000561304 FRMPD1Q5SYB0 1578 aa12.29□□□□□ -0.44
ZEB1-223ENST00000561304 KDM4FA0A1W2PPD8 638 aa12.29□□□□□ -0.44
ZEB1-223ENST00000561304 UBTFP17480 764 aaKnown RBP12.28□□□□□ -0.44
ZEB1-223ENST00000561304 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.44
ZEB1-223ENST00000561304 ADGRL1O94910 1474 aa12.27□□□□□ -0.44
ZEB1-223ENST00000561304 ARAP3Q8WWN8 1544 aa12.26□□□□□ -0.45
ZEB1-223ENST00000561304 RICTORQ6R327 1708 aa12.25□□□□□ -0.45
ZEB1-223ENST00000561304 PCF11O94913 1555 aaKnown RBP12.25□□□□□ -0.45
ZEB1-223ENST00000561304 KIF14Q15058 1648 aa12.24□□□□□ -0.45
ZEB1-223ENST00000561304 SP7Q8TDD2 431 aaPredicted RBP12.24□□□□□ -0.45
ZEB1-223ENST00000561304 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
ZEB1-223ENST00000561304 FMN1Q68DA7 1419 aa12.23□□□□□ -0.45
ZEB1-223ENST00000561304 CFAP74Q9C0B2 1584 aa12.23□□□□□ -0.45
ZEB1-223ENST00000561304 NEO1Q92859 1461 aa12.22□□□□□ -0.45
ZEB1-223ENST00000561304 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
ZEB1-223ENST00000561304 RBM42Q9BTD8 480 aaKnown RBP12.19□□□□□ -0.46
ZEB1-223ENST00000561304 SIGLEC1Q9BZZ2 1709 aa12.19□□□□□ -0.46
ZEB1-223ENST00000561304 FANCAO15360 1455 aa12.18□□□□□ -0.46
ZEB1-223ENST00000561304 PLEKHD1A6NEE1 506 aa12.18□□□□□ -0.46
ZEB1-223ENST00000561304 CDC42BPBQ9Y5S2 1711 aa12.17□□□□□ -0.46
ZEB1-223ENST00000561304 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
ZEB1-223ENST00000561304 PHLDB1Q86UU1 1377 aa12.16□□□□□ -0.46
ZEB1-223ENST00000561304 RAPGEF3O95398 923 aa12.16□□□□□ -0.46
ZEB1-223ENST00000561304 ADAMTSL3P82987 1691 aa12.15□□□□□ -0.46
ZEB1-223ENST00000561304 BCORL1Q5H9F3 1711 aa12.15□□□□□ -0.46
ZEB1-223ENST00000561304 ZMYM4Q5VZL5 1548 aa12.15□□□□□ -0.46
ZEB1-223ENST00000561304 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-223ENST00000561304 AKNAQ7Z591 1439 aa12.15□□□□□ -0.47
ZEB1-223ENST00000561304 CDC42BPAQ5VT25 1732 aa12.14□□□□□ -0.47
ZEB1-223ENST00000561304 CASKIN1Q8WXD9 1431 aa12.14□□□□□ -0.47
ZEB1-223ENST00000561304 PREX2Q70Z35 1606 aa12.14□□□□□ -0.47
ZEB1-223ENST00000561304 TROQ12816 1431 aaPredicted RBP12.13□□□□□ -0.47
ZEB1-223ENST00000561304 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
ZEB1-223ENST00000561304 FYCO1Q9BQS8 1478 aa12.13□□□□□ -0.47
ZEB1-223ENST00000561304 PLCH2O75038 1416 aa12.12□□□□□ -0.47
ZEB1-223ENST00000561304 CLIP1P30622 1438 aa12.12□□□□□ -0.47
ZEB1-223ENST00000561304 DENND4BO75064 1496 aaPredicted RBP12.12□□□□□ -0.47
ZEB1-223ENST00000561304 CCDC18Q5T9S5 1454 aa12.12□□□□□ -0.47
ZEB1-223ENST00000561304 MADDQ8WXG6 1647 aa12.11□□□□□ -0.47
ZEB1-223ENST00000561304 HECW2Q9P2P5 1572 aa12.1□□□□□ -0.47
ZEB1-223ENST00000561304 ITSN2Q9NZM3 1697 aa12.1□□□□□ -0.47
ZEB1-223ENST00000561304 ZFYVE16Q7Z3T8 1539 aa12.09□□□□□ -0.47
ZEB1-223ENST00000561304 RIMS1Q86UR5 1692 aaKnown RBP12.09□□□□□ -0.47
ZEB1-223ENST00000561304 POGZQ7Z3K3 1410 aa12.09□□□□□ -0.47
ZEB1-223ENST00000561304 ARHGAP5Q13017 1502 aa12.09□□□□□ -0.47
ZEB1-223ENST00000561304 YEATS2Q9ULM3 1422 aa12.08□□□□□ -0.48
ZEB1-223ENST00000561304 SCAPERQ9BY12 1400 aa12.06□□□□□ -0.48
ZEB1-223ENST00000561304 ABCC1P33527 1531 aa12.06□□□□□ -0.48
ZEB1-223ENST00000561304 KDM5CP41229 1560 aa12.06□□□□□ -0.48
ZEB1-223ENST00000561304 FER1L4A9Z1Z3 1794 aa12.06□□□□□ -0.48
ZEB1-223ENST00000561304 ABCA6Q8N139 1617 aa12.05□□□□□ -0.48
ZEB1-223ENST00000561304 CEP162Q5TB80 1403 aa12.05□□□□□ -0.48
ZEB1-223ENST00000561304 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
ZEB1-223ENST00000561304 SAMD9LQ8IVG5 1584 aa12.03□□□□□ -0.48
ZEB1-223ENST00000561304 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
ZEB1-223ENST00000561304 PTPRMP28827 1452 aa12.03□□□□□ -0.48
ZEB1-223ENST00000561304 MAGI2Q86UL8 1455 aa12.03□□□□□ -0.48
ZEB1-223ENST00000561304 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
ZEB1-223ENST00000561304 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
ZEB1-223ENST00000561304 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
ZEB1-223ENST00000561304 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
ZEB1-223ENST00000561304 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.49
ZEB1-223ENST00000561304 ZNF518AQ6AHZ1 1483 aa12.02□□□□□ -0.49
ZEB1-223ENST00000561304 EFCAB2Q5VUJ9 269 aa12.01□□□□□ -0.49
ZEB1-223ENST00000561304 TIAM1Q13009 1591 aa12□□□□□ -0.49
ZEB1-223ENST00000561304 TRAPPC8Q9Y2L5 1435 aa11.99□□□□□ -0.49
ZEB1-223ENST00000561304 EHBP1L1Q8N3D4 1523 aa11.99□□□□□ -0.49
ZEB1-223ENST00000561304 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
ZEB1-223ENST00000561304 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
ZEB1-223ENST00000561304 ARID4BQ4LE39 1312 aaPredicted RBP11.98□□□□□ -0.49
ZEB1-223ENST00000561304 C9orf84Q5VXU9 1444 aa11.98□□□□□ -0.49
ZEB1-223ENST00000561304 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
ZEB1-223ENST00000561304 ATP10AO60312 1499 aa11.98□□□□□ -0.49
ZEB1-223ENST00000561304 REREQ9P2R6 1566 aa11.97□□□□□ -0.49
ZEB1-223ENST00000561304 AFAP1Q8N556 730 aa11.96□□□□□ -0.49
ZEB1-223ENST00000561304 MLH3Q9UHC1 1453 aa11.95□□□□□ -0.5
ZEB1-223ENST00000561304 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
ZEB1-223ENST00000561304 SUPT6HQ7KZ85 1726 aaKnown RBP11.95□□□□□ -0.5
ZEB1-223ENST00000561304 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
ZEB1-223ENST00000561304 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
ZEB1-223ENST00000561304 MTUS2Q5JR59 1369 aa11.93□□□□□ -0.5
ZEB1-223ENST00000561304 C3P01024 1663 aa11.92□□□□□ -0.5
ZEB1-223ENST00000561304 MLECQ14165 292 aa11.92□□□□□ -0.5
ZEB1-223ENST00000561304 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
ZEB1-223ENST00000561304 ADGBQ8N7X0 1667 aa11.91□□□□□ -0.5
ZEB1-223ENST00000561304 PREX1Q8TCU6 1659 aa11.91□□□□□ -0.5
ZEB1-223ENST00000561304 AGLP35573 1532 aa11.9□□□□□ -0.5
ZEB1-223ENST00000561304 CCNB3Q8WWL7 1395 aa11.9□□□□□ -0.5
ZEB1-223ENST00000561304 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
ZEB1-223ENST00000561304 VPS8Q8N3P4 1428 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms