RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GPATCH8Q9UKJ3 1502 aaKnown RBP24.21■■□□□ 1.47
SNRPA1-213ENST00000560856 ADGRL1O94910 1474 aa24.21■■□□□ 1.47
SNRPA1-213ENST00000560856 SCAPERQ9BY12 1400 aa24.21■■□□□ 1.47
SNRPA1-213ENST00000560856 PREX2Q70Z35 1606 aa24.21■■□□□ 1.47
SNRPA1-213ENST00000560856 CDC42BPAQ5VT25 1732 aa24.19■■□□□ 1.46
SNRPA1-213ENST00000560856 RICTORQ6R327 1708 aa24.19■■□□□ 1.46
SNRPA1-213ENST00000560856 MAP3K1Q13233 1512 aa24.19■■□□□ 1.46
SNRPA1-213ENST00000560856 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
SNRPA1-213ENST00000560856 KANK4Q5T7N3 995 aaPredicted RBP24.15■■□□□ 1.46
SNRPA1-213ENST00000560856 LRRC9Q6ZRR7 1453 aa24.14■■□□□ 1.46
SNRPA1-213ENST00000560856 KDM4FA0A1W2PPD8 638 aa24.14■■□□□ 1.45
SNRPA1-213ENST00000560856 CCNB3Q8WWL7 1395 aa24.14■■□□□ 1.45
SNRPA1-213ENST00000560856 ZMYM4Q5VZL5 1548 aa24.13■■□□□ 1.45
SNRPA1-213ENST00000560856 ARHGEF12Q9NZN5 1544 aa24.12■■□□□ 1.45
SNRPA1-213ENST00000560856 NCOA2Q15596 1464 aa24.11■■□□□ 1.45
SNRPA1-213ENST00000560856 ABCC1P33527 1531 aa24.1■■□□□ 1.45
SNRPA1-213ENST00000560856 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
SNRPA1-213ENST00000560856 CFDP1Q9UEE9 299 aaPredicted RBP24.09■■□□□ 1.45
SNRPA1-213ENST00000560856 SAMD9LQ8IVG5 1584 aa24.08■■□□□ 1.44
SNRPA1-213ENST00000560856 YEATS2Q9ULM3 1422 aa24.07■■□□□ 1.44
SNRPA1-213ENST00000560856 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
SNRPA1-213ENST00000560856 MAGI2Q86UL8 1455 aa24.07■■□□□ 1.44
SNRPA1-213ENST00000560856 ZNF777Q9ULD5 760 aaPredicted RBP24.06■■□□□ 1.44
SNRPA1-213ENST00000560856 SUPT6HQ7KZ85 1726 aaKnown RBP24.06■■□□□ 1.44
SNRPA1-213ENST00000560856 ZNF518AQ6AHZ1 1483 aa24.06■■□□□ 1.44
SNRPA1-213ENST00000560856 KDM5CP41229 1560 aa24.05■■□□□ 1.44
SNRPA1-213ENST00000560856 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
SNRPA1-213ENST00000560856 KIAA1107Q9UPP5 1409 aa24.03■■□□□ 1.44
SNRPA1-213ENST00000560856 ZNF644Q9H582 1327 aaPredicted RBP24.03■■□□□ 1.44
SNRPA1-213ENST00000560856 ITSN2Q9NZM3 1697 aa24.02■■□□□ 1.44
SNRPA1-213ENST00000560856 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
SNRPA1-213ENST00000560856 HNRNPMP52272 730 aaKnown RBP eCLIP24.01■■□□□ 1.43
SNRPA1-213ENST00000560856 APLP2Q06481 763 aa24■■□□□ 1.43
SNRPA1-213ENST00000560856 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
SNRPA1-213ENST00000560856 SYCP2Q9BX26 1530 aa23.99■■□□□ 1.43
SNRPA1-213ENST00000560856 MLH3Q9UHC1 1453 aa23.98■■□□□ 1.43
SNRPA1-213ENST00000560856 MBD5Q9P267 1494 aa23.96■■□□□ 1.43
SNRPA1-213ENST00000560856 AEBP2Q6ZN18 517 aaPredicted RBP23.96■■□□□ 1.43
SNRPA1-213ENST00000560856 ATP10AO60312 1499 aa23.94■■□□□ 1.42
SNRPA1-213ENST00000560856 HECW2Q9P2P5 1572 aa23.94■■□□□ 1.42
SNRPA1-213ENST00000560856 SIGLEC1Q9BZZ2 1709 aa23.93■■□□□ 1.42
SNRPA1-213ENST00000560856 MYOM3Q5VTT5 1437 aa23.91■■□□□ 1.42
SNRPA1-213ENST00000560856 KIDINS220Q9ULH0 1771 aa23.9■■□□□ 1.42
SNRPA1-213ENST00000560856 DIP2CQ9Y2E4 1556 aa23.9■■□□□ 1.42
SNRPA1-213ENST00000560856 CAMSAP2Q08AD1 1489 aa23.89■■□□□ 1.42
SNRPA1-213ENST00000560856 C9orf84Q5VXU9 1444 aa23.89■■□□□ 1.41
SNRPA1-213ENST00000560856 SPAG9O60271 1321 aaKnown RBP23.88■■□□□ 1.41
SNRPA1-213ENST00000560856 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
SNRPA1-213ENST00000560856 MIA2Q96PC5 1412 aa23.88■■□□□ 1.41
SNRPA1-213ENST00000560856 ABCA6Q8N139 1617 aa23.88■■□□□ 1.41
SNRPA1-213ENST00000560856 ADAMTSL3P82987 1691 aa23.87■■□□□ 1.41
SNRPA1-213ENST00000560856 MYT1LQ9UL68 1186 aa23.86■■□□□ 1.41
SNRPA1-213ENST00000560856 BCORL1Q5H9F3 1711 aa23.86■■□□□ 1.41
SNRPA1-213ENST00000560856 REREQ9P2R6 1566 aa23.84■■□□□ 1.41
SNRPA1-213ENST00000560856 INO80Q9ULG1 1556 aaPredicted RBP23.82■■□□□ 1.4
SNRPA1-213ENST00000560856 RSPH4AQ5TD94 716 aa23.82■■□□□ 1.4
SNRPA1-213ENST00000560856 ATP7AQ04656 1500 aa23.82■■□□□ 1.4
SNRPA1-213ENST00000560856 CCDC141Q6ZP82 1450 aa23.81■■□□□ 1.4
SNRPA1-213ENST00000560856 ARHGEF5Q12774 1597 aa23.8■■□□□ 1.4
SNRPA1-213ENST00000560856 RTEL1-TNFRSF6BF6WH68 1400 aa23.79■■□□□ 1.4
SNRPA1-213ENST00000560856 AGLP35573 1532 aa23.78■■□□□ 1.4
SNRPA1-213ENST00000560856 FGD6Q6ZV73 1430 aa23.77■■□□□ 1.4
SNRPA1-213ENST00000560856 MADDQ8WXG6 1647 aa23.77■■□□□ 1.4
SNRPA1-213ENST00000560856 MLECQ14165 292 aa23.76■■□□□ 1.39
SNRPA1-213ENST00000560856 PTPRMP28827 1452 aa23.74■■□□□ 1.39
SNRPA1-213ENST00000560856 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
SNRPA1-213ENST00000560856 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
SNRPA1-213ENST00000560856 A2MP01023 1474 aa23.72■■□□□ 1.39
SNRPA1-213ENST00000560856 PLXNC1O60486 1568 aa23.7■■□□□ 1.38
SNRPA1-213ENST00000560856 TSPY4P0CV99 314 aa23.7■■□□□ 1.38
SNRPA1-213ENST00000560856 TSPY10P0CW01 314 aa23.7■■□□□ 1.38
SNRPA1-213ENST00000560856 ABCC5O15440 1437 aa23.68■■□□□ 1.38
SNRPA1-213ENST00000560856 PPARGC1BQ86YN6 1023 aaKnown RBP23.68■■□□□ 1.38
SNRPA1-213ENST00000560856 DHX29Q7Z478 1369 aaKnown RBP23.67■■□□□ 1.38
SNRPA1-213ENST00000560856 MAST1Q9Y2H9 1570 aa23.67■■□□□ 1.38
SNRPA1-213ENST00000560856 RIMS1Q86UR5 1692 aaKnown RBP23.67■■□□□ 1.38
SNRPA1-213ENST00000560856 ADGBQ8N7X0 1667 aa23.66■■□□□ 1.38
SNRPA1-213ENST00000560856 FER1L4A9Z1Z3 1794 aa23.63■■□□□ 1.37
SNRPA1-213ENST00000560856 DAPK1P53355 1430 aa23.62■■□□□ 1.37
SNRPA1-213ENST00000560856 SHANK2Q9UPX8 1470 aa23.61■■□□□ 1.37
SNRPA1-213ENST00000560856 DNMT1P26358 1616 aaKnown RBP23.6■■□□□ 1.37
SNRPA1-213ENST00000560856 FAM50AQ14320 339 aaKnown RBP23.57■■□□□ 1.36
SNRPA1-213ENST00000560856 CROCC2H7BZ55 1655 aa23.57■■□□□ 1.36
SNRPA1-213ENST00000560856 CEBPAP49715 358 aaPredicted RBP23.56■■□□□ 1.36
SNRPA1-213ENST00000560856 KIF3BO15066 747 aa23.55■■□□□ 1.36
SNRPA1-213ENST00000560856 GGT6Q6P531 493 aa23.55■■□□□ 1.36
SNRPA1-213ENST00000560856 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
SNRPA1-213ENST00000560856 PPP6R1Q9UPN7 881 aa23.53■■□□□ 1.36
SNRPA1-213ENST00000560856 PLPPR3Q6T4P5 718 aa23.52■■□□□ 1.36
SNRPA1-213ENST00000560856 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
SNRPA1-213ENST00000560856 KIF15Q9NS87 1388 aa23.51■■□□□ 1.35
SNRPA1-213ENST00000560856 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
SNRPA1-213ENST00000560856 NCOA1Q15788 1441 aa23.5■■□□□ 1.35
SNRPA1-213ENST00000560856 ESF1Q9H501 851 aaKnown RBP23.5■■□□□ 1.35
SNRPA1-213ENST00000560856 RRP7BPQ9NSQ0 103 aa23.5■■□□□ 1.35
SNRPA1-213ENST00000560856 DUOX2Q9NRD8 1548 aa23.49■■□□□ 1.35
SNRPA1-213ENST00000560856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.49■■□□□ 1.35
SNRPA1-213ENST00000560856 ZMYM3Q14202 1370 aa23.48■■□□□ 1.35
SNRPA1-213ENST00000560856 ADGRL2O95490 1459 aa23.48■■□□□ 1.35
SNRPA1-213ENST00000560856 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms