RNA–Protein interactions for RNA: ENST00000560667.5

IDH3A-220, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 5

Gene IDH3A, Length 2,110 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-220ENST00000560667 MIA2Q96PC5 1412 aa11.14□□□□□ -0.63
IDH3A-220ENST00000560667 RAB3GAP2Q9H2M9 1393 aa11.14□□□□□ -0.63
IDH3A-220ENST00000560667 TTC37Q6PGP7 1564 aa11.14□□□□□ -0.63
IDH3A-220ENST00000560667 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.13□□□□□ -0.63
IDH3A-220ENST00000560667 TCOF1Q13428 1488 aaKnown RBP11.13□□□□□ -0.63
IDH3A-220ENST00000560667 ABCC5O15440 1437 aa11.13□□□□□ -0.63
IDH3A-220ENST00000560667 CDC42BPAQ5VT25 1732 aa11.13□□□□□ -0.63
IDH3A-220ENST00000560667 CAMSAP2Q08AD1 1489 aa11.11□□□□□ -0.63
IDH3A-220ENST00000560667 SETD5Q9C0A6 1442 aa11.11□□□□□ -0.63
IDH3A-220ENST00000560667 CDC42BPBQ9Y5S2 1711 aa11.1□□□□□ -0.63
IDH3A-220ENST00000560667 WDR7Q9Y4E6 1490 aa11.1□□□□□ -0.63
IDH3A-220ENST00000560667 KIF13AQ9H1H9 1805 aa11.09□□□□□ -0.63
IDH3A-220ENST00000560667 DAPK1P53355 1430 aa11.09□□□□□ -0.63
IDH3A-220ENST00000560667 AFAP1Q8N556 730 aa11.09□□□□□ -0.63
IDH3A-220ENST00000560667 MAPKBP1O60336 1514 aa11.09□□□□□ -0.63
IDH3A-220ENST00000560667 ARHGEF12Q9NZN5 1544 aa11.08□□□□□ -0.64
IDH3A-220ENST00000560667 PLCH2O75038 1416 aa11.08□□□□□ -0.64
IDH3A-220ENST00000560667 NAIPQ13075 1403 aa11.08□□□□□ -0.64
IDH3A-220ENST00000560667 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
IDH3A-220ENST00000560667 KDM6BO15054 1643 aa11.07□□□□□ -0.64
IDH3A-220ENST00000560667 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
IDH3A-220ENST00000560667 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
IDH3A-220ENST00000560667 ARHGAP5Q13017 1502 aa11.06□□□□□ -0.64
IDH3A-220ENST00000560667 SAMD9LQ8IVG5 1584 aa11.06□□□□□ -0.64
IDH3A-220ENST00000560667 DIP2BQ9P265 1576 aa11.05□□□□□ -0.64
IDH3A-220ENST00000560667 HFM1A2PYH4 1435 aa11.04□□□□□ -0.64
IDH3A-220ENST00000560667 TSPY4P0CV99 314 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 TSPY10P0CW01 314 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 FOXD1Q16676 465 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 NCOA1Q15788 1441 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 TRAPPC8Q9Y2L5 1435 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 PREX2Q70Z35 1606 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 ITSN2Q9NZM3 1697 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 AKNAQ7Z591 1439 aa11.03□□□□□ -0.64
IDH3A-220ENST00000560667 DNMT1P26358 1616 aaKnown RBP11.03□□□□□ -0.64
IDH3A-220ENST00000560667 TRIM52Q96A61 297 aa11.02□□□□□ -0.64
IDH3A-220ENST00000560667 SYCP2Q9BX26 1530 aa11.02□□□□□ -0.65
IDH3A-220ENST00000560667 CD109Q6YHK3 1445 aa11.02□□□□□ -0.65
IDH3A-220ENST00000560667 MYO5CQ9NQX4 1742 aa11.01□□□□□ -0.65
IDH3A-220ENST00000560667 RAPGEF3O95398 923 aa11□□□□□ -0.65
IDH3A-220ENST00000560667 ABCA9Q8IUA7 1624 aa11□□□□□ -0.65
IDH3A-220ENST00000560667 FANCAO15360 1455 aa11□□□□□ -0.65
IDH3A-220ENST00000560667 C9orf84Q5VXU9 1444 aa10.99□□□□□ -0.65
IDH3A-220ENST00000560667 NEUROD1Q13562 356 aa10.99□□□□□ -0.65
IDH3A-220ENST00000560667 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
IDH3A-220ENST00000560667 ROCK1Q13464 1354 aa10.98□□□□□ -0.65
IDH3A-220ENST00000560667 DENND4BO75064 1496 aaPredicted RBP10.97□□□□□ -0.65
IDH3A-220ENST00000560667 MPHOSPH9Q99550 1183 aa10.97□□□□□ -0.65
IDH3A-220ENST00000560667 KIAA1107Q9UPP5 1409 aa10.96□□□□□ -0.65
IDH3A-220ENST00000560667 KDM4FA0A1W2PPD8 638 aa10.96□□□□□ -0.65
IDH3A-220ENST00000560667 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
IDH3A-220ENST00000560667 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
IDH3A-220ENST00000560667 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.66
IDH3A-220ENST00000560667 RSPH4AQ5TD94 716 aa10.96□□□□□ -0.66
IDH3A-220ENST00000560667 TSPOAP1O95153 1857 aa10.95□□□□□ -0.66
IDH3A-220ENST00000560667 ZEB1P37275 1124 aaPredicted RBP10.95□□□□□ -0.66
IDH3A-220ENST00000560667 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
IDH3A-220ENST00000560667 SPAG9O60271 1321 aaKnown RBP10.95□□□□□ -0.66
IDH3A-220ENST00000560667 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.667e-8■■■■□ 25
IDH3A-220ENST00000560667 ADGRL1O94910 1474 aa10.94□□□□□ -0.66
IDH3A-220ENST00000560667 ABCC1P33527 1531 aa10.94□□□□□ -0.66
IDH3A-220ENST00000560667 ARHGEF5Q12774 1597 aa10.94□□□□□ -0.66
IDH3A-220ENST00000560667 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
IDH3A-220ENST00000560667 CROCC2H7BZ55 1655 aa10.93□□□□□ -0.66
IDH3A-220ENST00000560667 ADGRL2O95490 1459 aa10.93□□□□□ -0.66
IDH3A-220ENST00000560667 SLC4A1APQ9BWU0 796 aaKnown RBP10.92□□□□□ -0.66
IDH3A-220ENST00000560667 PLEKHH2Q8IVE3 1493 aa10.92□□□□□ -0.66
IDH3A-220ENST00000560667 GCC2Q8IWJ2 1684 aa10.91□□□□□ -0.66
IDH3A-220ENST00000560667 GLI2P10070 1586 aa10.9□□□□□ -0.66
IDH3A-220ENST00000560667 ARAP3Q8WWN8 1544 aa10.9□□□□□ -0.66
IDH3A-220ENST00000560667 NUP155O75694 1391 aa10.9□□□□□ -0.66
IDH3A-220ENST00000560667 SHANK2Q9UPX8 1470 aa10.9□□□□□ -0.67
IDH3A-220ENST00000560667 PKD2Q13563 968 aa10.89□□□□□ -0.67
IDH3A-220ENST00000560667 COL17A1Q9UMD9 1497 aaPredicted RBP10.89□□□□□ -0.67
IDH3A-220ENST00000560667 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
IDH3A-220ENST00000560667 ADGBQ8N7X0 1667 aa10.88□□□□□ -0.67
IDH3A-220ENST00000560667 PZPP20742 1482 aa10.88□□□□□ -0.67
IDH3A-220ENST00000560667 KIF3BO15066 747 aa10.87□□□□□ -0.67
IDH3A-220ENST00000560667 PPRC1Q5VV67 1664 aaKnown RBP10.86□□□□□ -0.67
IDH3A-220ENST00000560667 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
IDH3A-220ENST00000560667 CLSPNQ9HAW4 1339 aa10.85□□□□□ -0.67
IDH3A-220ENST00000560667 MAST1Q9Y2H9 1570 aa10.85□□□□□ -0.67
IDH3A-220ENST00000560667 ZFYVE16Q7Z3T8 1539 aa10.85□□□□□ -0.67
IDH3A-220ENST00000560667 POGZQ7Z3K3 1410 aa10.84□□□□□ -0.67
IDH3A-220ENST00000560667 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
IDH3A-220ENST00000560667 KIDINS220Q9ULH0 1771 aa10.84□□□□□ -0.67
IDH3A-220ENST00000560667 NEO1Q92859 1461 aa10.83□□□□□ -0.68
IDH3A-220ENST00000560667 RTEL1-TNFRSF6BF6WH68 1400 aa10.83□□□□□ -0.68
IDH3A-220ENST00000560667 ANKRD30BQ9BXX2 1392 aa10.83□□□□□ -0.68
IDH3A-220ENST00000560667 ATP7AQ04656 1500 aa10.83□□□□□ -0.68
IDH3A-220ENST00000560667 GGT6Q6P531 493 aa10.83□□□□□ -0.68
IDH3A-220ENST00000560667 ZNF518AQ6AHZ1 1483 aa10.82□□□□□ -0.68
IDH3A-220ENST00000560667 DHX29Q7Z478 1369 aaKnown RBP10.82□□□□□ -0.68
IDH3A-220ENST00000560667 DUOX2Q9NRD8 1548 aa10.81□□□□□ -0.68
IDH3A-220ENST00000560667 INO80Q9ULG1 1556 aaPredicted RBP10.81□□□□□ -0.68
IDH3A-220ENST00000560667 PLXNC1O60486 1568 aa10.8□□□□□ -0.68
IDH3A-220ENST00000560667 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
IDH3A-220ENST00000560667 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
IDH3A-220ENST00000560667 MLH3Q9UHC1 1453 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms