RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 PCF11O94913 1555 aaKnown RBP8.75□□□□□ -1.01
ZEB1-217ENST00000559858 FRAT2O75474 233 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-217ENST00000559858 SLC4A3P48751 1232 aa8.74□□□□□ -1.01
ZEB1-217ENST00000559858 L3MBTL2Q969R5 705 aa8.74□□□□□ -1.01
ZEB1-217ENST00000559858 RRP9O43818 475 aaKnown RBP8.74□□□□□ -1.01
ZEB1-217ENST00000559858 CUX1P39880 1505 aa8.74□□□□□ -1.01
ZEB1-217ENST00000559858 POLR1AO95602 1720 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-217ENST00000559858 HSP90AA2PQ14568 343 aaPredicted RBP8.74□□□□□ -1.01
ZEB1-217ENST00000559858 DHX29Q7Z478 1369 aaKnown RBP8.73□□□□□ -1.01
ZEB1-217ENST00000559858 TMC1Q8TDI8 760 aa8.73□□□□□ -1.01
ZEB1-217ENST00000559858 RRAGDQ9NQL2 400 aaPredicted RBP8.73□□□□□ -1.01
ZEB1-217ENST00000559858 L1TD1Q5T7N2 865 aaKnown RBP8.73□□□□□ -1.01
ZEB1-217ENST00000559858 SPATA31E1Q6ZUB1 1445 aa8.72□□□□□ -1.01
ZEB1-217ENST00000559858 FYCO1Q9BQS8 1478 aa8.72□□□□□ -1.01
ZEB1-217ENST00000559858 IGF1RP08069 1367 aa8.72□□□□□ -1.01
ZEB1-217ENST00000559858 HSP90AA1P07900 732 aaKnown RBP8.72□□□□□ -1.01
ZEB1-217ENST00000559858 PDE3BQ13370 1112 aa8.71□□□□□ -1.01
ZEB1-217ENST00000559858 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
ZEB1-217ENST00000559858 NAP1L5Q96NT1 182 aaPredicted RBP8.7□□□□□ -1.02
ZEB1-217ENST00000559858 CARMIL1Q5VZK9 1371 aa8.7□□□□□ -1.02
ZEB1-217ENST00000559858 NBPF8Q3BBV2 869 aa8.7□□□□□ -1.02
ZEB1-217ENST00000559858 LRPPRCP42704 1394 aaKnown RBP8.69□□□□□ -1.02
ZEB1-217ENST00000559858 PLPPR3Q6T4P5 718 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 P3H3Q8IVL6 736 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 PNNQ9H307 717 aaKnown RBP8.69□□□□□ -1.02
ZEB1-217ENST00000559858 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 SENP3-EIF4A1A0A087X0R7 540 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
ZEB1-217ENST00000559858 CNGB1Q14028 1251 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-217ENST00000559858 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-217ENST00000559858 DENND4BO75064 1496 aaPredicted RBP8.68□□□□□ -1.02
ZEB1-217ENST00000559858 MPHOSPH9Q99550 1183 aa8.68□□□□□ -1.02
ZEB1-217ENST00000559858 MIA2Q96PC5 1412 aa8.68□□□□□ -1.02
ZEB1-217ENST00000559858 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
ZEB1-217ENST00000559858 CLCN1P35523 988 aa8.67□□□□□ -1.02
ZEB1-217ENST00000559858 SENP3Q9H4L4 574 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-217ENST00000559858 BRD4O60885 1362 aaPredicted RBP8.67□□□□□ -1.02
ZEB1-217ENST00000559858 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
ZEB1-217ENST00000559858 MYOM3Q5VTT5 1437 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 CRBNQ96SW2 442 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 RRP7BPQ9NSQ0 103 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 POGKQ9P215 609 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 FHOD3Q2V2M9 1422 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 CENPQQ7L2Z9 268 aaPredicted RBP8.66□□□□□ -1.02
ZEB1-217ENST00000559858 SKAP1Q86WV1 359 aa8.66□□□□□ -1.02
ZEB1-217ENST00000559858 KTN1Q86UP2 1357 aaKnown RBP8.66□□□□□ -1.02
ZEB1-217ENST00000559858 C8orf34Q49A92 452 aa8.65□□□□□ -1.02
ZEB1-217ENST00000559858 ROCK2O75116 1388 aaKnown RBP8.65□□□□□ -1.02
ZEB1-217ENST00000559858 RPRD2Q5VT52 1461 aaKnown RBP8.65□□□□□ -1.03
ZEB1-217ENST00000559858 PABPN1Q86U42 306 aaKnown RBP eCLIP8.65□□□□□ -1.03
ZEB1-217ENST00000559858 KDM2BQ8NHM5 1336 aa8.64□□□□□ -1.03
ZEB1-217ENST00000559858 RALBP1Q15311 655 aa8.64□□□□□ -1.03
ZEB1-217ENST00000559858 POLR3GLQ9BT43 218 aa8.64□□□□□ -1.03
ZEB1-217ENST00000559858 EFCAB5A4FU69 1503 aa8.64□□□□□ -1.03
ZEB1-217ENST00000559858 MYBBP1AQ9BQG0 1328 aaKnown RBP8.64□□□□□ -1.03
ZEB1-217ENST00000559858 KIF15Q9NS87 1388 aa8.64□□□□□ -1.03
ZEB1-217ENST00000559858 TEX14Q8IWB6 1497 aa8.63□□□□□ -1.03
ZEB1-217ENST00000559858 ANKRD30BQ9BXX2 1392 aa8.63□□□□□ -1.03
ZEB1-217ENST00000559858 GCC2Q8IWJ2 1684 aa8.63□□□□□ -1.03
ZEB1-217ENST00000559858 PLIN1O60240 522 aa8.63□□□□□ -1.03
ZEB1-217ENST00000559858 BICRAQ9NZM4 1560 aa8.63□□□□□ -1.03
ZEB1-217ENST00000559858 CHIC2Q9UKJ5 165 aa8.62□□□□□ -1.03
ZEB1-217ENST00000559858 GOLGA6L3A6NEY3 463 aa8.61□□□□□ -1.03
ZEB1-217ENST00000559858 BECN1Q14457 450 aa8.61□□□□□ -1.03
ZEB1-217ENST00000559858 FOXD1Q16676 465 aa8.61□□□□□ -1.03
ZEB1-217ENST00000559858 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
ZEB1-217ENST00000559858 XRCC6P12956 609 aaKnown RBP eCLIP8.61□□□□□ -1.031e-8■■■■■ 35.6
ZEB1-217ENST00000559858 USP47Q96K76 1375 aa8.61□□□□□ -1.03
ZEB1-217ENST00000559858 BCORL1Q5H9F3 1711 aa8.6□□□□□ -1.03
ZEB1-217ENST00000559858 FSD2A1L4K1 749 aa8.6□□□□□ -1.03
ZEB1-217ENST00000559858 CDCA7LQ96GN5 454 aa8.6□□□□□ -1.03
ZEB1-217ENST00000559858 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
ZEB1-217ENST00000559858 SUPT6HQ7KZ85 1726 aaKnown RBP8.59□□□□□ -1.03
ZEB1-217ENST00000559858 TCOF1Q13428 1488 aaKnown RBP8.59□□□□□ -1.03
ZEB1-217ENST00000559858 TPM2P07951 284 aa8.59□□□□□ -1.03
ZEB1-217ENST00000559858 NLRP13Q86W25 1043 aa8.59□□□□□ -1.03
ZEB1-217ENST00000559858 PDCL3Q9H2J4 239 aa8.59□□□□□ -1.03
ZEB1-217ENST00000559858 KDM6BO15054 1643 aa8.58□□□□□ -1.04
ZEB1-217ENST00000559858 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
ZEB1-217ENST00000559858 INSRP06213 1382 aa8.57□□□□□ -1.04
ZEB1-217ENST00000559858 RGS3P49796 1198 aa8.57□□□□□ -1.04
ZEB1-217ENST00000559858 C20orf194Q5TEA3 1177 aa8.57□□□□□ -1.04
ZEB1-217ENST00000559858 EHBP1L1Q8N3D4 1523 aa8.57□□□□□ -1.04
ZEB1-217ENST00000559858 CFTRP13569 1480 aa8.57□□□□□ -1.04
ZEB1-217ENST00000559858 MRE11P49959 708 aa8.56□□□□□ -1.04
ZEB1-217ENST00000559858 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
ZEB1-217ENST00000559858 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
ZEB1-217ENST00000559858 ESPNB1AK53 854 aa8.56□□□□□ -1.04
ZEB1-217ENST00000559858 ANTXR1Q9H6X2 564 aa8.56□□□□□ -1.04
ZEB1-217ENST00000559858 USP19O94966 1318 aa8.55□□□□□ -1.04
ZEB1-217ENST00000559858 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-217ENST00000559858 PANK2Q9BZ23 570 aa8.55□□□□□ -1.04
ZEB1-217ENST00000559858 SLKQ9H2G2 1235 aaPredicted RBP8.55□□□□□ -1.04
ZEB1-217ENST00000559858 SLC4A1APQ9BWU0 796 aaKnown RBP8.55□□□□□ -1.04
ZEB1-217ENST00000559858 ARHGEF11O15085 1522 aa8.55□□□□□ -1.04
ZEB1-217ENST00000559858 KDM5CP41229 1560 aa8.55□□□□□ -1.04
ZEB1-217ENST00000559858 ARXQ96QS3 562 aa8.54□□□□□ -1.04
ZEB1-217ENST00000559858 MYH16Q9H6N6 1097 aa8.54□□□□□ -1.04
ZEB1-217ENST00000559858 PLEKHH2Q8IVE3 1493 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms