RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 TTBK1Q5TCY1 1321 aaPredicted RBP8.77□□□□□ -1.01
CDK12-204ENST00000559545 PHLDB1Q86UU1 1377 aa8.76□□□□□ -1.01
CDK12-204ENST00000559545 MAP3K1Q13233 1512 aa8.76□□□□□ -1.01
CDK12-204ENST00000559545 CEP162Q5TB80 1403 aa8.75□□□□□ -1.01
CDK12-204ENST00000559545 PLEKHD1A6NEE1 506 aa8.75□□□□□ -1.01
CDK12-204ENST00000559545 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
CDK12-204ENST00000559545 HECW1Q76N89 1606 aa8.75□□□□□ -1.01
CDK12-204ENST00000559545 FYCO1Q9BQS8 1478 aa8.75□□□□□ -1.01
CDK12-204ENST00000559545 ARAP3Q8WWN8 1544 aa8.74□□□□□ -1.01
CDK12-204ENST00000559545 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
CDK12-204ENST00000559545 NBR1Q14596 966 aa8.73□□□□□ -1.01
CDK12-204ENST00000559545 TRHP20396 242 aaPredicted RBP8.72□□□□□ -1.01
CDK12-204ENST00000559545 MYT1Q01538 1121 aa8.72□□□□□ -1.01
CDK12-204ENST00000559545 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
CDK12-204ENST00000559545 CDK11AQ9UQ88 783 aaPredicted RBP8.72□□□□□ -1.01
CDK12-204ENST00000559545 TROQ12816 1431 aaPredicted RBP8.71□□□□□ -1.02
CDK12-204ENST00000559545 TSPOAP1O95153 1857 aa8.7□□□□□ -1.02
CDK12-204ENST00000559545 CD109Q6YHK3 1445 aa8.7□□□□□ -1.02
CDK12-204ENST00000559545 VPS8Q8N3P4 1428 aa8.7□□□□□ -1.02
CDK12-204ENST00000559545 TEX14Q8IWB6 1497 aa8.7□□□□□ -1.02
CDK12-204ENST00000559545 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDK12-204ENST00000559545 BBXQ8WY36 941 aaPredicted RBP8.69□□□□□ -1.02
CDK12-204ENST00000559545 PLCH2O75038 1416 aa8.69□□□□□ -1.02
CDK12-204ENST00000559545 NEO1Q92859 1461 aa8.69□□□□□ -1.02
CDK12-204ENST00000559545 PCF11O94913 1555 aaKnown RBP8.69□□□□□ -1.02
CDK12-204ENST00000559545 PAXIP1Q6ZW49 1069 aaPredicted RBP8.68□□□□□ -1.02
CDK12-204ENST00000559545 CDK13Q14004 1512 aaKnown RBP8.68□□□□□ -1.02
CDK12-204ENST00000559545 COL17A1Q9UMD9 1497 aaPredicted RBP8.67□□□□□ -1.02
CDK12-204ENST00000559545 CDC42BPBQ9Y5S2 1711 aa8.67□□□□□ -1.02
CDK12-204ENST00000559545 APLP2Q06481 763 aa8.66□□□□□ -1.02
CDK12-204ENST00000559545 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
CDK12-204ENST00000559545 NPM2Q86SE8 214 aaKnown RBP8.65□□□□□ -1.02
CDK12-204ENST00000559545 CFAP44Q96MT7 982 aa8.65□□□□□ -1.02
CDK12-204ENST00000559545 CDC42BPAQ5VT25 1732 aa8.64□□□□□ -1.03
CDK12-204ENST00000559545 MYO5CQ9NQX4 1742 aa8.64□□□□□ -1.03
CDK12-204ENST00000559545 TIAM1Q13009 1591 aa8.63□□□□□ -1.03
CDK12-204ENST00000559545 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
CDK12-204ENST00000559545 TTC37Q6PGP7 1564 aa8.62□□□□□ -1.03
CDK12-204ENST00000559545 DMRT2Q9Y5R5 561 aa8.62□□□□□ -1.03
CDK12-204ENST00000559545 GPATCH8Q9UKJ3 1502 aaKnown RBP8.62□□□□□ -1.03
CDK12-204ENST00000559545 RICTORQ6R327 1708 aa8.62□□□□□ -1.03
CDK12-204ENST00000559545 AKNAQ7Z591 1439 aa8.62□□□□□ -1.03
CDK12-204ENST00000559545 KIF14Q15058 1648 aa8.62□□□□□ -1.03
CDK12-204ENST00000559545 EFCAB2Q5VUJ9 269 aa8.61□□□□□ -1.03
CDK12-204ENST00000559545 LRRC9Q6ZRR7 1453 aa8.61□□□□□ -1.03
CDK12-204ENST00000559545 KIAA1107Q9UPP5 1409 aa8.61□□□□□ -1.03
CDK12-204ENST00000559545 KDM6BO15054 1643 aa8.61□□□□□ -1.03
CDK12-204ENST00000559545 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
CDK12-204ENST00000559545 EHBP1L1Q8N3D4 1523 aa8.6□□□□□ -1.03
CDK12-204ENST00000559545 MAGI2Q86UL8 1455 aa8.6□□□□□ -1.03
CDK12-204ENST00000559545 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.6□□□□□ -1.03
CDK12-204ENST00000559545 HNRNPUL2Q1KMD3 747 aaKnown RBP8.6□□□□□ -1.03
CDK12-204ENST00000559545 FANCAO15360 1455 aa8.59□□□□□ -1.03
CDK12-204ENST00000559545 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
CDK12-204ENST00000559545 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
CDK12-204ENST00000559545 RNF216Q9NWF9 866 aaPredicted RBP8.58□□□□□ -1.04
CDK12-204ENST00000559545 ZMYM4Q5VZL5 1548 aa8.58□□□□□ -1.04
CDK12-204ENST00000559545 MIA2Q96PC5 1412 aa8.57□□□□□ -1.04
CDK12-204ENST00000559545 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
CDK12-204ENST00000559545 MTUS2Q5JR59 1369 aa8.57□□□□□ -1.04
CDK12-204ENST00000559545 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
CDK12-204ENST00000559545 KDM5CP41229 1560 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 KANK4Q5T7N3 995 aaPredicted RBP8.56□□□□□ -1.04
CDK12-204ENST00000559545 KLHL34Q8N239 644 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 DENND4BO75064 1496 aaPredicted RBP8.56□□□□□ -1.04
CDK12-204ENST00000559545 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 MBD5Q9P267 1494 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
CDK12-204ENST00000559545 ARHGEF12Q9NZN5 1544 aa8.55□□□□□ -1.04
CDK12-204ENST00000559545 MYCNP04198 464 aaPredicted RBP8.55□□□□□ -1.04
CDK12-204ENST00000559545 MAPK8IP2Q13387 824 aaPredicted RBP8.55□□□□□ -1.04
CDK12-204ENST00000559545 ATP1B4Q9UN42 357 aaPredicted RBP8.55□□□□□ -1.04
CDK12-204ENST00000559545 NCOA2Q15596 1464 aa8.55□□□□□ -1.04
CDK12-204ENST00000559545 SCAPERQ9BY12 1400 aa8.54□□□□□ -1.04
CDK12-204ENST00000559545 REREQ9P2R6 1566 aa8.54□□□□□ -1.04
CDK12-204ENST00000559545 SPRYD3Q8NCJ5 442 aa8.54□□□□□ -1.04
CDK12-204ENST00000559545 ABCC1P33527 1531 aa8.54□□□□□ -1.04
CDK12-204ENST00000559545 RTEL1-TNFRSF6BF6WH68 1400 aa8.54□□□□□ -1.04
CDK12-204ENST00000559545 SAMD9LQ8IVG5 1584 aa8.53□□□□□ -1.04
CDK12-204ENST00000559545 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
CDK12-204ENST00000559545 CCNB3Q8WWL7 1395 aa8.53□□□□□ -1.04
CDK12-204ENST00000559545 TSHZ2Q9NRE2 1034 aa8.53□□□□□ -1.04
CDK12-204ENST00000559545 POGZQ7Z3K3 1410 aa8.53□□□□□ -1.04
CDK12-204ENST00000559545 ZNF518AQ6AHZ1 1483 aa8.52□□□□□ -1.05
CDK12-204ENST00000559545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.52□□□□□ -1.05
CDK12-204ENST00000559545 SETD1BQ9UPS6 1966 aaKnown RBP8.52□□□□□ -1.05
CDK12-204ENST00000559545 CFDP1Q9UEE9 299 aaPredicted RBP8.52□□□□□ -1.05
CDK12-204ENST00000559545 KIDINS220Q9ULH0 1771 aa8.52□□□□□ -1.05
CDK12-204ENST00000559545 ARHGEF5Q12774 1597 aa8.52□□□□□ -1.05
CDK12-204ENST00000559545 ARHGAP5Q13017 1502 aa8.51□□□□□ -1.05
CDK12-204ENST00000559545 RAPGEF3O95398 923 aa8.51□□□□□ -1.05
CDK12-204ENST00000559545 HOXD11P31277 338 aaPredicted RBP8.51□□□□□ -1.05
CDK12-204ENST00000559545 PKD2Q13563 968 aa8.51□□□□□ -1.05
CDK12-204ENST00000559545 MYOM3Q5VTT5 1437 aa8.51□□□□□ -1.05
CDK12-204ENST00000559545 TCOF1Q13428 1488 aaKnown RBP8.51□□□□□ -1.05
CDK12-204ENST00000559545 AGLP35573 1532 aa8.5□□□□□ -1.05
CDK12-204ENST00000559545 TRAPPC8Q9Y2L5 1435 aa8.5□□□□□ -1.05
CDK12-204ENST00000559545 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
CDK12-204ENST00000559545 MAST1Q9Y2H9 1570 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms