RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
CTDSPL2-204ENST00000558966 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-204ENST00000558966 PPRC1Q5VV67 1664 aaKnown RBP9.91□□□□□ -0.82
CTDSPL2-204ENST00000558966 ATP10BO94823 1461 aa9.9□□□□□ -0.82
CTDSPL2-204ENST00000558966 NUP153P49790 1475 aaKnown RBP9.89□□□□□ -0.83
CTDSPL2-204ENST00000558966 MAP3K4Q9Y6R4 1608 aa9.89□□□□□ -0.83
CTDSPL2-204ENST00000558966 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
CTDSPL2-204ENST00000558966 ARID3CA6NKF2 412 aa9.88□□□□□ -0.83
CTDSPL2-204ENST00000558966 CFAP43Q8NDM7 1665 aa9.85□□□□□ -0.83
CTDSPL2-204ENST00000558966 KDM6BO15054 1643 aa9.85□□□□□ -0.83
CTDSPL2-204ENST00000558966 SPDYE2BA6NHP3 402 aa9.85□□□□□ -0.83
CTDSPL2-204ENST00000558966 SPDYE6P0CI01 402 aa9.85□□□□□ -0.83
CTDSPL2-204ENST00000558966 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
CTDSPL2-204ENST00000558966 KCNH8Q96L42 1107 aa9.83□□□□□ -0.84
CTDSPL2-204ENST00000558966 FMN1Q68DA7 1419 aa9.83□□□□□ -0.84
CTDSPL2-204ENST00000558966 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
CTDSPL2-204ENST00000558966 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
CTDSPL2-204ENST00000558966 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
CTDSPL2-204ENST00000558966 CDK13Q14004 1512 aaKnown RBP9.82□□□□□ -0.84
CTDSPL2-204ENST00000558966 ABCA9Q8IUA7 1624 aa9.82□□□□□ -0.84
CTDSPL2-204ENST00000558966 CD109Q6YHK3 1445 aa9.81□□□□□ -0.84
CTDSPL2-204ENST00000558966 MAGI3Q5TCQ9 1506 aa9.81□□□□□ -0.84
CTDSPL2-204ENST00000558966 HECW1Q76N89 1606 aa9.81□□□□□ -0.84
CTDSPL2-204ENST00000558966 COL17A1Q9UMD9 1497 aaPredicted RBP9.81□□□□□ -0.84
CTDSPL2-204ENST00000558966 LRRIQ1Q96JM4 1722 aa9.79□□□□□ -0.84
CTDSPL2-204ENST00000558966 CLIP1P30622 1438 aa9.79□□□□□ -0.84
CTDSPL2-204ENST00000558966 PCF11O94913 1555 aaKnown RBP9.79□□□□□ -0.84
CTDSPL2-204ENST00000558966 PLEKHD1A6NEE1 506 aa9.76□□□□□ -0.85
CTDSPL2-204ENST00000558966 KLHL34Q8N239 644 aa9.76□□□□□ -0.85
CTDSPL2-204ENST00000558966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.76□□□□□ -0.85
CTDSPL2-204ENST00000558966 TTC37Q6PGP7 1564 aa9.76□□□□□ -0.85
CTDSPL2-204ENST00000558966 CASKIN1Q8WXD9 1431 aa9.76□□□□□ -0.85
CTDSPL2-204ENST00000558966 PKD2Q13563 968 aa9.75□□□□□ -0.85
CTDSPL2-204ENST00000558966 ATP1B4Q9UN42 357 aaPredicted RBP9.75□□□□□ -0.85
CTDSPL2-204ENST00000558966 STAG3Q9UJ98 1225 aa9.74□□□□□ -0.85
CTDSPL2-204ENST00000558966 FYCO1Q9BQS8 1478 aa9.74□□□□□ -0.85
CTDSPL2-204ENST00000558966 CEP162Q5TB80 1403 aa9.73□□□□□ -0.85
CTDSPL2-204ENST00000558966 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
CTDSPL2-204ENST00000558966 NEO1Q92859 1461 aa9.73□□□□□ -0.85
CTDSPL2-204ENST00000558966 KIF14Q15058 1648 aa9.73□□□□□ -0.85
CTDSPL2-204ENST00000558966 PLCD3Q8N3E9 789 aa9.72□□□□□ -0.85
CTDSPL2-204ENST00000558966 CCDC18Q5T9S5 1454 aa9.72□□□□□ -0.85
CTDSPL2-204ENST00000558966 TROQ12816 1431 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL2-204ENST00000558966 LOC105371045A0A1W2PR82 267 aa9.71□□□□□ -0.85
CTDSPL2-204ENST00000558966 SPOCK2Q92563 424 aa9.71□□□□□ -0.85
CTDSPL2-204ENST00000558966 PHLDB1Q86UU1 1377 aa9.7□□□□□ -0.86
CTDSPL2-204ENST00000558966 FRMPD1Q5SYB0 1578 aa9.7□□□□□ -0.86
CTDSPL2-204ENST00000558966 FANCAO15360 1455 aa9.7□□□□□ -0.86
CTDSPL2-204ENST00000558966 CDK11AQ9UQ88 783 aaPredicted RBP9.7□□□□□ -0.86
CTDSPL2-204ENST00000558966 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
CTDSPL2-204ENST00000558966 MIER1Q8N108 512 aa9.69□□□□□ -0.86
CTDSPL2-204ENST00000558966 MYO5CQ9NQX4 1742 aa9.69□□□□□ -0.86
CTDSPL2-204ENST00000558966 PLCH2O75038 1416 aa9.68□□□□□ -0.86
CTDSPL2-204ENST00000558966 AKNAQ7Z591 1439 aa9.67□□□□□ -0.86
CTDSPL2-204ENST00000558966 RICTORQ6R327 1708 aa9.67□□□□□ -0.86
CTDSPL2-204ENST00000558966 RAPGEF3O95398 923 aa9.66□□□□□ -0.86
CTDSPL2-204ENST00000558966 KDM4FA0A1W2PPD8 638 aa9.66□□□□□ -0.86
CTDSPL2-204ENST00000558966 DENND4BO75064 1496 aaPredicted RBP9.65□□□□□ -0.86
CTDSPL2-204ENST00000558966 CDC42BPBQ9Y5S2 1711 aa9.65□□□□□ -0.86
CTDSPL2-204ENST00000558966 PREX2Q70Z35 1606 aa9.65□□□□□ -0.87
CTDSPL2-204ENST00000558966 ADGRL1O94910 1474 aa9.64□□□□□ -0.87
CTDSPL2-204ENST00000558966 ARHGAP5Q13017 1502 aa9.64□□□□□ -0.87
CTDSPL2-204ENST00000558966 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
CTDSPL2-204ENST00000558966 ZMYM4Q5VZL5 1548 aa9.63□□□□□ -0.87
CTDSPL2-204ENST00000558966 CDC42BPAQ5VT25 1732 aa9.63□□□□□ -0.87
CTDSPL2-204ENST00000558966 VPS8Q8N3P4 1428 aa9.63□□□□□ -0.87
CTDSPL2-204ENST00000558966 ARHGEF40Q8TER5 1519 aa9.62□□□□□ -0.87
CTDSPL2-204ENST00000558966 POGZQ7Z3K3 1410 aa9.62□□□□□ -0.87
CTDSPL2-204ENST00000558966 SCAPERQ9BY12 1400 aa9.62□□□□□ -0.87
CTDSPL2-204ENST00000558966 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
CTDSPL2-204ENST00000558966 EFCAB2Q5VUJ9 269 aa9.62□□□□□ -0.87
CTDSPL2-204ENST00000558966 EHBP1L1Q8N3D4 1523 aa9.61□□□□□ -0.87
CTDSPL2-204ENST00000558966 MTUS2Q5JR59 1369 aa9.6□□□□□ -0.87
CTDSPL2-204ENST00000558966 ABCC1P33527 1531 aa9.6□□□□□ -0.87
CTDSPL2-204ENST00000558966 GPATCH8Q9UKJ3 1502 aaKnown RBP9.6□□□□□ -0.87
CTDSPL2-204ENST00000558966 TIAM1Q13009 1591 aa9.59□□□□□ -0.87
CTDSPL2-204ENST00000558966 YEATS2Q9ULM3 1422 aa9.59□□□□□ -0.87
CTDSPL2-204ENST00000558966 ZFYVE16Q7Z3T8 1539 aa9.59□□□□□ -0.87
CTDSPL2-204ENST00000558966 ARHGEF12Q9NZN5 1544 aa9.59□□□□□ -0.87
CTDSPL2-204ENST00000558966 KDM5CP41229 1560 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 MAGI2Q86UL8 1455 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 ITSN2Q9NZM3 1697 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 SIGLEC1Q9BZZ2 1709 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 SAMD9LQ8IVG5 1584 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 ZNF518AQ6AHZ1 1483 aa9.58□□□□□ -0.88
CTDSPL2-204ENST00000558966 TRAPPC8Q9Y2L5 1435 aa9.56□□□□□ -0.88
CTDSPL2-204ENST00000558966 CCNB3Q8WWL7 1395 aa9.56□□□□□ -0.88
CTDSPL2-204ENST00000558966 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
CTDSPL2-204ENST00000558966 ADAMTSL3P82987 1691 aa9.56□□□□□ -0.88
CTDSPL2-204ENST00000558966 BCORL1Q5H9F3 1711 aa9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 SYCP2Q9BX26 1530 aa9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 SUPT6HQ7KZ85 1726 aaKnown RBP9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 AFAP1Q8N556 730 aa9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 MAP3K1Q13233 1512 aa9.55□□□□□ -0.88
CTDSPL2-204ENST00000558966 NCOA2Q15596 1464 aa9.54□□□□□ -0.88
CTDSPL2-204ENST00000558966 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
CTDSPL2-204ENST00000558966 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 DIP2CQ9Y2E4 1556 aa9.53□□□□□ -0.88
CTDSPL2-204ENST00000558966 MLH3Q9UHC1 1453 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms