RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 KIAA0556O60303 1618 aa16.89■□□□□ 0.29
SPG11-212ENST00000558790 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
SPG11-212ENST00000558790 SOCS7O14512 581 aa16.89■□□□□ 0.29
SPG11-212ENST00000558790 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
SPG11-212ENST00000558790 UGGT2Q9NYU1 1516 aa16.87■□□□□ 0.29
SPG11-212ENST00000558790 AMER1Q5JTC6 1135 aaPredicted RBP16.85■□□□□ 0.29
SPG11-212ENST00000558790 PLCD3Q8N3E9 789 aa16.85■□□□□ 0.29
SPG11-212ENST00000558790 UACAQ9BZF9 1416 aa16.85■□□□□ 0.29
SPG11-212ENST00000558790 KIF21BO75037 1637 aa16.85■□□□□ 0.29
SPG11-212ENST00000558790 MIER1Q8N108 512 aa16.84■□□□□ 0.29
SPG11-212ENST00000558790 KDM5BQ9UGL1 1544 aa16.84■□□□□ 0.29
SPG11-212ENST00000558790 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
SPG11-212ENST00000558790 RAPGEF2Q9Y4G8 1499 aa16.83■□□□□ 0.28
SPG11-212ENST00000558790 EPRSP07814 1512 aaKnown RBP16.82■□□□□ 0.28
SPG11-212ENST00000558790 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
SPG11-212ENST00000558790 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
SPG11-212ENST00000558790 TEX14Q8IWB6 1497 aa16.75■□□□□ 0.27
SPG11-212ENST00000558790 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
SPG11-212ENST00000558790 CFAP43Q8NDM7 1665 aa16.74■□□□□ 0.27
SPG11-212ENST00000558790 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
SPG11-212ENST00000558790 ABCA8O94911 1581 aa16.72■□□□□ 0.27
SPG11-212ENST00000558790 PTPRMP28827 1452 aa16.71■□□□□ 0.27
SPG11-212ENST00000558790 ADAMTSL3P82987 1691 aa16.71■□□□□ 0.27
SPG11-212ENST00000558790 PCF11O94913 1555 aaKnown RBP16.69■□□□□ 0.26
SPG11-212ENST00000558790 GOLGA3Q08378 1498 aa16.67■□□□□ 0.26
SPG11-212ENST00000558790 SPATA31D1Q6ZQQ2 1576 aa16.65■□□□□ 0.26
SPG11-212ENST00000558790 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
SPG11-212ENST00000558790 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
SPG11-212ENST00000558790 MAGI3Q5TCQ9 1506 aa16.63■□□□□ 0.25
SPG11-212ENST00000558790 CERKQ8TCT0 537 aa16.62■□□□□ 0.25
SPG11-212ENST00000558790 CREBZFQ9NS37 354 aa16.62■□□□□ 0.25
SPG11-212ENST00000558790 MADDQ8WXG6 1647 aa16.62■□□□□ 0.25
SPG11-212ENST00000558790 SPOCK2Q92563 424 aa16.61■□□□□ 0.25
SPG11-212ENST00000558790 HSPA2P54652 639 aa16.59■□□□□ 0.25
SPG11-212ENST00000558790 CD109Q6YHK3 1445 aa16.59■□□□□ 0.25
SPG11-212ENST00000558790 BCORL1Q5H9F3 1711 aa16.58■□□□□ 0.24
SPG11-212ENST00000558790 SAMD9Q5K651 1589 aa16.57■□□□□ 0.24
SPG11-212ENST00000558790 ABCA9Q8IUA7 1624 aa16.56■□□□□ 0.24
SPG11-212ENST00000558790 RIMS1Q86UR5 1692 aaKnown RBP16.55■□□□□ 0.24
SPG11-212ENST00000558790 ZBTB47Q9UFB7 747 aaPredicted RBP16.53■□□□□ 0.24
SPG11-212ENST00000558790 RAPGEF6Q8TEU7 1601 aa16.52■□□□□ 0.24
SPG11-212ENST00000558790 CHADLQ6NUI6 762 aa16.52■□□□□ 0.24
SPG11-212ENST00000558790 KCNH8Q96L42 1107 aa16.52■□□□□ 0.24
SPG11-212ENST00000558790 ARAP3Q8WWN8 1544 aa16.5■□□□□ 0.23
SPG11-212ENST00000558790 ATP10BO94823 1461 aa16.5■□□□□ 0.23
SPG11-212ENST00000558790 CHRDL2Q6WN34 429 aa16.5■□□□□ 0.23
SPG11-212ENST00000558790 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
SPG11-212ENST00000558790 ARID3CA6NKF2 412 aa16.47■□□□□ 0.23
SPG11-212ENST00000558790 MNX1P50219 401 aaPredicted RBP16.47■□□□□ 0.23
SPG11-212ENST00000558790 PKD2Q13563 968 aa16.44■□□□□ 0.22
SPG11-212ENST00000558790 P3H3Q8IVL6 736 aa16.43■□□□□ 0.22
SPG11-212ENST00000558790 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
SPG11-212ENST00000558790 NUP153P49790 1475 aaKnown RBP16.42■□□□□ 0.22
SPG11-212ENST00000558790 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
SPG11-212ENST00000558790 FXR2P51116 673 aaKnown RBP eCLIP16.41■□□□□ 0.226e-8■■■□□ 16.7
SPG11-212ENST00000558790 SIGLEC1Q9BZZ2 1709 aa16.41■□□□□ 0.22
SPG11-212ENST00000558790 NEO1Q92859 1461 aa16.4■□□□□ 0.22
SPG11-212ENST00000558790 RAPGEF3O95398 923 aa16.39■□□□□ 0.21
SPG11-212ENST00000558790 ARHGEF40Q8TER5 1519 aa16.39■□□□□ 0.21
SPG11-212ENST00000558790 STRCQ7RTU9 1775 aa16.38■□□□□ 0.21
SPG11-212ENST00000558790 FHOD3Q2V2M9 1422 aa16.37■□□□□ 0.21
SPG11-212ENST00000558790 NUBP1P53384 320 aa16.37■□□□□ 0.21
SPG11-212ENST00000558790 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
SPG11-212ENST00000558790 CFAP74Q9C0B2 1584 aa16.37■□□□□ 0.21
SPG11-212ENST00000558790 ARID4BQ4LE39 1312 aaPredicted RBP16.37■□□□□ 0.21
SPG11-212ENST00000558790 PHLDB1Q86UU1 1377 aa16.37■□□□□ 0.21
SPG11-212ENST00000558790 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
SPG11-212ENST00000558790 TTC37Q6PGP7 1564 aa16.35■□□□□ 0.21
SPG11-212ENST00000558790 FAM9AQ8IZU1 332 aaPredicted RBP16.34■□□□□ 0.21
SPG11-212ENST00000558790 EFCAB5A4FU69 1503 aa16.33■□□□□ 0.2
SPG11-212ENST00000558790 EEA1Q15075 1411 aa16.32■□□□□ 0.2
SPG11-212ENST00000558790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPG11-212ENST00000558790 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
SPG11-212ENST00000558790 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
SPG11-212ENST00000558790 FER1L4A9Z1Z3 1794 aa16.29■□□□□ 0.2
SPG11-212ENST00000558790 ECM2O94769 699 aaPredicted RBP16.28■□□□□ 0.2
SPG11-212ENST00000558790 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
SPG11-212ENST00000558790 FANCAO15360 1455 aa16.28■□□□□ 0.2
SPG11-212ENST00000558790 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
SPG11-212ENST00000558790 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
SPG11-212ENST00000558790 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
SPG11-212ENST00000558790 DCAF8Q5TAQ9 597 aa16.26■□□□□ 0.19
SPG11-212ENST00000558790 DENND4BO75064 1496 aaPredicted RBP16.26■□□□□ 0.19
SPG11-212ENST00000558790 MYO5CQ9NQX4 1742 aa16.25■□□□□ 0.19
SPG11-212ENST00000558790 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
SPG11-212ENST00000558790 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
SPG11-212ENST00000558790 LTBP4Q8N2S1 1624 aa16.23■□□□□ 0.19
SPG11-212ENST00000558790 HECW1Q76N89 1606 aa16.22■□□□□ 0.19
SPG11-212ENST00000558790 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
SPG11-212ENST00000558790 YEATS2Q9ULM3 1422 aa16.21■□□□□ 0.19
SPG11-212ENST00000558790 FAM212AQ96EL1 285 aa16.21■□□□□ 0.19
SPG11-212ENST00000558790 GSE1Q14687 1217 aa16.2■□□□□ 0.18
SPG11-212ENST00000558790 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
SPG11-212ENST00000558790 KIF14Q15058 1648 aa16.19■□□□□ 0.18
SPG11-212ENST00000558790 MLECQ14165 292 aa16.18■□□□□ 0.18
SPG11-212ENST00000558790 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
SPG11-212ENST00000558790 MAGI2Q86UL8 1455 aa16.16■□□□□ 0.18
SPG11-212ENST00000558790 RGL2O15211 777 aa16.15■□□□□ 0.18
SPG11-212ENST00000558790 CEBPAP49715 358 aaPredicted RBP16.15■□□□□ 0.18
SPG11-212ENST00000558790 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms