RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 BIVM-ERCC5R4GMW8 1640 aa9.89□□□□□ -0.83
LRRC28-208ENST00000558771 JPH4Q96JJ6 628 aa9.88□□□□□ -0.83
LRRC28-208ENST00000558771 CIZ1Q9ULV3 898 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-208ENST00000558771 TOP2BQ02880 1626 aa9.87□□□□□ -0.83
LRRC28-208ENST00000558771 MAP3K13O43283 966 aa9.87□□□□□ -0.83
LRRC28-208ENST00000558771 KDM4FA0A1W2PPD8 638 aa9.86□□□□□ -0.83
LRRC28-208ENST00000558771 PYGBP11216 843 aa9.86□□□□□ -0.83
LRRC28-208ENST00000558771 MS4A3Q96HJ5 214 aa9.86□□□□□ -0.83
LRRC28-208ENST00000558771 DIP2BQ9P265 1576 aa9.86□□□□□ -0.83
LRRC28-208ENST00000558771 MAPKBP1O60336 1514 aa9.86□□□□□ -0.83
LRRC28-208ENST00000558771 RUSC2Q8N2Y8 1516 aa9.84□□□□□ -0.83
LRRC28-208ENST00000558771 KDM6BO15054 1643 aa9.83□□□□□ -0.84
LRRC28-208ENST00000558771 ADCY10Q96PN6 1610 aa9.83□□□□□ -0.84
LRRC28-208ENST00000558771 SGIP1Q9BQI5 828 aa9.83□□□□□ -0.84
LRRC28-208ENST00000558771 CHRM1P11229 460 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-208ENST00000558771 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
LRRC28-208ENST00000558771 TSPOAP1O95153 1857 aa9.81□□□□□ -0.84
LRRC28-208ENST00000558771 ILDR1Q86SU0 546 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-208ENST00000558771 DCBLD2Q96PD2 775 aa9.81□□□□□ -0.84
LRRC28-208ENST00000558771 SUPT5HO00267 1087 aaKnown RBP9.8□□□□□ -0.84
LRRC28-208ENST00000558771 POTEIP0CG38 1075 aa9.79□□□□□ -0.84
LRRC28-208ENST00000558771 LHX8Q68G74 356 aa9.79□□□□□ -0.84
LRRC28-208ENST00000558771 IFNL1Q8IU54 200 aa9.78□□□□□ -0.84
LRRC28-208ENST00000558771 TRPC6Q9Y210 931 aa9.76□□□□□ -0.85
LRRC28-208ENST00000558771 KIAA0586Q9BVV6 1533 aa9.76□□□□□ -0.85
LRRC28-208ENST00000558771 PCDHB8Q9UN66 801 aa9.75□□□□□ -0.85
LRRC28-208ENST00000558771 PPRC1Q5VV67 1664 aaKnown RBP9.72□□□□□ -0.85
LRRC28-208ENST00000558771 PTPRGP23470 1445 aa9.72□□□□□ -0.85
LRRC28-208ENST00000558771 ADGRL1O94910 1474 aa9.72□□□□□ -0.85
LRRC28-208ENST00000558771 ATMINO43313 823 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-208ENST00000558771 TIE1P35590 1138 aa9.71□□□□□ -0.86
LRRC28-208ENST00000558771 ASTLQ6HA08 431 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-208ENST00000558771 ZNF467Q7Z7K2 595 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-208ENST00000558771 TTBK1Q5TCY1 1321 aaPredicted RBP9.71□□□□□ -0.86
LRRC28-208ENST00000558771 IGF1RP08069 1367 aa9.71□□□□□ -0.86
LRRC28-208ENST00000558771 PKD2Q13563 968 aa9.7□□□□□ -0.86
LRRC28-208ENST00000558771 BMP2KQ9NSY1 1161 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-208ENST00000558771 ABCC2Q92887 1545 aa9.7□□□□□ -0.86
LRRC28-208ENST00000558771 GLI2P10070 1586 aa9.69□□□□□ -0.86
LRRC28-208ENST00000558771 CUL7Q14999 1698 aa9.69□□□□□ -0.86
LRRC28-208ENST00000558771 ASXL2Q76L83 1435 aa9.69□□□□□ -0.86
LRRC28-208ENST00000558771 PLB1Q6P1J6 1458 aa9.68□□□□□ -0.86
LRRC28-208ENST00000558771 TNIKQ9UKE5 1360 aa9.68□□□□□ -0.86
LRRC28-208ENST00000558771 ATN1P54259 1190 aaPredicted RBP9.68□□□□□ -0.86
LRRC28-208ENST00000558771 PELP1Q8IZL8 1130 aaKnown RBP9.68□□□□□ -0.86
LRRC28-208ENST00000558771 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-208ENST00000558771 KIF27Q86VH2 1401 aa9.67□□□□□ -0.86
LRRC28-208ENST00000558771 TTLL13PA6NNM8 815 aa9.67□□□□□ -0.86
LRRC28-208ENST00000558771 HECW2Q9P2P5 1572 aa9.67□□□□□ -0.86
LRRC28-208ENST00000558771 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
LRRC28-208ENST00000558771 ECM2O94769 699 aaPredicted RBP9.66□□□□□ -0.86
LRRC28-208ENST00000558771 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
LRRC28-208ENST00000558771 UHRF1BP1LA0JNW5 1464 aa9.65□□□□□ -0.87
LRRC28-208ENST00000558771 CARMIL1Q5VZK9 1371 aa9.64□□□□□ -0.87
LRRC28-208ENST00000558771 EPRSP07814 1512 aaKnown RBP9.64□□□□□ -0.87
LRRC28-208ENST00000558771 UACAQ9BZF9 1416 aa9.64□□□□□ -0.87
LRRC28-208ENST00000558771 MAP3K4Q9Y6R4 1608 aa9.64□□□□□ -0.87
LRRC28-208ENST00000558771 PSEN1P49768 467 aa9.63□□□□□ -0.87
LRRC28-208ENST00000558771 IQGAP2Q13576 1575 aa9.63□□□□□ -0.87
LRRC28-208ENST00000558771 PDAP1Q13442 181 aaKnown RBP9.62□□□□□ -0.87
LRRC28-208ENST00000558771 RNF25Q96BH1 459 aaPredicted RBP9.62□□□□□ -0.87
LRRC28-208ENST00000558771 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
LRRC28-208ENST00000558771 KDM5BQ9UGL1 1544 aa9.61□□□□□ -0.87
LRRC28-208ENST00000558771 TEX14Q8IWB6 1497 aa9.61□□□□□ -0.87
LRRC28-208ENST00000558771 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
LRRC28-208ENST00000558771 TRIM35Q9UPQ4 493 aa9.61□□□□□ -0.87
LRRC28-208ENST00000558771 SLC39A7Q92504 469 aa9.6□□□□□ -0.87
LRRC28-208ENST00000558771 ZCCHC11Q5TAX3 1644 aaKnown RBP9.6□□□□□ -0.87
LRRC28-208ENST00000558771 C7P10643 843 aa9.59□□□□□ -0.87
LRRC28-208ENST00000558771 PLSCR2Q9NRY7 297 aa9.58□□□□□ -0.88
LRRC28-208ENST00000558771 RGL2O15211 777 aa9.57□□□□□ -0.88
LRRC28-208ENST00000558771 VGFO15240 615 aaPredicted RBP9.56□□□□□ -0.88
LRRC28-208ENST00000558771 METRNQ9UJH8 293 aa9.56□□□□□ -0.88
LRRC28-208ENST00000558771 UGGT2Q9NYU1 1516 aa9.56□□□□□ -0.88
LRRC28-208ENST00000558771 WDR7Q9Y4E6 1490 aa9.55□□□□□ -0.88
LRRC28-208ENST00000558771 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
LRRC28-208ENST00000558771 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
LRRC28-208ENST00000558771 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-208ENST00000558771 IER5LQ5T953 404 aa9.53□□□□□ -0.88
LRRC28-208ENST00000558771 FBXO41Q8TF61 875 aa9.53□□□□□ -0.88
LRRC28-208ENST00000558771 ZFP91Q96JP5 570 aaPredicted RBP9.53□□□□□ -0.88
LRRC28-208ENST00000558771 CD109Q6YHK3 1445 aa9.53□□□□□ -0.88
LRRC28-208ENST00000558771 MAGI3Q5TCQ9 1506 aa9.52□□□□□ -0.88
LRRC28-208ENST00000558771 CFAP43Q8NDM7 1665 aa9.52□□□□□ -0.89
LRRC28-208ENST00000558771 RAPGEF2Q9Y4G8 1499 aa9.52□□□□□ -0.89
LRRC28-208ENST00000558771 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
LRRC28-208ENST00000558771 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
LRRC28-208ENST00000558771 KCNH8Q96L42 1107 aa9.51□□□□□ -0.89
LRRC28-208ENST00000558771 KIF21BO75037 1637 aa9.51□□□□□ -0.89
LRRC28-208ENST00000558771 SEC24BO95487 1268 aa9.5□□□□□ -0.89
LRRC28-208ENST00000558771 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
LRRC28-208ENST00000558771 MKRN3Q13064 507 aaKnown RBP9.49□□□□□ -0.89
LRRC28-208ENST00000558771 COLQQ9Y215 455 aaPredicted RBP9.49□□□□□ -0.89
LRRC28-208ENST00000558771 POTEB2H3BUK9 544 aa9.48□□□□□ -0.89
LRRC28-208ENST00000558771 ABCA8O94911 1581 aa9.48□□□□□ -0.89
LRRC28-208ENST00000558771 IRX5P78411 483 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-208ENST00000558771 AMER1Q5JTC6 1135 aaPredicted RBP9.47□□□□□ -0.89
LRRC28-208ENST00000558771 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
LRRC28-208ENST00000558771 PTPRMP28827 1452 aa9.46□□□□□ -0.9
LRRC28-208ENST00000558771 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms