RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 FHOD3Q2V2M9 1422 aa19.25■□□□□ 0.67
HMGB1P8-201ENST00000558211 PLEKHG5O94827 1062 aa19.25■□□□□ 0.67
HMGB1P8-201ENST00000558211 EFCAB5A4FU69 1503 aa19.25■□□□□ 0.67
HMGB1P8-201ENST00000558211 CLIP1P30622 1438 aa19.25■□□□□ 0.67
HMGB1P8-201ENST00000558211 ARHGAP35Q9NRY4 1499 aa19.24■□□□□ 0.67
HMGB1P8-201ENST00000558211 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
HMGB1P8-201ENST00000558211 ZBTB47Q9UFB7 747 aaPredicted RBP19.17■□□□□ 0.66
HMGB1P8-201ENST00000558211 FARP1Q9Y4F1 1045 aaPredicted RBP19.15■□□□□ 0.66
HMGB1P8-201ENST00000558211 PLB1Q6P1J6 1458 aa19.14■□□□□ 0.65
HMGB1P8-201ENST00000558211 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
HMGB1P8-201ENST00000558211 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
HMGB1P8-201ENST00000558211 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
HMGB1P8-201ENST00000558211 ARID3CA6NKF2 412 aa19.11■□□□□ 0.65
HMGB1P8-201ENST00000558211 AMER1Q5JTC6 1135 aaPredicted RBP19.11■□□□□ 0.65
HMGB1P8-201ENST00000558211 ADCY10Q96PN6 1610 aa19.1■□□□□ 0.65
HMGB1P8-201ENST00000558211 FMN1Q68DA7 1419 aa19.09■□□□□ 0.65
HMGB1P8-201ENST00000558211 NPM1P06748 294 aaKnown RBP eCLIP19.09■□□□□ 0.65
HMGB1P8-201ENST00000558211 ABCA8O94911 1581 aa19.08■□□□□ 0.65
HMGB1P8-201ENST00000558211 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
HMGB1P8-201ENST00000558211 ABCC2Q92887 1545 aa19.07■□□□□ 0.64
HMGB1P8-201ENST00000558211 RTN4Q9NQC3 1192 aaKnown RBP19.06■□□□□ 0.64
HMGB1P8-201ENST00000558211 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
HMGB1P8-201ENST00000558211 SPOCK2Q92563 424 aa19.04■□□□□ 0.64
HMGB1P8-201ENST00000558211 NUBP1P53384 320 aa19.01■□□□□ 0.63
HMGB1P8-201ENST00000558211 PCF11O94913 1555 aaKnown RBP19■□□□□ 0.63
HMGB1P8-201ENST00000558211 NUP153P49790 1475 aaKnown RBP18.98■□□□□ 0.63
HMGB1P8-201ENST00000558211 ZCCHC11Q5TAX3 1644 aaKnown RBP18.98■□□□□ 0.63
HMGB1P8-201ENST00000558211 HECW1Q76N89 1606 aa18.97■□□□□ 0.63
HMGB1P8-201ENST00000558211 POTEHQ6S545 545 aa18.97■□□□□ 0.63
HMGB1P8-201ENST00000558211 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
HMGB1P8-201ENST00000558211 ATP10BO94823 1461 aa18.97■□□□□ 0.63
HMGB1P8-201ENST00000558211 KDM5BQ9UGL1 1544 aa18.96■□□□□ 0.63
HMGB1P8-201ENST00000558211 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
HMGB1P8-201ENST00000558211 CDK13Q14004 1512 aaKnown RBP18.94■□□□□ 0.62
HMGB1P8-201ENST00000558211 FYCO1Q9BQS8 1478 aa18.93■□□□□ 0.62
HMGB1P8-201ENST00000558211 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
HMGB1P8-201ENST00000558211 EPRSP07814 1512 aaKnown RBP18.92■□□□□ 0.62
HMGB1P8-201ENST00000558211 ASXL2Q76L83 1435 aa18.9■□□□□ 0.62
HMGB1P8-201ENST00000558211 RASEFQ8IZ41 740 aa18.89■□□□□ 0.61
HMGB1P8-201ENST00000558211 KCNH8Q96L42 1107 aa18.89■□□□□ 0.61
HMGB1P8-201ENST00000558211 PLEKHD1A6NEE1 506 aa18.88■□□□□ 0.61
HMGB1P8-201ENST00000558211 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
HMGB1P8-201ENST00000558211 CCDC18Q5T9S5 1454 aa18.85■□□□□ 0.61
HMGB1P8-201ENST00000558211 CDK11AQ9UQ88 783 aaPredicted RBP18.85■□□□□ 0.61
HMGB1P8-201ENST00000558211 WDR7Q9Y4E6 1490 aa18.83■□□□□ 0.6
HMGB1P8-201ENST00000558211 C19orf67A6NJJ6 358 aa18.82■□□□□ 0.6
HMGB1P8-201ENST00000558211 FAM69CQ0P6D2 419 aa18.81■□□□□ 0.6
HMGB1P8-201ENST00000558211 ABCC10Q5T3U5 1492 aa18.77■□□□□ 0.6
HMGB1P8-201ENST00000558211 FAM212AQ96EL1 285 aa18.77■□□□□ 0.6
HMGB1P8-201ENST00000558211 MTUS2Q5JR59 1369 aa18.77■□□□□ 0.6
HMGB1P8-201ENST00000558211 TIAM1Q13009 1591 aa18.76■□□□□ 0.59
HMGB1P8-201ENST00000558211 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
HMGB1P8-201ENST00000558211 DIP2BQ9P265 1576 aa18.76■□□□□ 0.59
HMGB1P8-201ENST00000558211 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
HMGB1P8-201ENST00000558211 KIF13AQ9H1H9 1805 aa18.75■□□□□ 0.59
HMGB1P8-201ENST00000558211 TROQ12816 1431 aaPredicted RBP18.74■□□□□ 0.59
HMGB1P8-201ENST00000558211 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
HMGB1P8-201ENST00000558211 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
HMGB1P8-201ENST00000558211 GSE1Q14687 1217 aa18.73■□□□□ 0.59
HMGB1P8-201ENST00000558211 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
HMGB1P8-201ENST00000558211 PKD2Q13563 968 aa18.71■□□□□ 0.59
HMGB1P8-201ENST00000558211 DCAF8Q5TAQ9 597 aa18.71■□□□□ 0.59
HMGB1P8-201ENST00000558211 TSPYL2Q9H2G4 693 aaPredicted RBP18.71■□□□□ 0.59
HMGB1P8-201ENST00000558211 TSPOAP1O95153 1857 aa18.71■□□□□ 0.59
HMGB1P8-201ENST00000558211 MAP3K1Q13233 1512 aa18.7■□□□□ 0.58
HMGB1P8-201ENST00000558211 KIF14Q15058 1648 aa18.7■□□□□ 0.58
HMGB1P8-201ENST00000558211 HAX1O00165 279 aa18.69■□□□□ 0.58
HMGB1P8-201ENST00000558211 CIZ1Q9ULV3 898 aaPredicted RBP18.69■□□□□ 0.58
HMGB1P8-201ENST00000558211 LRRC9Q6ZRR7 1453 aa18.69■□□□□ 0.58
HMGB1P8-201ENST00000558211 GLI2P10070 1586 aa18.68■□□□□ 0.58
HMGB1P8-201ENST00000558211 EHBP1L1Q8N3D4 1523 aa18.68■□□□□ 0.58
HMGB1P8-201ENST00000558211 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.58
HMGB1P8-201ENST00000558211 CCDC61Q9Y6R9 512 aa18.66■□□□□ 0.58
HMGB1P8-201ENST00000558211 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
HMGB1P8-201ENST00000558211 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
HMGB1P8-201ENST00000558211 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
HMGB1P8-201ENST00000558211 TTC37Q6PGP7 1564 aa18.64■□□□□ 0.58
HMGB1P8-201ENST00000558211 EVX2Q03828 476 aa18.64■□□□□ 0.57
HMGB1P8-201ENST00000558211 MAP3K4Q9Y6R4 1608 aa18.63■□□□□ 0.57
HMGB1P8-201ENST00000558211 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
HMGB1P8-201ENST00000558211 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
HMGB1P8-201ENST00000558211 NCOA2Q15596 1464 aa18.59■□□□□ 0.57
HMGB1P8-201ENST00000558211 CCNB3Q8WWL7 1395 aa18.59■□□□□ 0.57
HMGB1P8-201ENST00000558211 MYO5CQ9NQX4 1742 aa18.59■□□□□ 0.57
HMGB1P8-201ENST00000558211 PPRC1Q5VV67 1664 aaKnown RBP18.57■□□□□ 0.56
HMGB1P8-201ENST00000558211 ZNF579Q8NAF0 562 aaKnown RBP18.56■□□□□ 0.56
HMGB1P8-201ENST00000558211 PLCH2O75038 1416 aa18.56■□□□□ 0.56
HMGB1P8-201ENST00000558211 CDC42BPAQ5VT25 1732 aa18.55■□□□□ 0.56
HMGB1P8-201ENST00000558211 CHRM1P11229 460 aaPredicted RBP18.55■□□□□ 0.56
HMGB1P8-201ENST00000558211 ZNF777Q9ULD5 760 aaPredicted RBP18.55■□□□□ 0.56
HMGB1P8-201ENST00000558211 CDC42BPBQ9Y5S2 1711 aa18.54■□□□□ 0.56
HMGB1P8-201ENST00000558211 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
HMGB1P8-201ENST00000558211 GPATCH8Q9UKJ3 1502 aaKnown RBP18.54■□□□□ 0.56
HMGB1P8-201ENST00000558211 TEX14Q8IWB6 1497 aa18.53■□□□□ 0.56
HMGB1P8-201ENST00000558211 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
HMGB1P8-201ENST00000558211 CFDP1Q9UEE9 299 aaPredicted RBP18.53■□□□□ 0.56
HMGB1P8-201ENST00000558211 PREX2Q70Z35 1606 aa18.52■□□□□ 0.55
HMGB1P8-201ENST00000558211 FANCAO15360 1455 aa18.51■□□□□ 0.55
HMGB1P8-201ENST00000558211 ECM2O94769 699 aaPredicted RBP18.5■□□□□ 0.55
HMGB1P8-201ENST00000558211 PYGBP11216 843 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms