RNA–Protein interactions for RNA: ENST00000558176.1

HMG20A-203, Transcript of high mobility group 20A, humanhuman

TSL 3

Gene HMG20A, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-203ENST00000558176 BOLA1Q9Y3E2 137 aa6.33□□□□□ -1.4
HMG20A-203ENST00000558176 NESP48681 1621 aa6.32□□□□□ -1.4
HMG20A-203ENST00000558176 HOXB3P14651 431 aaPredicted RBP6.32□□□□□ -1.4
HMG20A-203ENST00000558176 SPOCK2Q92563 424 aa6.32□□□□□ -1.4
HMG20A-203ENST00000558176 HMGXB3Q12766 1538 aa6.31□□□□□ -1.4
HMG20A-203ENST00000558176 SMARCA2P51531 1590 aa6.31□□□□□ -1.4
HMG20A-203ENST00000558176 SMARCA4P51532 1647 aa6.3□□□□□ -1.4
HMG20A-203ENST00000558176 CIZ1Q9ULV3 898 aaPredicted RBP6.3□□□□□ -1.4
HMG20A-203ENST00000558176 HOXB1P14653 301 aaPredicted RBP6.29□□□□□ -1.4
HMG20A-203ENST00000558176 IFNLR1Q8IU57 520 aaPredicted RBP6.29□□□□□ -1.4
HMG20A-203ENST00000558176 BAZ1BQ9UIG0 1483 aaKnown RBP6.28□□□□□ -1.4
HMG20A-203ENST00000558176 DOK7Q18PE1 504 aa6.28□□□□□ -1.4
HMG20A-203ENST00000558176 ZNF710Q8N1W2 664 aa6.28□□□□□ -1.4
HMG20A-203ENST00000558176 BAZ1AQ9NRL2 1556 aaPredicted RBP6.27□□□□□ -1.41
HMG20A-203ENST00000558176 THOC2Q8NI27 1593 aaKnown RBP6.26□□□□□ -1.41
HMG20A-203ENST00000558176 ERBB3P21860 1342 aa6.25□□□□□ -1.41
HMG20A-203ENST00000558176 RIMBP2O15034 1052 aa6.25□□□□□ -1.41
HMG20A-203ENST00000558176 EFCAB3Q8N7B9 438 aa6.24□□□□□ -1.41
HMG20A-203ENST00000558176 TRIM41Q8WV44 630 aa6.24□□□□□ -1.41
HMG20A-203ENST00000558176 PLA2G2EQ9NZK7 142 aa6.23□□□□□ -1.41
HMG20A-203ENST00000558176 MROH2BQ7Z745 1585 aa6.23□□□□□ -1.41
HMG20A-203ENST00000558176 PEG3Q9GZU2 1588 aa6.23□□□□□ -1.41
HMG20A-203ENST00000558176 LAMC3Q9Y6N6 1575 aa6.23□□□□□ -1.41
HMG20A-203ENST00000558176 VARS2Q5ST30 1063 aaKnown RBP6.21□□□□□ -1.42
HMG20A-203ENST00000558176 MICALL2Q8IY33 904 aa6.21□□□□□ -1.42
HMG20A-203ENST00000558176 ZSWIM6Q9HCJ5 1215 aa6.21□□□□□ -1.42
HMG20A-203ENST00000558176 PDS5BQ9NTI5 1447 aa6.2□□□□□ -1.42
HMG20A-203ENST00000558176 PTGER2P43116 358 aa6.19□□□□□ -1.42
HMG20A-203ENST00000558176 TMEM92Q6UXU6 159 aa6.19□□□□□ -1.42
HMG20A-203ENST00000558176 KIF21AQ7Z4S6 1674 aa6.19□□□□□ -1.42
HMG20A-203ENST00000558176 SOX12O15370 315 aa6.18□□□□□ -1.42
HMG20A-203ENST00000558176 ZNF687Q8N1G0 1237 aa6.18□□□□□ -1.42
HMG20A-203ENST00000558176 MRC2Q9UBG0 1479 aa6.17□□□□□ -1.42
HMG20A-203ENST00000558176 GPR153Q6NV75 609 aa6.17□□□□□ -1.42
HMG20A-203ENST00000558176 CADPSQ9ULU8 1353 aa6.17□□□□□ -1.42
HMG20A-203ENST00000558176 MS4A4AQ96JQ5 239 aa6.16□□□□□ -1.42
HMG20A-203ENST00000558176 RIOK3O14730 519 aaKnown RBP6.15□□□□□ -1.42
HMG20A-203ENST00000558176 WDR62O43379 1518 aa6.15□□□□□ -1.43
HMG20A-203ENST00000558176 WIZO95785 1651 aa6.14□□□□□ -1.43
HMG20A-203ENST00000558176 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.13□□□□□ -1.43
HMG20A-203ENST00000558176 VGFO15240 615 aaPredicted RBP6.13□□□□□ -1.43
HMG20A-203ENST00000558176 RNF25Q96BH1 459 aaPredicted RBP6.13□□□□□ -1.43
HMG20A-203ENST00000558176 ZFP91Q96JP5 570 aaPredicted RBP6.13□□□□□ -1.43
HMG20A-203ENST00000558176 PHF8Q9UPP1 1060 aa6.13□□□□□ -1.43
HMG20A-203ENST00000558176 CEP164Q9UPV0 1460 aa6.13□□□□□ -1.43
HMG20A-203ENST00000558176 FANCD2Q9BXW9 1451 aa6.12□□□□□ -1.43
HMG20A-203ENST00000558176 ARSIQ5FYB1 569 aa6.11□□□□□ -1.43
HMG20A-203ENST00000558176 ANKRD13DQ6ZTN6 518 aa6.1□□□□□ -1.43
HMG20A-203ENST00000558176 ZNF316A6NFI3 1004 aaPredicted RBP6.09□□□□□ -1.43
HMG20A-203ENST00000558176 NLRP6P59044 892 aa6.09□□□□□ -1.43
HMG20A-203ENST00000558176 IRX2Q9BZI1 471 aaPredicted RBP6.08□□□□□ -1.44
HMG20A-203ENST00000558176 CFTRP13569 1480 aa6.08□□□□□ -1.44
HMG20A-203ENST00000558176 LSM11P83369 360 aaKnown RBP eCLIP6.07□□□□□ -1.44
HMG20A-203ENST00000558176 FBXO22Q8NEZ5 403 aa6.07□□□□□ -1.44
HMG20A-203ENST00000558176 KHSRPQ92945 711 aaKnown RBP eCLIP6.07□□□□□ -1.441e-6■■■■□ 21.2
HMG20A-203ENST00000558176 URB2Q14146 1524 aaKnown RBP6.07□□□□□ -1.44
HMG20A-203ENST00000558176 TOP2AP11388 1531 aaKnown RBP6.06□□□□□ -1.44
HMG20A-203ENST00000558176 RSF1Q96T23 1441 aaPredicted RBP6.06□□□□□ -1.44
HMG20A-203ENST00000558176 TAOK2Q9UL54 1235 aa6.05□□□□□ -1.44
HMG20A-203ENST00000558176 KIF3CO14782 793 aa6.04□□□□□ -1.44
HMG20A-203ENST00000558176 PBX2P40425 430 aa6.04□□□□□ -1.44
HMG20A-203ENST00000558176 BCL11BQ9C0K0 894 aaPredicted RBP6.04□□□□□ -1.44
HMG20A-203ENST00000558176 HCSTQ9UBK5 93 aa6.04□□□□□ -1.44
HMG20A-203ENST00000558176 C2orf72A6NCS6 295 aa6.03□□□□□ -1.44
HMG20A-203ENST00000558176 MFRPQ9BY79 579 aa6.03□□□□□ -1.44
HMG20A-203ENST00000558176 NUDT7P0C024 238 aa6.02□□□□□ -1.45
HMG20A-203ENST00000558176 STK24Q9Y6E0 443 aa6.02□□□□□ -1.45
HMG20A-203ENST00000558176 ZNF608Q9ULD9 1512 aaPredicted RBP6.02□□□□□ -1.45
HMG20A-203ENST00000558176 SLC34A2O95436 690 aa6.01□□□□□ -1.45
HMG20A-203ENST00000558176 RIMBP3CA6NJZ7 1639 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 RIMBP3BA6NNM3 1639 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 RIMBP3Q9UFD9 1639 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 POTEEQ6S8J3 1075 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 LHX6Q9UPM6 363 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 IFT140Q96RY7 1462 aa6□□□□□ -1.45
HMG20A-203ENST00000558176 ARHGEF11O15085 1522 aa5.99□□□□□ -1.45
HMG20A-203ENST00000558176 PCDHGA4Q9Y5G9 962 aa5.99□□□□□ -1.45
HMG20A-203ENST00000558176 TOPBP1Q92547 1522 aa5.99□□□□□ -1.45
HMG20A-203ENST00000558176 CCDC88BA6NC98 1476 aa5.98□□□□□ -1.45
HMG20A-203ENST00000558176 STK25O00506 426 aa5.98□□□□□ -1.45
HMG20A-203ENST00000558176 AXIN2Q9Y2T1 843 aa5.98□□□□□ -1.45
HMG20A-203ENST00000558176 EIF4G3O43432 1585 aaKnown RBP5.97□□□□□ -1.45
HMG20A-203ENST00000558176 TMC2Q8TDI7 906 aa5.97□□□□□ -1.45
HMG20A-203ENST00000558176 PSDA5PKW4 1024 aaPredicted RBP5.95□□□□□ -1.46
HMG20A-203ENST00000558176 DNMBPQ6XZF7 1577 aa5.95□□□□□ -1.46
HMG20A-203ENST00000558176 PRDM2Q13029 1718 aa5.94□□□□□ -1.46
HMG20A-203ENST00000558176 ARHGAP33O14559 1287 aa5.94□□□□□ -1.46
HMG20A-203ENST00000558176 RGS20O76081 388 aa5.94□□□□□ -1.46
HMG20A-203ENST00000558176 CYB5RLQ6IPT4 315 aa5.94□□□□□ -1.46
HMG20A-203ENST00000558176 ADGRD1Q6QNK2 874 aa5.94□□□□□ -1.46
HMG20A-203ENST00000558176 AQRO60306 1485 aaKnown RBP eCLIP5.94□□□□□ -1.46
HMG20A-203ENST00000558176 ABCC8Q09428 1581 aa5.93□□□□□ -1.46
HMG20A-203ENST00000558176 Q6ZNB5 142 aa5.93□□□□□ -1.46
HMG20A-203ENST00000558176 ARAP1Q96P48 1450 aa5.93□□□□□ -1.46
HMG20A-203ENST00000558176 POLA1P09884 1462 aaPredicted RBP5.92□□□□□ -1.46
HMG20A-203ENST00000558176 KDM4FA0A1W2PPD8 638 aa5.92□□□□□ -1.46
HMG20A-203ENST00000558176 TK2O00142 265 aa5.92□□□□□ -1.46
HMG20A-203ENST00000558176 ECM2O94769 699 aaPredicted RBP5.92□□□□□ -1.46
HMG20A-203ENST00000558176 TARBP1Q13395 1621 aaKnown RBP5.92□□□□□ -1.46
HMG20A-203ENST00000558176 RAD54L2Q9Y4B4 1467 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms