RNA–Protein interactions for RNA: ENST00000557996.1

IPO4-202, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-202ENST00000557996 MYO5CQ9NQX4 1742 aa24.1■■□□□ 1.45
IPO4-202ENST00000557996 GPATCH8Q9UKJ3 1502 aaKnown RBP24.09■■□□□ 1.45
IPO4-202ENST00000557996 RAPGEF3O95398 923 aa24.08■■□□□ 1.45
IPO4-202ENST00000557996 DENND4BO75064 1496 aaPredicted RBP24.07■■□□□ 1.44
IPO4-202ENST00000557996 ADGRL1O94910 1474 aa24.06■■□□□ 1.44
IPO4-202ENST00000557996 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
IPO4-202ENST00000557996 CFDP1Q9UEE9 299 aaPredicted RBP24.05■■□□□ 1.44
IPO4-202ENST00000557996 PREX2Q70Z35 1606 aa24.05■■□□□ 1.44
IPO4-202ENST00000557996 NCOA2Q15596 1464 aa24.05■■□□□ 1.44
IPO4-202ENST00000557996 ZNF777Q9ULD5 760 aaPredicted RBP24.02■■□□□ 1.44
IPO4-202ENST00000557996 SUPT6HQ7KZ85 1726 aaKnown RBP24.01■■□□□ 1.43
IPO4-202ENST00000557996 CDC42BPBQ9Y5S2 1711 aa24.01■■□□□ 1.43
IPO4-202ENST00000557996 CDC42BPAQ5VT25 1732 aa23.99■■□□□ 1.43
IPO4-202ENST00000557996 POGZQ7Z3K3 1410 aa23.97■■□□□ 1.43
IPO4-202ENST00000557996 FRMPD1Q5SYB0 1578 aa23.96■■□□□ 1.43
IPO4-202ENST00000557996 AFAP1Q8N556 730 aa23.93■■□□□ 1.42
IPO4-202ENST00000557996 ABCC1P33527 1531 aa23.93■■□□□ 1.42
IPO4-202ENST00000557996 PLEKHH2Q8IVE3 1493 aa23.93■■□□□ 1.42
IPO4-202ENST00000557996 ZNF518AQ6AHZ1 1483 aa23.92■■□□□ 1.42
IPO4-202ENST00000557996 ITSN2Q9NZM3 1697 aa23.92■■□□□ 1.42
IPO4-202ENST00000557996 KIAA1107Q9UPP5 1409 aa23.92■■□□□ 1.42
IPO4-202ENST00000557996 SAMD9LQ8IVG5 1584 aa23.91■■□□□ 1.42
IPO4-202ENST00000557996 ARHGEF12Q9NZN5 1544 aa23.91■■□□□ 1.42
IPO4-202ENST00000557996 RICTORQ6R327 1708 aa23.9■■□□□ 1.42
IPO4-202ENST00000557996 ZNF644Q9H582 1327 aaPredicted RBP23.9■■□□□ 1.42
IPO4-202ENST00000557996 HNRNPMP52272 730 aaKnown RBP eCLIP23.9■■□□□ 1.42
IPO4-202ENST00000557996 TRAPPC8Q9Y2L5 1435 aa23.9■■□□□ 1.42
IPO4-202ENST00000557996 MAGI2Q86UL8 1455 aa23.89■■□□□ 1.42
IPO4-202ENST00000557996 ZMYM4Q5VZL5 1548 aa23.89■■□□□ 1.41
IPO4-202ENST00000557996 MYOM3Q5VTT5 1437 aa23.88■■□□□ 1.41
IPO4-202ENST00000557996 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
IPO4-202ENST00000557996 MIA2Q96PC5 1412 aa23.85■■□□□ 1.41
IPO4-202ENST00000557996 SYCP2Q9BX26 1530 aa23.85■■□□□ 1.41
IPO4-202ENST00000557996 KDM5CP41229 1560 aa23.84■■□□□ 1.41
IPO4-202ENST00000557996 MYT1LQ9UL68 1186 aa23.84■■□□□ 1.41
IPO4-202ENST00000557996 YEATS2Q9ULM3 1422 aa23.83■■□□□ 1.4
IPO4-202ENST00000557996 ZFYVE16Q7Z3T8 1539 aa23.82■■□□□ 1.4
IPO4-202ENST00000557996 CAMSAP2Q08AD1 1489 aa23.81■■□□□ 1.4
IPO4-202ENST00000557996 RSPH4AQ5TD94 716 aa23.81■■□□□ 1.4
IPO4-202ENST00000557996 MBD5Q9P267 1494 aa23.81■■□□□ 1.4
IPO4-202ENST00000557996 MLH3Q9UHC1 1453 aa23.81■■□□□ 1.4
IPO4-202ENST00000557996 ARHGEF40Q8TER5 1519 aa23.79■■□□□ 1.4
IPO4-202ENST00000557996 SPAG9O60271 1321 aaKnown RBP23.79■■□□□ 1.4
IPO4-202ENST00000557996 PPARGC1BQ86YN6 1023 aaKnown RBP23.76■■□□□ 1.39
IPO4-202ENST00000557996 HECW2Q9P2P5 1572 aa23.76■■□□□ 1.39
IPO4-202ENST00000557996 FGD6Q6ZV73 1430 aa23.76■■□□□ 1.39
IPO4-202ENST00000557996 ATP10AO60312 1499 aa23.75■■□□□ 1.39
IPO4-202ENST00000557996 ARID4BQ4LE39 1312 aaPredicted RBP23.73■■□□□ 1.39
IPO4-202ENST00000557996 CCDC141Q6ZP82 1450 aa23.73■■□□□ 1.39
IPO4-202ENST00000557996 C9orf84Q5VXU9 1444 aa23.71■■□□□ 1.39
IPO4-202ENST00000557996 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
IPO4-202ENST00000557996 TSPY4P0CV99 314 aa23.71■■□□□ 1.39
IPO4-202ENST00000557996 TSPY10P0CW01 314 aa23.71■■□□□ 1.39
IPO4-202ENST00000557996 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
IPO4-202ENST00000557996 TCOF1Q13428 1488 aaKnown RBP23.69■■□□□ 1.38
IPO4-202ENST00000557996 RTEL1-TNFRSF6BF6WH68 1400 aa23.69■■□□□ 1.38
IPO4-202ENST00000557996 PTPN23Q9H3S7 1636 aa23.68■■□□□ 1.38
IPO4-202ENST00000557996 DIP2CQ9Y2E4 1556 aa23.68■■□□□ 1.38
IPO4-202ENST00000557996 ATP7AQ04656 1500 aa23.68■■□□□ 1.38
IPO4-202ENST00000557996 KIDINS220Q9ULH0 1771 aa23.66■■□□□ 1.38
IPO4-202ENST00000557996 ABCA6Q8N139 1617 aa23.65■■□□□ 1.38
IPO4-202ENST00000557996 INO80Q9ULG1 1556 aaPredicted RBP23.65■■□□□ 1.38
IPO4-202ENST00000557996 FAM50AQ14320 339 aaKnown RBP23.63■■□□□ 1.37
IPO4-202ENST00000557996 REREQ9P2R6 1566 aa23.63■■□□□ 1.37
IPO4-202ENST00000557996 ABCC5O15440 1437 aa23.6■■□□□ 1.37
IPO4-202ENST00000557996 A2MP01023 1474 aa23.59■■□□□ 1.37
IPO4-202ENST00000557996 MLECQ14165 292 aa23.58■■□□□ 1.37
IPO4-202ENST00000557996 AGLP35573 1532 aa23.58■■□□□ 1.36
IPO4-202ENST00000557996 DAPK1P53355 1430 aa23.58■■□□□ 1.36
IPO4-202ENST00000557996 MAST1Q9Y2H9 1570 aa23.57■■□□□ 1.36
IPO4-202ENST00000557996 SIGLEC1Q9BZZ2 1709 aa23.56■■□□□ 1.36
IPO4-202ENST00000557996 DHX29Q7Z478 1369 aaKnown RBP23.55■■□□□ 1.36
IPO4-202ENST00000557996 BCORL1Q5H9F3 1711 aa23.55■■□□□ 1.36
IPO4-202ENST00000557996 SHANK2Q9UPX8 1470 aa23.55■■□□□ 1.36
IPO4-202ENST00000557996 DNMT1P26358 1616 aaKnown RBP23.54■■□□□ 1.36
IPO4-202ENST00000557996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.36
IPO4-202ENST00000557996 ADAMTSL3P82987 1691 aa23.52■■□□□ 1.36
IPO4-202ENST00000557996 PLXNC1O60486 1568 aa23.51■■□□□ 1.35
IPO4-202ENST00000557996 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
IPO4-202ENST00000557996 ADGBQ8N7X0 1667 aa23.5■■□□□ 1.35
IPO4-202ENST00000557996 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
IPO4-202ENST00000557996 RRP7BPQ9NSQ0 103 aa23.47■■□□□ 1.35
IPO4-202ENST00000557996 ANKRD30AQ9BXX3 1397 aa23.47■■□□□ 1.35
IPO4-202ENST00000557996 CROCC2H7BZ55 1655 aa23.45■■□□□ 1.34
IPO4-202ENST00000557996 KIF15Q9NS87 1388 aa23.45■■□□□ 1.34
IPO4-202ENST00000557996 KIF3BO15066 747 aa23.45■■□□□ 1.34
IPO4-202ENST00000557996 GGT6Q6P531 493 aa23.45■■□□□ 1.34
IPO4-202ENST00000557996 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
IPO4-202ENST00000557996 ESF1Q9H501 851 aaKnown RBP23.44■■□□□ 1.34
IPO4-202ENST00000557996 PTPRMP28827 1452 aa23.43■■□□□ 1.34
IPO4-202ENST00000557996 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
IPO4-202ENST00000557996 PPP6R1Q9UPN7 881 aa23.42■■□□□ 1.34
IPO4-202ENST00000557996 DUOX2Q9NRD8 1548 aa23.42■■□□□ 1.34
IPO4-202ENST00000557996 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
IPO4-202ENST00000557996 PTPRKQ15262 1439 aa23.42■■□□□ 1.34
IPO4-202ENST00000557996 ITGAEP38570 1179 aa23.41■■□□□ 1.34
IPO4-202ENST00000557996 ERBINQ96RT1 1412 aa23.37■■□□□ 1.33
IPO4-202ENST00000557996 CNTLNQ9NXG0 1405 aa23.37■■□□□ 1.33
IPO4-202ENST00000557996 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
IPO4-202ENST00000557996 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms