RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 STK24Q9Y6E0 443 aa11.01□□□□□ -0.65
FOXN3-218ENST00000557718 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
FOXN3-218ENST00000557718 STK25O00506 426 aa10.98□□□□□ -0.65
FOXN3-218ENST00000557718 RGL2O15211 777 aa10.98□□□□□ -0.65
FOXN3-218ENST00000557718 HOXB3P14651 431 aaPredicted RBP10.98□□□□□ -0.65
FOXN3-218ENST00000557718 NLRP6P59044 892 aa10.97□□□□□ -0.65
FOXN3-218ENST00000557718 EMP3P54852 163 aa10.96□□□□□ -0.65
FOXN3-218ENST00000557718 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
FOXN3-218ENST00000557718 TMEM92Q6UXU6 159 aa10.95□□□□□ -0.66
FOXN3-218ENST00000557718 SMARCA4P51532 1647 aa10.95□□□□□ -0.66
FOXN3-218ENST00000557718 MFRPQ9BY79 579 aa10.93□□□□□ -0.66
FOXN3-218ENST00000557718 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
FOXN3-218ENST00000557718 MROH2BQ7Z745 1585 aa10.91□□□□□ -0.66
FOXN3-218ENST00000557718 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.66
FOXN3-218ENST00000557718 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
FOXN3-218ENST00000557718 ZNF710Q8N1W2 664 aa10.9□□□□□ -0.66
FOXN3-218ENST00000557718 POTEB3A0JP26 581 aa10.89□□□□□ -0.67
FOXN3-218ENST00000557718 FAM205CA6NFA0 338 aa10.89□□□□□ -0.67
FOXN3-218ENST00000557718 POTEBQ6S5H4 581 aa10.89□□□□□ -0.67
FOXN3-218ENST00000557718 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
FOXN3-218ENST00000557718 HOXB1P14653 301 aaPredicted RBP10.87□□□□□ -0.67
FOXN3-218ENST00000557718 WIZO95785 1651 aa10.87□□□□□ -0.67
FOXN3-218ENST00000557718 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
FOXN3-218ENST00000557718 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
FOXN3-218ENST00000557718 PEG3Q9GZU2 1588 aa10.82□□□□□ -0.68
FOXN3-218ENST00000557718 SPNS2Q8IVW8 549 aa10.81□□□□□ -0.68
FOXN3-218ENST00000557718 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
FOXN3-218ENST00000557718 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
FOXN3-218ENST00000557718 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
FOXN3-218ENST00000557718 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
FOXN3-218ENST00000557718 ERBB3P21860 1342 aa10.79□□□□□ -0.68
FOXN3-218ENST00000557718 GPR153Q6NV75 609 aa10.77□□□□□ -0.69
FOXN3-218ENST00000557718 KIF3CO14782 793 aa10.76□□□□□ -0.69
FOXN3-218ENST00000557718 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
FOXN3-218ENST00000557718 PPP1R37O75864 691 aa10.75□□□□□ -0.69
FOXN3-218ENST00000557718 MMRN1Q13201 1228 aa10.75□□□□□ -0.69
FOXN3-218ENST00000557718 HS6ST3Q8IZP7 471 aa10.75□□□□□ -0.69
FOXN3-218ENST00000557718 ATAD2BQ9ULI0 1458 aa10.74□□□□□ -0.69
FOXN3-218ENST00000557718 SMARCA2P51531 1590 aa10.73□□□□□ -0.69
FOXN3-218ENST00000557718 VARS2Q5ST30 1063 aaKnown RBP10.73□□□□□ -0.69
FOXN3-218ENST00000557718 ARSIQ5FYB1 569 aa10.72□□□□□ -0.69
FOXN3-218ENST00000557718 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
FOXN3-218ENST00000557718 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
FOXN3-218ENST00000557718 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
FOXN3-218ENST00000557718 TMC2Q8TDI7 906 aa10.69□□□□□ -0.7
FOXN3-218ENST00000557718 SUPT5HO00267 1087 aaKnown RBP10.68□□□□□ -0.7
FOXN3-218ENST00000557718 KHSRPQ92945 711 aaKnown RBP eCLIP10.68□□□□□ -0.75e-7■■■■□ 21.2
FOXN3-218ENST00000557718 NCAPD3P42695 1498 aa10.68□□□□□ -0.7
FOXN3-218ENST00000557718 ZNF687Q8N1G0 1237 aa10.65□□□□□ -0.7
FOXN3-218ENST00000557718 BAZ1BQ9UIG0 1483 aaKnown RBP10.65□□□□□ -0.7
FOXN3-218ENST00000557718 ZNF316A6NFI3 1004 aaPredicted RBP10.63□□□□□ -0.71
FOXN3-218ENST00000557718 SLC34A2O95436 690 aa10.63□□□□□ -0.71
FOXN3-218ENST00000557718 DNAJC5Q9H3Z4 198 aa10.63□□□□□ -0.71
FOXN3-218ENST00000557718 NKX1-1Q15270 411 aaPredicted RBP10.62□□□□□ -0.71
FOXN3-218ENST00000557718 PCDHGA4Q9Y5G9 962 aa10.61□□□□□ -0.71
FOXN3-218ENST00000557718 NUDT7P0C024 238 aa10.6□□□□□ -0.71
FOXN3-218ENST00000557718 GPHNQ9NQX3 736 aaPredicted RBP10.57□□□□□ -0.72
FOXN3-218ENST00000557718 FOXK1P85037 733 aa10.56□□□□□ -0.72
FOXN3-218ENST00000557718 RYDENQ9NUL5 291 aaKnown RBP10.55□□□□□ -0.72
FOXN3-218ENST00000557718 LHX6Q9UPM6 363 aa10.55□□□□□ -0.72
FOXN3-218ENST00000557718 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
FOXN3-218ENST00000557718 PLPP6Q8IY26 295 aa10.54□□□□□ -0.72
FOXN3-218ENST00000557718 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
FOXN3-218ENST00000557718 DSG2Q14126 1118 aa10.52□□□□□ -0.73
FOXN3-218ENST00000557718 PTCD2Q8WV60 388 aaKnown RBP10.52□□□□□ -0.73
FOXN3-218ENST00000557718 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
FOXN3-218ENST00000557718 ANKRD13DQ6ZTN6 518 aa10.49□□□□□ -0.73
FOXN3-218ENST00000557718 LSM11P83369 360 aaKnown RBP eCLIP10.47□□□□□ -0.735e-7■■■□□ 16.1
FOXN3-218ENST00000557718 RNF166Q96A37 237 aaPredicted RBP10.47□□□□□ -0.73
FOXN3-218ENST00000557718 MYT1LQ9UL68 1186 aa10.47□□□□□ -0.73
FOXN3-218ENST00000557718 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
FOXN3-218ENST00000557718 PBX2P40425 430 aa10.46□□□□□ -0.73
FOXN3-218ENST00000557718 POTEEQ6S8J3 1075 aa10.46□□□□□ -0.73
FOXN3-218ENST00000557718 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
FOXN3-218ENST00000557718 PSDA5PKW4 1024 aaPredicted RBP10.44□□□□□ -0.74
FOXN3-218ENST00000557718 PTGER2P43116 358 aa10.44□□□□□ -0.74
FOXN3-218ENST00000557718 AXIN2Q9Y2T1 843 aa10.44□□□□□ -0.74
FOXN3-218ENST00000557718 TBC1D12O60347 775 aa10.43□□□□□ -0.74
FOXN3-218ENST00000557718 NCKAP5LQ9HCH0 1330 aa10.41□□□□□ -0.74
FOXN3-218ENST00000557718 NESP48681 1621 aa10.4□□□□□ -0.74
FOXN3-218ENST00000557718 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
FOXN3-218ENST00000557718 OXER1Q8TDS5 423 aa10.4□□□□□ -0.74
FOXN3-218ENST00000557718 PDE4AP27815 886 aa10.39□□□□□ -0.75
FOXN3-218ENST00000557718 LAMC3Q9Y6N6 1575 aa10.39□□□□□ -0.75
FOXN3-218ENST00000557718 KIF21AQ7Z4S6 1674 aa10.38□□□□□ -0.75
FOXN3-218ENST00000557718 CFTRP13569 1480 aa10.38□□□□□ -0.75
FOXN3-218ENST00000557718 ARHGAP33O14559 1287 aa10.38□□□□□ -0.75
FOXN3-218ENST00000557718 UPF1Q92900 1129 aaKnown RBP eCLIP10.38□□□□□ -0.75
FOXN3-218ENST00000557718 PPP4R3BQ5MIZ7 849 aa10.35□□□□□ -0.75
FOXN3-218ENST00000557718 LARP6Q9BRS8 491 aaKnown RBP10.34□□□□□ -0.75
FOXN3-218ENST00000557718 CADPSQ9ULU8 1353 aa10.34□□□□□ -0.75
FOXN3-218ENST00000557718 PSEN2P49810 448 aa10.33□□□□□ -0.76
FOXN3-218ENST00000557718 ADGRD1Q6QNK2 874 aa10.33□□□□□ -0.76
FOXN3-218ENST00000557718 ABCC8Q09428 1581 aa10.31□□□□□ -0.76
FOXN3-218ENST00000557718 DMRTA1Q5VZB9 504 aa10.31□□□□□ -0.76
FOXN3-218ENST00000557718 DDX27Q96GQ7 796 aaKnown RBP10.31□□□□□ -0.76
FOXN3-218ENST00000557718 TK2O00142 265 aa10.29□□□□□ -0.76
FOXN3-218ENST00000557718 MFSD10Q14728 455 aa10.29□□□□□ -0.76
FOXN3-218ENST00000557718 CADPS2Q86UW7 1296 aa10.28□□□□□ -0.76
FOXN3-218ENST00000557718 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms