RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 TSPOAP1O95153 1857 aa16.26■□□□□ 0.19
HNRNPC-228ENST00000557033 P3H3Q8IVL6 736 aa16.25■□□□□ 0.19
HNRNPC-228ENST00000557033 EPRSP07814 1512 aaKnown RBP16.24■□□□□ 0.19
HNRNPC-228ENST00000557033 RGL2O15211 777 aa16.24■□□□□ 0.19
HNRNPC-228ENST00000557033 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
HNRNPC-228ENST00000557033 KDM6BO15054 1643 aa16.21■□□□□ 0.19
HNRNPC-228ENST00000557033 KIF21BO75037 1637 aa16.21■□□□□ 0.19
HNRNPC-228ENST00000557033 WDR7Q9Y4E6 1490 aa16.21■□□□□ 0.19
HNRNPC-228ENST00000557033 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
HNRNPC-228ENST00000557033 MAP3K4Q9Y6R4 1608 aa16.18■□□□□ 0.18
HNRNPC-228ENST00000557033 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
HNRNPC-228ENST00000557033 TEX14Q8IWB6 1497 aa16.16■□□□□ 0.18
HNRNPC-228ENST00000557033 KCNH8Q96L42 1107 aa16.16■□□□□ 0.18
HNRNPC-228ENST00000557033 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
HNRNPC-228ENST00000557033 ATP10BO94823 1461 aa16.16■□□□□ 0.18
HNRNPC-228ENST00000557033 RANGAP1P46060 587 aaPredicted RBP16.15■□□□□ 0.18
HNRNPC-228ENST00000557033 UBTFP17480 764 aaKnown RBP16.13■□□□□ 0.17
HNRNPC-228ENST00000557033 EFCAB5A4FU69 1503 aa16.12■□□□□ 0.17
HNRNPC-228ENST00000557033 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
HNRNPC-228ENST00000557033 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
HNRNPC-228ENST00000557033 CFAP43Q8NDM7 1665 aa16.11■□□□□ 0.17
HNRNPC-228ENST00000557033 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
HNRNPC-228ENST00000557033 ARID3CA6NKF2 412 aa16.1■□□□□ 0.17
HNRNPC-228ENST00000557033 FHOD3Q2V2M9 1422 aa16.1■□□□□ 0.17
HNRNPC-228ENST00000557033 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
HNRNPC-228ENST00000557033 COL17A1Q9UMD9 1497 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-228ENST00000557033 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
HNRNPC-228ENST00000557033 PLCD3Q8N3E9 789 aa16.06■□□□□ 0.16
HNRNPC-228ENST00000557033 PLEKHD1A6NEE1 506 aa16.05■□□□□ 0.16
HNRNPC-228ENST00000557033 CHGAP10645 457 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-228ENST00000557033 CAPN15O75808 1086 aa16.03■□□□□ 0.16
HNRNPC-228ENST00000557033 PHLDB1Q86UU1 1377 aa16.01■□□□□ 0.15
HNRNPC-228ENST00000557033 ABCA9Q8IUA7 1624 aa16.01■□□□□ 0.15
HNRNPC-228ENST00000557033 NBR1Q14596 966 aa16.01■□□□□ 0.15
HNRNPC-228ENST00000557033 KDM4FA0A1W2PPD8 638 aa16■□□□□ 0.15
HNRNPC-228ENST00000557033 FMN1Q68DA7 1419 aa16■□□□□ 0.15
HNRNPC-228ENST00000557033 ARHGAP35Q9NRY4 1499 aa15.98■□□□□ 0.15
HNRNPC-228ENST00000557033 ARAP3Q8WWN8 1544 aa15.98■□□□□ 0.15
HNRNPC-228ENST00000557033 MIER1Q8N108 512 aa15.96■□□□□ 0.15
HNRNPC-228ENST00000557033 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
HNRNPC-228ENST00000557033 NEO1Q92859 1461 aa15.94■□□□□ 0.14
HNRNPC-228ENST00000557033 ATP1B4Q9UN42 357 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-228ENST00000557033 CDK11AQ9UQ88 783 aaPredicted RBP15.93■□□□□ 0.14
HNRNPC-228ENST00000557033 TIMELESSQ9UNS1 1208 aa15.92■□□□□ 0.14
HNRNPC-228ENST00000557033 CIZ1Q9ULV3 898 aaPredicted RBP15.91■□□□□ 0.14
HNRNPC-228ENST00000557033 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
HNRNPC-228ENST00000557033 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
HNRNPC-228ENST00000557033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.131e-13■■■□□ 15.2
HNRNPC-228ENST00000557033 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
HNRNPC-228ENST00000557033 TULP1O00294 542 aaPredicted RBP15.87■□□□□ 0.13
HNRNPC-228ENST00000557033 RAPGEF3O95398 923 aa15.86■□□□□ 0.13
HNRNPC-228ENST00000557033 AKNAQ7Z591 1439 aa15.85■□□□□ 0.13
HNRNPC-228ENST00000557033 FANCAO15360 1455 aa15.84■□□□□ 0.13
HNRNPC-228ENST00000557033 ABCB7O75027 752 aa15.84■□□□□ 0.13
HNRNPC-228ENST00000557033 HS6ST3Q8IZP7 471 aa15.84■□□□□ 0.13
HNRNPC-228ENST00000557033 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
HNRNPC-228ENST00000557033 GTF3C3Q9Y5Q9 886 aa15.84■□□□□ 0.13
HNRNPC-228ENST00000557033 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.13
HNRNPC-228ENST00000557033 PLCH2O75038 1416 aa15.83■□□□□ 0.12
HNRNPC-228ENST00000557033 CASKIN1Q8WXD9 1431 aa15.83■□□□□ 0.12
HNRNPC-228ENST00000557033 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
HNRNPC-228ENST00000557033 DENND4BO75064 1496 aaPredicted RBP15.82■□□□□ 0.12
HNRNPC-228ENST00000557033 TTC37Q6PGP7 1564 aa15.82■□□□□ 0.12
HNRNPC-228ENST00000557033 CLIP1P30622 1438 aa15.81■□□□□ 0.12
HNRNPC-228ENST00000557033 TROQ12816 1431 aaPredicted RBP15.81■□□□□ 0.12
HNRNPC-228ENST00000557033 SPDYE2BA6NHP3 402 aa15.8■□□□□ 0.12
HNRNPC-228ENST00000557033 SPDYE6P0CI01 402 aa15.8■□□□□ 0.12
HNRNPC-228ENST00000557033 SPDYE2Q495Y8 402 aa15.8■□□□□ 0.12
HNRNPC-228ENST00000557033 CCDC18Q5T9S5 1454 aa15.79■□□□□ 0.12
HNRNPC-228ENST00000557033 EFCAB2Q5VUJ9 269 aa15.79■□□□□ 0.12
HNRNPC-228ENST00000557033 LRRIQ1Q96JM4 1722 aa15.78■□□□□ 0.12
HNRNPC-228ENST00000557033 ZBTB47Q9UFB7 747 aaPredicted RBP15.78■□□□□ 0.12
HNRNPC-228ENST00000557033 FRMPD1Q5SYB0 1578 aa15.78■□□□□ 0.12
HNRNPC-228ENST00000557033 RICTORQ6R327 1708 aa15.77■□□□□ 0.11
HNRNPC-228ENST00000557033 KIF14Q15058 1648 aa15.76■□□□□ 0.11
HNRNPC-228ENST00000557033 MYO5CQ9NQX4 1742 aa15.76■□□□□ 0.11
HNRNPC-228ENST00000557033 FYCO1Q9BQS8 1478 aa15.76■□□□□ 0.11
HNRNPC-228ENST00000557033 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
HNRNPC-228ENST00000557033 SCAPERQ9BY12 1400 aa15.75■□□□□ 0.11
HNRNPC-228ENST00000557033 MAGI2Q86UL8 1455 aa15.74■□□□□ 0.11
HNRNPC-228ENST00000557033 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
HNRNPC-228ENST00000557033 ZMYM4Q5VZL5 1548 aa15.72■□□□□ 0.11
HNRNPC-228ENST00000557033 ARID4BQ4LE39 1312 aaPredicted RBP15.71■□□□□ 0.11
HNRNPC-228ENST00000557033 ERICH6Q7L0X2 663 aa15.7■□□□□ 0.1
HNRNPC-228ENST00000557033 POGZQ7Z3K3 1410 aa15.69■□□□□ 0.1
HNRNPC-228ENST00000557033 ARHGAP5Q13017 1502 aa15.69■□□□□ 0.1
HNRNPC-228ENST00000557033 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
HNRNPC-228ENST00000557033 ARHGEF40Q8TER5 1519 aa15.68■□□□□ 0.1
HNRNPC-228ENST00000557033 ADAMTSL3P82987 1691 aa15.68■□□□□ 0.1
HNRNPC-228ENST00000557033 ZFYVE16Q7Z3T8 1539 aa15.68■□□□□ 0.1
HNRNPC-228ENST00000557033 BCORL1Q5H9F3 1711 aa15.66■□□□□ 0.1
HNRNPC-228ENST00000557033 CDC42BPBQ9Y5S2 1711 aa15.66■□□□□ 0.1
HNRNPC-228ENST00000557033 RNF25Q96BH1 459 aaPredicted RBP15.66■□□□□ 0.1
HNRNPC-228ENST00000557033 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
HNRNPC-228ENST00000557033 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
HNRNPC-228ENST00000557033 NKX1-1Q15270 411 aaPredicted RBP15.65■□□□□ 0.1
HNRNPC-228ENST00000557033 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
HNRNPC-228ENST00000557033 ARXQ96QS3 562 aa15.65■□□□□ 0.1
HNRNPC-228ENST00000557033 YEATS2Q9ULM3 1422 aa15.65■□□□□ 0.1
HNRNPC-228ENST00000557033 PREX2Q70Z35 1606 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms