RNA–Protein interactions for RNA: ENST00000556989.1

NUMB-224, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-224ENST00000556989 HECW1Q76N89 1606 aa9.71□□□□□ -0.85
NUMB-224ENST00000556989 FMN1Q68DA7 1419 aa9.7□□□□□ -0.86
NUMB-224ENST00000556989 RAPGEF6Q8TEU7 1601 aa9.69□□□□□ -0.86
NUMB-224ENST00000556989 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
NUMB-224ENST00000556989 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
NUMB-224ENST00000556989 RTN4Q9NQC3 1192 aaKnown RBP9.69□□□□□ -0.86
NUMB-224ENST00000556989 ERCC6L2Q5T890 1561 aa9.69□□□□□ -0.86
NUMB-224ENST00000556989 P3H3Q8IVL6 736 aa9.66□□□□□ -0.86
NUMB-224ENST00000556989 ZRANB1Q9UGI0 708 aa9.66□□□□□ -0.86
NUMB-224ENST00000556989 ABCA8O94911 1581 aa9.66□□□□□ -0.86
NUMB-224ENST00000556989 CARMIL2Q6F5E8 1435 aa9.65□□□□□ -0.86
NUMB-224ENST00000556989 NPM1P06748 294 aaKnown RBP eCLIP9.65□□□□□ -0.86
NUMB-224ENST00000556989 PRG4Q92954 1404 aaPredicted RBP9.64□□□□□ -0.87
NUMB-224ENST00000556989 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
NUMB-224ENST00000556989 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
NUMB-224ENST00000556989 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
NUMB-224ENST00000556989 NUP153P49790 1475 aaKnown RBP9.62□□□□□ -0.87
NUMB-224ENST00000556989 PAK3O75914 559 aaPredicted RBP9.62□□□□□ -0.87
NUMB-224ENST00000556989 CDK13Q14004 1512 aaKnown RBP9.62□□□□□ -0.87
NUMB-224ENST00000556989 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
NUMB-224ENST00000556989 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
NUMB-224ENST00000556989 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
NUMB-224ENST00000556989 EHBP1L1Q8N3D4 1523 aa9.61□□□□□ -0.87
NUMB-224ENST00000556989 PLB1Q6P1J6 1458 aa9.61□□□□□ -0.87
NUMB-224ENST00000556989 ZNF579Q8NAF0 562 aaKnown RBP9.61□□□□□ -0.87
NUMB-224ENST00000556989 SUPT6HQ7KZ85 1726 aaKnown RBP9.6□□□□□ -0.87
NUMB-224ENST00000556989 CLCN6P51797 869 aa9.59□□□□□ -0.87
NUMB-224ENST00000556989 ADCY10Q96PN6 1610 aa9.58□□□□□ -0.88
NUMB-224ENST00000556989 PLEKHG5O94827 1062 aa9.58□□□□□ -0.88
NUMB-224ENST00000556989 PPARGC1BQ86YN6 1023 aaKnown RBP9.58□□□□□ -0.88
NUMB-224ENST00000556989 MIER1Q8N108 512 aa9.57□□□□□ -0.88
NUMB-224ENST00000556989 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
NUMB-224ENST00000556989 ARHGEF11O15085 1522 aa9.56□□□□□ -0.88
NUMB-224ENST00000556989 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
NUMB-224ENST00000556989 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
NUMB-224ENST00000556989 AMER1Q5JTC6 1135 aaPredicted RBP9.55□□□□□ -0.88
NUMB-224ENST00000556989 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
NUMB-224ENST00000556989 PTPRGP23470 1445 aa9.54□□□□□ -0.88
NUMB-224ENST00000556989 KIF14Q15058 1648 aa9.54□□□□□ -0.88
NUMB-224ENST00000556989 TRIM26Q12899 539 aaPredicted RBP9.53□□□□□ -0.88
NUMB-224ENST00000556989 PHF12Q96QT6 1004 aa9.53□□□□□ -0.88
NUMB-224ENST00000556989 UHRF1BP1LA0JNW5 1464 aa9.53□□□□□ -0.88
NUMB-224ENST00000556989 UACAQ9BZF9 1416 aa9.53□□□□□ -0.88
NUMB-224ENST00000556989 PLCD3Q8N3E9 789 aa9.53□□□□□ -0.88
NUMB-224ENST00000556989 ITSN2Q9NZM3 1697 aa9.52□□□□□ -0.88
NUMB-224ENST00000556989 RRBP1Q9P2E9 1410 aaKnown RBP9.52□□□□□ -0.89
NUMB-224ENST00000556989 RIMBP3CA6NJZ7 1639 aa9.52□□□□□ -0.89
NUMB-224ENST00000556989 RIMBP3BA6NNM3 1639 aa9.52□□□□□ -0.89
NUMB-224ENST00000556989 RIMBP3Q9UFD9 1639 aa9.52□□□□□ -0.89
NUMB-224ENST00000556989 NCOA2Q15596 1464 aa9.52□□□□□ -0.89
NUMB-224ENST00000556989 CDC42BPAQ5VT25 1732 aa9.51□□□□□ -0.89
NUMB-224ENST00000556989 DCBLD2Q96PD2 775 aa9.51□□□□□ -0.89
NUMB-224ENST00000556989 ATP10BO94823 1461 aa9.51□□□□□ -0.89
NUMB-224ENST00000556989 MTUS2Q5JR59 1369 aa9.51□□□□□ -0.89
NUMB-224ENST00000556989 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
NUMB-224ENST00000556989 ATP1B4Q9UN42 357 aaPredicted RBP9.5□□□□□ -0.89
NUMB-224ENST00000556989 KDM5BQ9UGL1 1544 aa9.49□□□□□ -0.89
NUMB-224ENST00000556989 GALR2O43603 387 aaPredicted RBP9.49□□□□□ -0.89
NUMB-224ENST00000556989 POTEIP0CG38 1075 aa9.49□□□□□ -0.89
NUMB-224ENST00000556989 PCGF6Q9BYE7 350 aa9.49□□□□□ -0.89
NUMB-224ENST00000556989 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
NUMB-224ENST00000556989 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
NUMB-224ENST00000556989 PTPN23Q9H3S7 1636 aa9.48□□□□□ -0.89
NUMB-224ENST00000556989 PREX2Q70Z35 1606 aa9.47□□□□□ -0.89
NUMB-224ENST00000556989 TTC37Q6PGP7 1564 aa9.47□□□□□ -0.89
NUMB-224ENST00000556989 MYO5CQ9NQX4 1742 aa9.46□□□□□ -0.89
NUMB-224ENST00000556989 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.89
NUMB-224ENST00000556989 CDC42BPBQ9Y5S2 1711 aa9.46□□□□□ -0.9
NUMB-224ENST00000556989 ARID3CA6NKF2 412 aa9.46□□□□□ -0.9
NUMB-224ENST00000556989 FGD6Q6ZV73 1430 aa9.45□□□□□ -0.9
NUMB-224ENST00000556989 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
NUMB-224ENST00000556989 ABCC10Q5T3U5 1492 aa9.45□□□□□ -0.9
NUMB-224ENST00000556989 CROCC2H7BZ55 1655 aa9.44□□□□□ -0.9
NUMB-224ENST00000556989 ZBTB47Q9UFB7 747 aaPredicted RBP9.44□□□□□ -0.9
NUMB-224ENST00000556989 TCOF1Q13428 1488 aaKnown RBP9.43□□□□□ -0.9
NUMB-224ENST00000556989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.43□□□□□ -0.9
NUMB-224ENST00000556989 FBXO3Q9UK99 471 aa9.42□□□□□ -0.9
NUMB-224ENST00000556989 RASEFQ8IZ41 740 aa9.42□□□□□ -0.9
NUMB-224ENST00000556989 DNMT1P26358 1616 aaKnown RBP9.41□□□□□ -0.9
NUMB-224ENST00000556989 LHX8Q68G74 356 aa9.41□□□□□ -0.9
NUMB-224ENST00000556989 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
NUMB-224ENST00000556989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.41□□□□□ -0.9
NUMB-224ENST00000556989 ABCA9Q8IUA7 1624 aa9.41□□□□□ -0.9
NUMB-224ENST00000556989 MIA2Q96PC5 1412 aa9.41□□□□□ -0.9
NUMB-224ENST00000556989 GCC2Q8IWJ2 1684 aa9.4□□□□□ -0.9
NUMB-224ENST00000556989 WDR7Q9Y4E6 1490 aa9.4□□□□□ -0.9
NUMB-224ENST00000556989 GPATCH8Q9UKJ3 1502 aaKnown RBP9.4□□□□□ -0.91
NUMB-224ENST00000556989 MS4A3Q96HJ5 214 aa9.4□□□□□ -0.91
NUMB-224ENST00000556989 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
NUMB-224ENST00000556989 CDK11AQ9UQ88 783 aaPredicted RBP9.39□□□□□ -0.91
NUMB-224ENST00000556989 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
NUMB-224ENST00000556989 SAMD9LQ8IVG5 1584 aa9.39□□□□□ -0.91
NUMB-224ENST00000556989 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
NUMB-224ENST00000556989 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
NUMB-224ENST00000556989 ASXL2Q76L83 1435 aa9.36□□□□□ -0.91
NUMB-224ENST00000556989 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
NUMB-224ENST00000556989 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
NUMB-224ENST00000556989 ARHGEF5Q12774 1597 aa9.35□□□□□ -0.91
NUMB-224ENST00000556989 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
NUMB-224ENST00000556989 NUBP1P53384 320 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms