RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 MAGI2Q86UL8 1455 aa15.13■□□□□ 0.01
HNRNPC-227ENST00000556897 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
HNRNPC-227ENST00000556897 SCAPERQ9BY12 1400 aa15.11■□□□□ 0.01
HNRNPC-227ENST00000556897 PLCH2O75038 1416 aa15.1■□□□□ 0.01
HNRNPC-227ENST00000556897 ATP1B4Q9UN42 357 aaPredicted RBP15.08■□□□□ 0
HNRNPC-227ENST00000556897 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0
HNRNPC-227ENST00000556897 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
HNRNPC-227ENST00000556897 CERKQ8TCT0 537 aa15.06■□□□□ 0
HNRNPC-227ENST00000556897 ATP10AO60312 1499 aa15.06■□□□□ 0
HNRNPC-227ENST00000556897 EFCAB2Q5VUJ9 269 aa15.05■□□□□ -0
HNRNPC-227ENST00000556897 C9orf84Q5VXU9 1444 aa15.05■□□□□ -0
HNRNPC-227ENST00000556897 ARHGEF12Q9NZN5 1544 aa15.04■□□□□ -0
HNRNPC-227ENST00000556897 UBTFP17480 764 aaKnown RBP15.04■□□□□ -0
HNRNPC-227ENST00000556897 CEBPAP49715 358 aaPredicted RBP15.04■□□□□ -0
HNRNPC-227ENST00000556897 FMN1Q68DA7 1419 aa15.03■□□□□ -0
HNRNPC-227ENST00000556897 MYO5CQ9NQX4 1742 aa15.03■□□□□ -0
HNRNPC-227ENST00000556897 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
HNRNPC-227ENST00000556897 KIF14Q15058 1648 aa15.02□□□□□ -0.01
HNRNPC-227ENST00000556897 AFAP1Q8N556 730 aa15.01□□□□□ -0.01
HNRNPC-227ENST00000556897 ARHGAP35Q9NRY4 1499 aa15.01□□□□□ -0.01
HNRNPC-227ENST00000556897 ZNF518AQ6AHZ1 1483 aa15□□□□□ -0.01
HNRNPC-227ENST00000556897 ARHGAP5Q13017 1502 aa14.99□□□□□ -0.01
HNRNPC-227ENST00000556897 PREX1Q8TCU6 1659 aa14.99□□□□□ -0.01
HNRNPC-227ENST00000556897 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
HNRNPC-227ENST00000556897 TROQ12816 1431 aaPredicted RBP14.98□□□□□ -0.01
HNRNPC-227ENST00000556897 KDM5CP41229 1560 aa14.97□□□□□ -0.01
HNRNPC-227ENST00000556897 CLIP1P30622 1438 aa14.96□□□□□ -0.01
HNRNPC-227ENST00000556897 UHRF1BP1Q6BDS2 1440 aa14.94□□□□□ -0.02
HNRNPC-227ENST00000556897 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
HNRNPC-227ENST00000556897 DIP2CQ9Y2E4 1556 aa14.94□□□□□ -0.02
HNRNPC-227ENST00000556897 STRCQ7RTU9 1775 aa14.93□□□□□ -0.02
HNRNPC-227ENST00000556897 SETD1BQ9UPS6 1966 aaKnown RBP14.92□□□□□ -0.02
HNRNPC-227ENST00000556897 LRRIQ1Q96JM4 1722 aa14.92□□□□□ -0.02
HNRNPC-227ENST00000556897 MLH3Q9UHC1 1453 aa14.91□□□□□ -0.02
HNRNPC-227ENST00000556897 CDC42BPBQ9Y5S2 1711 aa14.91□□□□□ -0.02
HNRNPC-227ENST00000556897 ABCA6Q8N139 1617 aa14.91□□□□□ -0.02
HNRNPC-227ENST00000556897 TRAPPC8Q9Y2L5 1435 aa14.91□□□□□ -0.02
HNRNPC-227ENST00000556897 REREQ9P2R6 1566 aa14.9□□□□□ -0.02
HNRNPC-227ENST00000556897 ESF1Q9H501 851 aaKnown RBP14.89□□□□□ -0.03
HNRNPC-227ENST00000556897 ABCC1P33527 1531 aa14.88□□□□□ -0.03
HNRNPC-227ENST00000556897 C3P01024 1663 aa14.88□□□□□ -0.03
HNRNPC-227ENST00000556897 AGLP35573 1532 aa14.87□□□□□ -0.03
HNRNPC-227ENST00000556897 DISP3Q9P2K9 1392 aa14.87□□□□□ -0.03
HNRNPC-227ENST00000556897 PREX2Q70Z35 1606 aa14.87□□□□□ -0.03
HNRNPC-227ENST00000556897 PTPRTO14522 1441 aa14.85□□□□□ -0.03
HNRNPC-227ENST00000556897 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
HNRNPC-227ENST00000556897 ITSN2Q9NZM3 1697 aa14.84□□□□□ -0.03
HNRNPC-227ENST00000556897 CCDC18Q5T9S5 1454 aa14.84□□□□□ -0.03
HNRNPC-227ENST00000556897 ILDR2Q71H61 639 aa14.84□□□□□ -0.03
HNRNPC-227ENST00000556897 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.03
HNRNPC-227ENST00000556897 ZNF777Q9ULD5 760 aaPredicted RBP14.82□□□□□ -0.04
HNRNPC-227ENST00000556897 CNTLNQ9NXG0 1405 aa14.82□□□□□ -0.04
HNRNPC-227ENST00000556897 CDC42BPAQ5VT25 1732 aa14.81□□□□□ -0.04
HNRNPC-227ENST00000556897 NCOA1Q15788 1441 aa14.81□□□□□ -0.04
HNRNPC-227ENST00000556897 LTBP4Q8N2S1 1624 aa14.81□□□□□ -0.04
HNRNPC-227ENST00000556897 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
HNRNPC-227ENST00000556897 ZMYM3Q14202 1370 aa14.78□□□□□ -0.04
HNRNPC-227ENST00000556897 SPAG9O60271 1321 aaKnown RBP14.78□□□□□ -0.04
HNRNPC-227ENST00000556897 SYCP2Q9BX26 1530 aa14.77□□□□□ -0.04
HNRNPC-227ENST00000556897 NPATQ14207 1427 aa14.77□□□□□ -0.04
HNRNPC-227ENST00000556897 SOCS7O14512 581 aa14.77□□□□□ -0.05
HNRNPC-227ENST00000556897 HNRNPMP52272 730 aaKnown RBP eCLIP14.77□□□□□ -0.055e-7■■■■□ 19.9
HNRNPC-227ENST00000556897 CAMSAP1Q5T5Y3 1602 aa14.77□□□□□ -0.05
HNRNPC-227ENST00000556897 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
HNRNPC-227ENST00000556897 FYCO1Q9BQS8 1478 aa14.76□□□□□ -0.05
HNRNPC-227ENST00000556897 SUPT6HQ7KZ85 1726 aaKnown RBP14.75□□□□□ -0.05
HNRNPC-227ENST00000556897 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
HNRNPC-227ENST00000556897 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
HNRNPC-227ENST00000556897 SPATA31D1Q6ZQQ2 1576 aa14.74□□□□□ -0.05
HNRNPC-227ENST00000556897 IQSEC2Q5JU85 1478 aa14.74□□□□□ -0.05
HNRNPC-227ENST00000556897 ATP7AQ04656 1500 aa14.73□□□□□ -0.05
HNRNPC-227ENST00000556897 CFDP1Q9UEE9 299 aaPredicted RBP14.73□□□□□ -0.05
HNRNPC-227ENST00000556897 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
HNRNPC-227ENST00000556897 KIAA1107Q9UPP5 1409 aa14.72□□□□□ -0.05
HNRNPC-227ENST00000556897 CLTCQ00610 1675 aaKnown RBP14.71□□□□□ -0.05
HNRNPC-227ENST00000556897 A2MP01023 1474 aa14.71□□□□□ -0.05
HNRNPC-227ENST00000556897 GGT6Q6P531 493 aa14.71□□□□□ -0.05
HNRNPC-227ENST00000556897 PLXNC1O60486 1568 aa14.71□□□□□ -0.05
HNRNPC-227ENST00000556897 INO80Q9ULG1 1556 aaPredicted RBP14.7□□□□□ -0.06
HNRNPC-227ENST00000556897 CCNB3Q8WWL7 1395 aa14.7□□□□□ -0.06
HNRNPC-227ENST00000556897 PLEKHH2Q8IVE3 1493 aa14.69□□□□□ -0.06
HNRNPC-227ENST00000556897 PTPRKQ15262 1439 aa14.69□□□□□ -0.06
HNRNPC-227ENST00000556897 MYO3AQ8NEV4 1616 aa14.69□□□□□ -0.06
HNRNPC-227ENST00000556897 PKD2Q13563 968 aa14.68□□□□□ -0.06
HNRNPC-227ENST00000556897 PLA2R1Q13018 1463 aa14.68□□□□□ -0.06
HNRNPC-227ENST00000556897 CEP170BQ9Y4F5 1589 aaPredicted RBP14.68□□□□□ -0.06
HNRNPC-227ENST00000556897 UBAP1LF5GYI3 381 aa14.67□□□□□ -0.06
HNRNPC-227ENST00000556897 ZNF142P52746 1687 aaPredicted RBP14.67□□□□□ -0.06
HNRNPC-227ENST00000556897 ZNF644Q9H582 1327 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-227ENST00000556897 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-227ENST00000556897 MTUS2Q5JR59 1369 aa14.66□□□□□ -0.06
HNRNPC-227ENST00000556897 PPP6R1Q9UPN7 881 aa14.64□□□□□ -0.07
HNRNPC-227ENST00000556897 ADGBQ8N7X0 1667 aa14.62□□□□□ -0.07
HNRNPC-227ENST00000556897 MBD5Q9P267 1494 aa14.62□□□□□ -0.07
HNRNPC-227ENST00000556897 A2ML1A8K2U0 1454 aa14.61□□□□□ -0.07
HNRNPC-227ENST00000556897 TIAM1Q13009 1591 aa14.6□□□□□ -0.07
HNRNPC-227ENST00000556897 FBXO31Q5XUX0 539 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-227ENST00000556897 DNMT1P26358 1616 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-227ENST00000556897 DHX29Q7Z478 1369 aaKnown RBP14.59□□□□□ -0.07
HNRNPC-227ENST00000556897 RTEL1-TNFRSF6BF6WH68 1400 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms