RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 ABCA8O94911 1581 aa11.86□□□□□ -0.51
PCNX1-213ENST00000556846 CD109Q6YHK3 1445 aa11.86□□□□□ -0.51
PCNX1-213ENST00000556846 KDM4FA0A1W2PPD8 638 aa11.83□□□□□ -0.52
PCNX1-213ENST00000556846 ATP10BO94823 1461 aa11.83□□□□□ -0.52
PCNX1-213ENST00000556846 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
PCNX1-213ENST00000556846 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
PCNX1-213ENST00000556846 MAP3K4Q9Y6R4 1608 aa11.81□□□□□ -0.52
PCNX1-213ENST00000556846 COL17A1Q9UMD9 1497 aaPredicted RBP11.81□□□□□ -0.52
PCNX1-213ENST00000556846 FHOD3Q2V2M9 1422 aa11.8□□□□□ -0.52
PCNX1-213ENST00000556846 PPRC1Q5VV67 1664 aaKnown RBP11.79□□□□□ -0.52
PCNX1-213ENST00000556846 SAMD9Q5K651 1589 aa11.79□□□□□ -0.52
PCNX1-213ENST00000556846 MAGI3Q5TCQ9 1506 aa11.78□□□□□ -0.52
PCNX1-213ENST00000556846 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
PCNX1-213ENST00000556846 KIF21BO75037 1637 aa11.75□□□□□ -0.53
PCNX1-213ENST00000556846 RAPGEF6Q8TEU7 1601 aa11.75□□□□□ -0.53
PCNX1-213ENST00000556846 NUP153P49790 1475 aaKnown RBP11.74□□□□□ -0.53
PCNX1-213ENST00000556846 CFAP43Q8NDM7 1665 aa11.74□□□□□ -0.53
PCNX1-213ENST00000556846 EFCAB5A4FU69 1503 aa11.72□□□□□ -0.53
PCNX1-213ENST00000556846 PHLDB1Q86UU1 1377 aa11.72□□□□□ -0.53
PCNX1-213ENST00000556846 RAPGEF3O95398 923 aa11.72□□□□□ -0.53
PCNX1-213ENST00000556846 ADGRL1O94910 1474 aa11.71□□□□□ -0.53
PCNX1-213ENST00000556846 CDK11AQ9UQ88 783 aaPredicted RBP11.7□□□□□ -0.54
PCNX1-213ENST00000556846 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
PCNX1-213ENST00000556846 ARAP3Q8WWN8 1544 aa11.68□□□□□ -0.54
PCNX1-213ENST00000556846 ABCA9Q8IUA7 1624 aa11.68□□□□□ -0.54
PCNX1-213ENST00000556846 ARID4BQ4LE39 1312 aaPredicted RBP11.67□□□□□ -0.54
PCNX1-213ENST00000556846 GABBR2O75899 941 aa11.67□□□□□ -0.54
PCNX1-213ENST00000556846 NEO1Q92859 1461 aa11.66□□□□□ -0.54
PCNX1-213ENST00000556846 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
PCNX1-213ENST00000556846 CDK13Q14004 1512 aaKnown RBP11.64□□□□□ -0.55
PCNX1-213ENST00000556846 AKNAQ7Z591 1439 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 EFCAB2Q5VUJ9 269 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 FANCAO15360 1455 aa11.62□□□□□ -0.55
PCNX1-213ENST00000556846 DENND4BO75064 1496 aaPredicted RBP11.62□□□□□ -0.55
PCNX1-213ENST00000556846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.61□□□□□ -0.55
PCNX1-213ENST00000556846 HECW1Q76N89 1606 aa11.6□□□□□ -0.55
PCNX1-213ENST00000556846 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
PCNX1-213ENST00000556846 MYT1LQ9UL68 1186 aa11.59□□□□□ -0.55
PCNX1-213ENST00000556846 PLCH2O75038 1416 aa11.59□□□□□ -0.55
PCNX1-213ENST00000556846 CLIP1P30622 1438 aa11.59□□□□□ -0.55
PCNX1-213ENST00000556846 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
PCNX1-213ENST00000556846 ZBTB22O15209 634 aa11.57□□□□□ -0.56
PCNX1-213ENST00000556846 TROQ12816 1431 aaPredicted RBP11.56□□□□□ -0.56
PCNX1-213ENST00000556846 TTC37Q6PGP7 1564 aa11.56□□□□□ -0.56
PCNX1-213ENST00000556846 MLECQ14165 292 aa11.55□□□□□ -0.56
PCNX1-213ENST00000556846 CFAP74Q9C0B2 1584 aa11.54□□□□□ -0.56
PCNX1-213ENST00000556846 CASKIN1Q8WXD9 1431 aa11.54□□□□□ -0.56
PCNX1-213ENST00000556846 C19orf67A6NJJ6 358 aa11.54□□□□□ -0.56
PCNX1-213ENST00000556846 PRKAR2AP13861 404 aaKnown RBP11.53□□□□□ -0.56
PCNX1-213ENST00000556846 FRMPD1Q5SYB0 1578 aa11.53□□□□□ -0.56
PCNX1-213ENST00000556846 POGZQ7Z3K3 1410 aa11.52□□□□□ -0.56
PCNX1-213ENST00000556846 AFAP1Q8N556 730 aa11.52□□□□□ -0.57
PCNX1-213ENST00000556846 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
PCNX1-213ENST00000556846 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 ARHGAP5Q13017 1502 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 KIF14Q15058 1648 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 YEATS2Q9ULM3 1422 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 PTPRMP28827 1452 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 MAGI2Q86UL8 1455 aa11.51□□□□□ -0.57
PCNX1-213ENST00000556846 ZFYVE16Q7Z3T8 1539 aa11.5□□□□□ -0.57
PCNX1-213ENST00000556846 SPDYE1Q8NFV5 336 aaPredicted RBP11.5□□□□□ -0.57
PCNX1-213ENST00000556846 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
PCNX1-213ENST00000556846 ATP10AO60312 1499 aa11.48□□□□□ -0.57
PCNX1-213ENST00000556846 PCF11O94913 1555 aaKnown RBP11.48□□□□□ -0.57
PCNX1-213ENST00000556846 RICTORQ6R327 1708 aa11.48□□□□□ -0.57
PCNX1-213ENST00000556846 ARHGEF40Q8TER5 1519 aa11.47□□□□□ -0.57
PCNX1-213ENST00000556846 FYCO1Q9BQS8 1478 aa11.47□□□□□ -0.57
PCNX1-213ENST00000556846 MYO5CQ9NQX4 1742 aa11.46□□□□□ -0.57
PCNX1-213ENST00000556846 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.57
PCNX1-213ENST00000556846 ZMYM4Q5VZL5 1548 aa11.46□□□□□ -0.57
PCNX1-213ENST00000556846 ZNF518AQ6AHZ1 1483 aa11.46□□□□□ -0.57
PCNX1-213ENST00000556846 MTUS2Q5JR59 1369 aa11.45□□□□□ -0.58
PCNX1-213ENST00000556846 ESF1Q9H501 851 aaKnown RBP11.45□□□□□ -0.58
PCNX1-213ENST00000556846 CFDP1Q9UEE9 299 aaPredicted RBP11.45□□□□□ -0.58
PCNX1-213ENST00000556846 BCORL1Q5H9F3 1711 aa11.45□□□□□ -0.58
PCNX1-213ENST00000556846 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 POTEMA6NI47 508 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 MADDQ8WXG6 1647 aa11.44□□□□□ -0.58
PCNX1-213ENST00000556846 CCNB3Q8WWL7 1395 aa11.43□□□□□ -0.58
PCNX1-213ENST00000556846 HNRNPMP52272 730 aaKnown RBP eCLIP11.43□□□□□ -0.58
PCNX1-213ENST00000556846 MKRN4PQ13434 485 aaPredicted RBP11.43□□□□□ -0.58
PCNX1-213ENST00000556846 LRRIQ1Q96JM4 1722 aa11.43□□□□□ -0.58
PCNX1-213ENST00000556846 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
PCNX1-213ENST00000556846 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
PCNX1-213ENST00000556846 CEP162Q5TB80 1403 aa11.42□□□□□ -0.58
PCNX1-213ENST00000556846 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
PCNX1-213ENST00000556846 CEBPAP49715 358 aaPredicted RBP11.41□□□□□ -0.58
PCNX1-213ENST00000556846 HSPA2P54652 639 aa11.41□□□□□ -0.58
PCNX1-213ENST00000556846 RIMS1Q86UR5 1692 aaKnown RBP11.4□□□□□ -0.58
PCNX1-213ENST00000556846 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.59
PCNX1-213ENST00000556846 SPAG9O60271 1321 aaKnown RBP11.39□□□□□ -0.59
PCNX1-213ENST00000556846 MLH3Q9UHC1 1453 aa11.39□□□□□ -0.59
PCNX1-213ENST00000556846 ARHGEF12Q9NZN5 1544 aa11.39□□□□□ -0.59
PCNX1-213ENST00000556846 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 865.3 ms