RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
HNRNPC-226ENST00000556628 SAMD9Q5K651 1589 aa12.76□□□□□ -0.37
HNRNPC-226ENST00000556628 PPRC1Q5VV67 1664 aaKnown RBP12.76□□□□□ -0.37
HNRNPC-226ENST00000556628 KIF21BO75037 1637 aa12.75□□□□□ -0.37
HNRNPC-226ENST00000556628 RANGAP1P46060 587 aaPredicted RBP12.74□□□□□ -0.37
HNRNPC-226ENST00000556628 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
HNRNPC-226ENST00000556628 KCNH8Q96L42 1107 aa12.72□□□□□ -0.37
HNRNPC-226ENST00000556628 RAPGEF6Q8TEU7 1601 aa12.72□□□□□ -0.37
HNRNPC-226ENST00000556628 MKRN4PQ13434 485 aaPredicted RBP12.71□□□□□ -0.37
HNRNPC-226ENST00000556628 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
HNRNPC-226ENST00000556628 CD109Q6YHK3 1445 aa12.7□□□□□ -0.38
HNRNPC-226ENST00000556628 ATP10BO94823 1461 aa12.69□□□□□ -0.38
HNRNPC-226ENST00000556628 EFCAB5A4FU69 1503 aa12.68□□□□□ -0.38
HNRNPC-226ENST00000556628 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
HNRNPC-226ENST00000556628 FHOD3Q2V2M9 1422 aa12.68□□□□□ -0.38
HNRNPC-226ENST00000556628 SPDYE1Q8NFV5 336 aaPredicted RBP12.67□□□□□ -0.38
HNRNPC-226ENST00000556628 MAGI3Q5TCQ9 1506 aa12.67□□□□□ -0.38
HNRNPC-226ENST00000556628 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
HNRNPC-226ENST00000556628 CLEC11AQ9Y240 323 aa12.64□□□□□ -0.39
HNRNPC-226ENST00000556628 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
HNRNPC-226ENST00000556628 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
HNRNPC-226ENST00000556628 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
HNRNPC-226ENST00000556628 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
HNRNPC-226ENST00000556628 PLEKHD1A6NEE1 506 aa12.61□□□□□ -0.39
HNRNPC-226ENST00000556628 KDM4FA0A1W2PPD8 638 aa12.59□□□□□ -0.39
HNRNPC-226ENST00000556628 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
HNRNPC-226ENST00000556628 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
HNRNPC-226ENST00000556628 ATP1B4Q9UN42 357 aaPredicted RBP12.58□□□□□ -0.4
HNRNPC-226ENST00000556628 PHLDB1Q86UU1 1377 aa12.57□□□□□ -0.4
HNRNPC-226ENST00000556628 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
HNRNPC-226ENST00000556628 ARAP3Q8WWN8 1544 aa12.56□□□□□ -0.4
HNRNPC-226ENST00000556628 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
HNRNPC-226ENST00000556628 NEO1Q92859 1461 aa12.55□□□□□ -0.4
HNRNPC-226ENST00000556628 ARHGAP35Q9NRY4 1499 aa12.55□□□□□ -0.4
HNRNPC-226ENST00000556628 CDK13Q14004 1512 aaKnown RBP12.53□□□□□ -0.4
HNRNPC-226ENST00000556628 CFAP74Q9C0B2 1584 aa12.53□□□□□ -0.4
HNRNPC-226ENST00000556628 EVX2Q03828 476 aa12.53□□□□□ -0.4
HNRNPC-226ENST00000556628 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
HNRNPC-226ENST00000556628 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.51□□□□□ -0.411e-13■■■□□ 15.2
HNRNPC-226ENST00000556628 TTC37Q6PGP7 1564 aa12.48□□□□□ -0.41
HNRNPC-226ENST00000556628 FANCAO15360 1455 aa12.48□□□□□ -0.41
HNRNPC-226ENST00000556628 RAPGEF3O95398 923 aa12.48□□□□□ -0.41
HNRNPC-226ENST00000556628 AKNAQ7Z591 1439 aa12.47□□□□□ -0.41
HNRNPC-226ENST00000556628 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.41
HNRNPC-226ENST00000556628 CLIP1P30622 1438 aa12.46□□□□□ -0.41
HNRNPC-226ENST00000556628 MYO5CQ9NQX4 1742 aa12.45□□□□□ -0.42
HNRNPC-226ENST00000556628 KIF14Q15058 1648 aa12.45□□□□□ -0.42
HNRNPC-226ENST00000556628 FRMPD1Q5SYB0 1578 aa12.44□□□□□ -0.42
HNRNPC-226ENST00000556628 RICTORQ6R327 1708 aa12.44□□□□□ -0.42
HNRNPC-226ENST00000556628 LRRIQ1Q96JM4 1722 aa12.44□□□□□ -0.42
HNRNPC-226ENST00000556628 CCDC18Q5T9S5 1454 aa12.43□□□□□ -0.42
HNRNPC-226ENST00000556628 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
HNRNPC-226ENST00000556628 PLCH2O75038 1416 aa12.43□□□□□ -0.42
HNRNPC-226ENST00000556628 TROQ12816 1431 aaPredicted RBP12.43□□□□□ -0.42
HNRNPC-226ENST00000556628 PCF11O94913 1555 aaKnown RBP12.43□□□□□ -0.42
HNRNPC-226ENST00000556628 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
HNRNPC-226ENST00000556628 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
HNRNPC-226ENST00000556628 CASKIN1Q8WXD9 1431 aa12.42□□□□□ -0.42
HNRNPC-226ENST00000556628 EFCAB2Q5VUJ9 269 aa12.41□□□□□ -0.42
HNRNPC-226ENST00000556628 ARHGEF40Q8TER5 1519 aa12.4□□□□□ -0.42
HNRNPC-226ENST00000556628 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.43
HNRNPC-226ENST00000556628 SCAPERQ9BY12 1400 aa12.39□□□□□ -0.43
HNRNPC-226ENST00000556628 ARHGAP5Q13017 1502 aa12.38□□□□□ -0.43
HNRNPC-226ENST00000556628 ZMYM4Q5VZL5 1548 aa12.38□□□□□ -0.43
HNRNPC-226ENST00000556628 BCORL1Q5H9F3 1711 aa12.38□□□□□ -0.43
HNRNPC-226ENST00000556628 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
HNRNPC-226ENST00000556628 MAGI2Q86UL8 1455 aa12.38□□□□□ -0.43
HNRNPC-226ENST00000556628 ZFYVE16Q7Z3T8 1539 aa12.37□□□□□ -0.43
HNRNPC-226ENST00000556628 ADAMTSL3P82987 1691 aa12.37□□□□□ -0.43
HNRNPC-226ENST00000556628 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
HNRNPC-226ENST00000556628 MYT1LQ9UL68 1186 aa12.35□□□□□ -0.43
HNRNPC-226ENST00000556628 HECW2Q9P2P5 1572 aa12.35□□□□□ -0.43
HNRNPC-226ENST00000556628 CDC42BPBQ9Y5S2 1711 aa12.34□□□□□ -0.43
HNRNPC-226ENST00000556628 PREX2Q70Z35 1606 aa12.34□□□□□ -0.43
HNRNPC-226ENST00000556628 ZNF518AQ6AHZ1 1483 aa12.34□□□□□ -0.43
HNRNPC-226ENST00000556628 MADDQ8WXG6 1647 aa12.33□□□□□ -0.43
HNRNPC-226ENST00000556628 YEATS2Q9ULM3 1422 aa12.33□□□□□ -0.44
HNRNPC-226ENST00000556628 PTPRMP28827 1452 aa12.33□□□□□ -0.44
HNRNPC-226ENST00000556628 RIMS1Q86UR5 1692 aaKnown RBP12.32□□□□□ -0.44
HNRNPC-226ENST00000556628 CDC42BPAQ5VT25 1732 aa12.31□□□□□ -0.44
HNRNPC-226ENST00000556628 ATP10AO60312 1499 aa12.3□□□□□ -0.44
HNRNPC-226ENST00000556628 MTUS2Q5JR59 1369 aa12.3□□□□□ -0.44
HNRNPC-226ENST00000556628 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
HNRNPC-226ENST00000556628 C9orf84Q5VXU9 1444 aa12.29□□□□□ -0.44
HNRNPC-226ENST00000556628 MLECQ14165 292 aa12.29□□□□□ -0.44
HNRNPC-226ENST00000556628 AFAP1Q8N556 730 aa12.29□□□□□ -0.44
HNRNPC-226ENST00000556628 ITSN2Q9NZM3 1697 aa12.29□□□□□ -0.44
HNRNPC-226ENST00000556628 KDM5CP41229 1560 aa12.28□□□□□ -0.44
HNRNPC-226ENST00000556628 GABBR2O75899 941 aa12.28□□□□□ -0.44
HNRNPC-226ENST00000556628 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
HNRNPC-226ENST00000556628 FER1L4A9Z1Z3 1794 aa12.28□□□□□ -0.44
HNRNPC-226ENST00000556628 ABCC1P33527 1531 aa12.27□□□□□ -0.44
HNRNPC-226ENST00000556628 SIGLEC1Q9BZZ2 1709 aa12.27□□□□□ -0.45
HNRNPC-226ENST00000556628 CCNB3Q8WWL7 1395 aa12.26□□□□□ -0.45
HNRNPC-226ENST00000556628 MLH3Q9UHC1 1453 aa12.25□□□□□ -0.45
HNRNPC-226ENST00000556628 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
HNRNPC-226ENST00000556628 EHBP1L1Q8N3D4 1523 aa12.24□□□□□ -0.45
HNRNPC-226ENST00000556628 CFDP1Q9UEE9 299 aaPredicted RBP12.24□□□□□ -0.45
HNRNPC-226ENST00000556628 DIP2CQ9Y2E4 1556 aa12.24□□□□□ -0.45
HNRNPC-226ENST00000556628 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms