RNA–Protein interactions for RNA: ENST00000555846.1

SOCS4-204, Transcript of suppressor of cytokine signaling 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS4-204ENST00000555846 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
SOCS4-204ENST00000555846 EFCAB2Q5VUJ9 269 aa13.94□□□□□ -0.18
SOCS4-204ENST00000555846 ACIN1Q9UKV3 1341 aaKnown RBP13.94□□□□□ -0.18
SOCS4-204ENST00000555846 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
SOCS4-204ENST00000555846 CFAP43Q8NDM7 1665 aa13.93□□□□□ -0.18
SOCS4-204ENST00000555846 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
SOCS4-204ENST00000555846 NAIPQ13075 1403 aa13.93□□□□□ -0.18
SOCS4-204ENST00000555846 NUP160Q12769 1436 aa13.92□□□□□ -0.18
SOCS4-204ENST00000555846 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
SOCS4-204ENST00000555846 EIF4G2P78344 907 aaKnown RBP eCLIP13.91□□□□□ -0.18
SOCS4-204ENST00000555846 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
SOCS4-204ENST00000555846 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
SOCS4-204ENST00000555846 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
SOCS4-204ENST00000555846 CYB5RLQ6IPT4 315 aa13.91□□□□□ -0.18
SOCS4-204ENST00000555846 SENP3Q9H4L4 574 aaPredicted RBP13.91□□□□□ -0.18
SOCS4-204ENST00000555846 UACAQ9BZF9 1416 aa13.91□□□□□ -0.18
SOCS4-204ENST00000555846 MIA2Q96PC5 1412 aa13.9□□□□□ -0.18
SOCS4-204ENST00000555846 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
SOCS4-204ENST00000555846 ARHGEF11O15085 1522 aa13.9□□□□□ -0.18
SOCS4-204ENST00000555846 TIMELESSQ9UNS1 1208 aa13.89□□□□□ -0.19
SOCS4-204ENST00000555846 RAPGEF6Q8TEU7 1601 aa13.89□□□□□ -0.19
SOCS4-204ENST00000555846 DAPK1P53355 1430 aa13.87□□□□□ -0.19
SOCS4-204ENST00000555846 ATP10BO94823 1461 aa13.87□□□□□ -0.19
SOCS4-204ENST00000555846 DCAF11Q8TEB1 546 aa13.86□□□□□ -0.19
SOCS4-204ENST00000555846 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
SOCS4-204ENST00000555846 ABCC5O15440 1437 aa13.86□□□□□ -0.19
SOCS4-204ENST00000555846 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
SOCS4-204ENST00000555846 KIF15Q9NS87 1388 aa13.83□□□□□ -0.19
SOCS4-204ENST00000555846 SPAG9O60271 1321 aaKnown RBP13.83□□□□□ -0.19
SOCS4-204ENST00000555846 ANKRD50Q9ULJ7 1429 aa13.82□□□□□ -0.2
SOCS4-204ENST00000555846 SCAF1Q9H7N4 1312 aaKnown RBP13.82□□□□□ -0.2
SOCS4-204ENST00000555846 GPATCH8Q9UKJ3 1502 aaKnown RBP13.82□□□□□ -0.2
SOCS4-204ENST00000555846 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
SOCS4-204ENST00000555846 ARHGAP5Q13017 1502 aa13.81□□□□□ -0.2
SOCS4-204ENST00000555846 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
SOCS4-204ENST00000555846 KIF3BO15066 747 aa13.8□□□□□ -0.2
SOCS4-204ENST00000555846 CARD11Q9BXL7 1154 aa13.8□□□□□ -0.2
SOCS4-204ENST00000555846 MAPKBP1O60336 1514 aa13.8□□□□□ -0.2
SOCS4-204ENST00000555846 GGT6Q6P531 493 aa13.79□□□□□ -0.2
SOCS4-204ENST00000555846 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
SOCS4-204ENST00000555846 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
SOCS4-204ENST00000555846 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
SOCS4-204ENST00000555846 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
SOCS4-204ENST00000555846 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
SOCS4-204ENST00000555846 KIF14Q15058 1648 aa13.74□□□□□ -0.21
SOCS4-204ENST00000555846 NEFLP07196 543 aa13.74□□□□□ -0.21
SOCS4-204ENST00000555846 AKNAQ7Z591 1439 aa13.73□□□□□ -0.21
SOCS4-204ENST00000555846 CHD1O14646 1710 aa13.73□□□□□ -0.21
SOCS4-204ENST00000555846 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
SOCS4-204ENST00000555846 ERCC6L2Q5T890 1561 aa13.72□□□□□ -0.21
SOCS4-204ENST00000555846 BCANQ96GW7 911 aa13.72□□□□□ -0.21
SOCS4-204ENST00000555846 ROCK1Q13464 1354 aa13.72□□□□□ -0.21
SOCS4-204ENST00000555846 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
SOCS4-204ENST00000555846 LRRIQ1Q96JM4 1722 aa13.72□□□□□ -0.21
SOCS4-204ENST00000555846 HNRNPUQ00839 825 aaKnown RBP eCLIP13.71□□□□□ -0.21
SOCS4-204ENST00000555846 MLECQ14165 292 aa13.7□□□□□ -0.22
SOCS4-204ENST00000555846 MRS2Q9HD23 443 aa13.69□□□□□ -0.22
SOCS4-204ENST00000555846 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
SOCS4-204ENST00000555846 SCAPERQ9BY12 1400 aa13.66□□□□□ -0.22
SOCS4-204ENST00000555846 KANK1Q14678 1352 aa13.66□□□□□ -0.22
SOCS4-204ENST00000555846 ANKRD30BQ9BXX2 1392 aa13.66□□□□□ -0.22
SOCS4-204ENST00000555846 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
SOCS4-204ENST00000555846 RAPGEF3O95398 923 aa13.65□□□□□ -0.22
SOCS4-204ENST00000555846 FAM69CQ0P6D2 419 aa13.65□□□□□ -0.22
SOCS4-204ENST00000555846 ABCA8O94911 1581 aa13.65□□□□□ -0.22
SOCS4-204ENST00000555846 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
SOCS4-204ENST00000555846 ESF1Q9H501 851 aaKnown RBP13.65□□□□□ -0.22
SOCS4-204ENST00000555846 KIAA1107Q9UPP5 1409 aa13.65□□□□□ -0.23
SOCS4-204ENST00000555846 ST20-MTHFSA0A0A6YYL1 179 aa13.63□□□□□ -0.23
SOCS4-204ENST00000555846 KDM6BO15054 1643 aa13.63□□□□□ -0.23
SOCS4-204ENST00000555846 ROCK2O75116 1388 aaKnown RBP13.63□□□□□ -0.23
SOCS4-204ENST00000555846 NUTM2DQ5VT03 806 aaPredicted RBP13.63□□□□□ -0.23
SOCS4-204ENST00000555846 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
SOCS4-204ENST00000555846 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
SOCS4-204ENST00000555846 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
SOCS4-204ENST00000555846 SYCP2Q9BX26 1530 aa13.61□□□□□ -0.23
SOCS4-204ENST00000555846 WASHC2AQ641Q2 1341 aa13.61□□□□□ -0.23
SOCS4-204ENST00000555846 ARID4BQ4LE39 1312 aaPredicted RBP13.61□□□□□ -0.23
SOCS4-204ENST00000555846 WASHC2CQ9Y4E1 1318 aa13.6□□□□□ -0.23
SOCS4-204ENST00000555846 PLEKHH2Q8IVE3 1493 aa13.6□□□□□ -0.23
SOCS4-204ENST00000555846 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
SOCS4-204ENST00000555846 TMC1Q8TDI8 760 aa13.6□□□□□ -0.23
SOCS4-204ENST00000555846 DNMT1P26358 1616 aaKnown RBP13.59□□□□□ -0.23
SOCS4-204ENST00000555846 USP47Q96K76 1375 aa13.59□□□□□ -0.23
SOCS4-204ENST00000555846 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.23
SOCS4-204ENST00000555846 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
SOCS4-204ENST00000555846 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
SOCS4-204ENST00000555846 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
SOCS4-204ENST00000555846 PLCH2O75038 1416 aa13.58□□□□□ -0.24
SOCS4-204ENST00000555846 C11orf95C9JLR9 678 aaPredicted RBP13.58□□□□□ -0.24
SOCS4-204ENST00000555846 TRHP20396 242 aaPredicted RBP13.58□□□□□ -0.24
SOCS4-204ENST00000555846 FKBP8Q14318 412 aa13.55□□□□□ -0.24
SOCS4-204ENST00000555846 FANCAO15360 1455 aa13.55□□□□□ -0.24
SOCS4-204ENST00000555846 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
SOCS4-204ENST00000555846 KIF7Q2M1P5 1343 aa13.55□□□□□ -0.24
SOCS4-204ENST00000555846 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
SOCS4-204ENST00000555846 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
SOCS4-204ENST00000555846 ADGRL1O94910 1474 aa13.54□□□□□ -0.24
SOCS4-204ENST00000555846 IRX6P78412 446 aaPredicted RBP13.54□□□□□ -0.24
SOCS4-204ENST00000555846 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms