RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 KCNH8Q96L42 1107 aa14.62□□□□□ -0.07
HNRNPC-220ENST00000555585 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
HNRNPC-220ENST00000555585 ITGAEP38570 1179 aa14.6□□□□□ -0.07
HNRNPC-220ENST00000555585 ABCC10Q5T3U5 1492 aa14.6□□□□□ -0.07
HNRNPC-220ENST00000555585 MIA2Q96PC5 1412 aa14.59□□□□□ -0.07
HNRNPC-220ENST00000555585 CDC42BPAQ5VT25 1732 aa14.59□□□□□ -0.07
HNRNPC-220ENST00000555585 WDR7Q9Y4E6 1490 aa14.58□□□□□ -0.08
HNRNPC-220ENST00000555585 ASXL2Q76L83 1435 aa14.58□□□□□ -0.08
HNRNPC-220ENST00000555585 GPATCH8Q9UKJ3 1502 aaKnown RBP14.57□□□□□ -0.08
HNRNPC-220ENST00000555585 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
HNRNPC-220ENST00000555585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.56□□□□□ -0.08
HNRNPC-220ENST00000555585 CFDP1Q9UEE9 299 aaPredicted RBP14.56□□□□□ -0.08
HNRNPC-220ENST00000555585 TCOF1Q13428 1488 aaKnown RBP14.56□□□□□ -0.08
HNRNPC-220ENST00000555585 TTC37Q6PGP7 1564 aa14.56□□□□□ -0.08
HNRNPC-220ENST00000555585 ZNF777Q9ULD5 760 aaPredicted RBP14.55□□□□□ -0.08
HNRNPC-220ENST00000555585 MYO5CQ9NQX4 1742 aa14.55□□□□□ -0.08
HNRNPC-220ENST00000555585 PREX2Q70Z35 1606 aa14.54□□□□□ -0.08
HNRNPC-220ENST00000555585 CDC42BPBQ9Y5S2 1711 aa14.53□□□□□ -0.08
HNRNPC-220ENST00000555585 CAMSAP2Q08AD1 1489 aa14.51□□□□□ -0.09
HNRNPC-220ENST00000555585 ZNF644Q9H582 1327 aaPredicted RBP14.51□□□□□ -0.09
HNRNPC-220ENST00000555585 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
HNRNPC-220ENST00000555585 ARHGAP5Q13017 1502 aa14.51□□□□□ -0.09
HNRNPC-220ENST00000555585 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
HNRNPC-220ENST00000555585 ABCA9Q8IUA7 1624 aa14.49□□□□□ -0.09
HNRNPC-220ENST00000555585 PLCH2O75038 1416 aa14.48□□□□□ -0.09
HNRNPC-220ENST00000555585 DNMT1P26358 1616 aaKnown RBP14.47□□□□□ -0.09
HNRNPC-220ENST00000555585 SAMD9LQ8IVG5 1584 aa14.46□□□□□ -0.09
HNRNPC-220ENST00000555585 DAPK1P53355 1430 aa14.45□□□□□ -0.1
HNRNPC-220ENST00000555585 EFCAB2Q5VUJ9 269 aa14.45□□□□□ -0.1
HNRNPC-220ENST00000555585 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
HNRNPC-220ENST00000555585 CHIC2Q9UKJ5 165 aa14.44□□□□□ -0.1
HNRNPC-220ENST00000555585 ABCC5O15440 1437 aa14.43□□□□□ -0.1
HNRNPC-220ENST00000555585 ARAP3Q8WWN8 1544 aa14.43□□□□□ -0.1
HNRNPC-220ENST00000555585 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.1
HNRNPC-220ENST00000555585 PLEKHH2Q8IVE3 1493 aa14.42□□□□□ -0.1
HNRNPC-220ENST00000555585 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
HNRNPC-220ENST00000555585 CD109Q6YHK3 1445 aa14.41□□□□□ -0.1
HNRNPC-220ENST00000555585 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
HNRNPC-220ENST00000555585 RNF39Q9H2S5 420 aa14.41□□□□□ -0.1
HNRNPC-220ENST00000555585 ARHGEF5Q12774 1597 aa14.41□□□□□ -0.1
HNRNPC-220ENST00000555585 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
HNRNPC-220ENST00000555585 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
HNRNPC-220ENST00000555585 ADGBQ8N7X0 1667 aa14.39□□□□□ -0.11
HNRNPC-220ENST00000555585 GLI2P10070 1586 aa14.39□□□□□ -0.11
HNRNPC-220ENST00000555585 FANCAO15360 1455 aa14.39□□□□□ -0.11
HNRNPC-220ENST00000555585 NPM3O75607 178 aaKnown RBP14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 FAM69CQ0P6D2 419 aa14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 RRP7BPQ9NSQ0 103 aa14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 CFAP74Q9C0B2 1584 aa14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 DIP2BQ9P265 1576 aa14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
HNRNPC-220ENST00000555585 RAB3GAP2Q9H2M9 1393 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 ABCC1P33527 1531 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 TSPY4P0CV99 314 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 TSPY10P0CW01 314 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 RSPH4AQ5TD94 716 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 CCER1Q8TC90 406 aaPredicted RBP14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 AKNAQ7Z591 1439 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 KIAA1107Q9UPP5 1409 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 MBD5Q9P267 1494 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 MAP3K4Q9Y6R4 1608 aa14.37□□□□□ -0.11
HNRNPC-220ENST00000555585 GCC2Q8IWJ2 1684 aa14.36□□□□□ -0.11
HNRNPC-220ENST00000555585 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
HNRNPC-220ENST00000555585 ROCK1Q13464 1354 aa14.35□□□□□ -0.11
HNRNPC-220ENST00000555585 SHANK2Q9UPX8 1470 aa14.35□□□□□ -0.11
HNRNPC-220ENST00000555585 NAIPQ13075 1403 aa14.34□□□□□ -0.11
HNRNPC-220ENST00000555585 C9orf84Q5VXU9 1444 aa14.34□□□□□ -0.11
HNRNPC-220ENST00000555585 ARHGEF12Q9NZN5 1544 aa14.34□□□□□ -0.11
HNRNPC-220ENST00000555585 ANKRD30AQ9BXX3 1397 aa14.34□□□□□ -0.11
HNRNPC-220ENST00000555585 ADGRL1O94910 1474 aa14.33□□□□□ -0.12
HNRNPC-220ENST00000555585 TSPOAP1O95153 1857 aa14.33□□□□□ -0.12
HNRNPC-220ENST00000555585 ADGRL2O95490 1459 aa14.32□□□□□ -0.12
HNRNPC-220ENST00000555585 KIF13AQ9H1H9 1805 aa14.32□□□□□ -0.12
HNRNPC-220ENST00000555585 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
HNRNPC-220ENST00000555585 MAST1Q9Y2H9 1570 aa14.31□□□□□ -0.12
HNRNPC-220ENST00000555585 HRCP23327 699 aa14.31□□□□□ -0.12
HNRNPC-220ENST00000555585 TRAPPC8Q9Y2L5 1435 aa14.31□□□□□ -0.12
HNRNPC-220ENST00000555585 NCOA1Q15788 1441 aa14.3□□□□□ -0.12
HNRNPC-220ENST00000555585 NEO1Q92859 1461 aa14.3□□□□□ -0.12
HNRNPC-220ENST00000555585 KDM6BO15054 1643 aa14.28□□□□□ -0.12
HNRNPC-220ENST00000555585 SPAG9O60271 1321 aaKnown RBP14.27□□□□□ -0.12
HNRNPC-220ENST00000555585 AFAP1Q8N556 730 aa14.27□□□□□ -0.13
HNRNPC-220ENST00000555585 MYT1LQ9UL68 1186 aa14.27□□□□□ -0.13
HNRNPC-220ENST00000555585 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-220ENST00000555585 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
HNRNPC-220ENST00000555585 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
HNRNPC-220ENST00000555585 TEX14Q8IWB6 1497 aa14.25□□□□□ -0.13
HNRNPC-220ENST00000555585 KIF15Q9NS87 1388 aa14.25□□□□□ -0.13
HNRNPC-220ENST00000555585 TRIM52Q96A61 297 aa14.25□□□□□ -0.13
HNRNPC-220ENST00000555585 DENND4BO75064 1496 aaPredicted RBP14.24□□□□□ -0.13
HNRNPC-220ENST00000555585 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
HNRNPC-220ENST00000555585 ZEB1P37275 1124 aaPredicted RBP14.23□□□□□ -0.13
HNRNPC-220ENST00000555585 C1QBPQ07021 282 aaKnown RBP14.23□□□□□ -0.13
HNRNPC-220ENST00000555585 RTEL1-TNFRSF6BF6WH68 1400 aa14.23□□□□□ -0.13
HNRNPC-220ENST00000555585 POGZQ7Z3K3 1410 aa14.23□□□□□ -0.13
HNRNPC-220ENST00000555585 ANKRD50Q9ULJ7 1429 aa14.23□□□□□ -0.13
HNRNPC-220ENST00000555585 INO80Q9ULG1 1556 aaPredicted RBP14.22□□□□□ -0.13
HNRNPC-220ENST00000555585 ACIN1Q9UKV3 1341 aaKnown RBP14.22□□□□□ -0.13
HNRNPC-220ENST00000555585 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
HNRNPC-220ENST00000555585 ZFYVE16Q7Z3T8 1539 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms