RNA–Protein interactions for RNA: ENST00000555561.5

SDR39U1-213, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-213ENST00000555561 ABCC2Q92887 1545 aa16.8■□□□□ 0.28
SDR39U1-213ENST00000555561 SHANK2Q9UPX8 1470 aa16.8■□□□□ 0.28
SDR39U1-213ENST00000555561 DAPK1P53355 1430 aa16.8■□□□□ 0.28
SDR39U1-213ENST00000555561 GPATCH8Q9UKJ3 1502 aaKnown RBP16.79■□□□□ 0.28
SDR39U1-213ENST00000555561 ADGRL2O95490 1459 aa16.79■□□□□ 0.28
SDR39U1-213ENST00000555561 ADGBQ8N7X0 1667 aa16.78■□□□□ 0.28
SDR39U1-213ENST00000555561 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
SDR39U1-213ENST00000555561 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.28
SDR39U1-213ENST00000555561 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
SDR39U1-213ENST00000555561 CROCC2H7BZ55 1655 aa16.75■□□□□ 0.27
SDR39U1-213ENST00000555561 RSPH4AQ5TD94 716 aa16.75■□□□□ 0.27
SDR39U1-213ENST00000555561 NPM1P06748 294 aaKnown RBP eCLIP16.74■□□□□ 0.27
SDR39U1-213ENST00000555561 CFDP1Q9UEE9 299 aaPredicted RBP16.74■□□□□ 0.27
SDR39U1-213ENST00000555561 ARHGEF5Q12774 1597 aa16.73■□□□□ 0.27
SDR39U1-213ENST00000555561 PLEKHH2Q8IVE3 1493 aa16.73■□□□□ 0.27
SDR39U1-213ENST00000555561 ABCC5O15440 1437 aa16.72■□□□□ 0.27
SDR39U1-213ENST00000555561 DIEXFQ68CQ4 756 aaKnown RBP16.72■□□□□ 0.27
SDR39U1-213ENST00000555561 CDC42BPAQ5VT25 1732 aa16.72■□□□□ 0.27
SDR39U1-213ENST00000555561 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
SDR39U1-213ENST00000555561 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
SDR39U1-213ENST00000555561 ANKRD30AQ9BXX3 1397 aa16.68■□□□□ 0.26
SDR39U1-213ENST00000555561 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
SDR39U1-213ENST00000555561 FAM69CQ0P6D2 419 aa16.66■□□□□ 0.26
SDR39U1-213ENST00000555561 NCOA1Q15788 1441 aa16.65■□□□□ 0.26
SDR39U1-213ENST00000555561 KIF13AQ9H1H9 1805 aa16.65■□□□□ 0.26
SDR39U1-213ENST00000555561 KIAA1107Q9UPP5 1409 aa16.64■□□□□ 0.25
SDR39U1-213ENST00000555561 MAST1Q9Y2H9 1570 aa16.64■□□□□ 0.25
SDR39U1-213ENST00000555561 TONSLQ96HA7 1378 aa16.63■□□□□ 0.25
SDR39U1-213ENST00000555561 MYO5CQ9NQX4 1742 aa16.62■□□□□ 0.25
SDR39U1-213ENST00000555561 CCDC141Q6ZP82 1450 aa16.61■□□□□ 0.25
SDR39U1-213ENST00000555561 DIP2BQ9P265 1576 aa16.6■□□□□ 0.25
SDR39U1-213ENST00000555561 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
SDR39U1-213ENST00000555561 ARID3CA6NKF2 412 aa16.59■□□□□ 0.25
SDR39U1-213ENST00000555561 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
SDR39U1-213ENST00000555561 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
SDR39U1-213ENST00000555561 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
SDR39U1-213ENST00000555561 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
SDR39U1-213ENST00000555561 CDC42BPBQ9Y5S2 1711 aa16.58■□□□□ 0.24
SDR39U1-213ENST00000555561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.57■□□□□ 0.24
SDR39U1-213ENST00000555561 RRP7BPQ9NSQ0 103 aa16.57■□□□□ 0.24
SDR39U1-213ENST00000555561 MBD5Q9P267 1494 aa16.56■□□□□ 0.24
SDR39U1-213ENST00000555561 ANKRD50Q9ULJ7 1429 aa16.55■□□□□ 0.24
SDR39U1-213ENST00000555561 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-213ENST00000555561 PLXNC1O60486 1568 aa16.55■□□□□ 0.24
SDR39U1-213ENST00000555561 SAMD9LQ8IVG5 1584 aa16.55■□□□□ 0.24
SDR39U1-213ENST00000555561 PLCH2O75038 1416 aa16.54■□□□□ 0.24
SDR39U1-213ENST00000555561 CHIC2Q9UKJ5 165 aa16.54■□□□□ 0.24
SDR39U1-213ENST00000555561 ARHGAP5Q13017 1502 aa16.54■□□□□ 0.24
SDR39U1-213ENST00000555561 TTC37Q6PGP7 1564 aa16.53■□□□□ 0.24
SDR39U1-213ENST00000555561 MPHOSPH9Q99550 1183 aa16.53■□□□□ 0.24
SDR39U1-213ENST00000555561 ZNF644Q9H582 1327 aaPredicted RBP16.52■□□□□ 0.24
SDR39U1-213ENST00000555561 TRIM52Q96A61 297 aa16.52■□□□□ 0.24
SDR39U1-213ENST00000555561 ASXL2Q76L83 1435 aa16.52■□□□□ 0.23
SDR39U1-213ENST00000555561 RPRD2Q5VT52 1461 aaKnown RBP16.51■□□□□ 0.23
SDR39U1-213ENST00000555561 KDM6BO15054 1643 aa16.51■□□□□ 0.23
SDR39U1-213ENST00000555561 WDR7Q9Y4E6 1490 aa16.5■□□□□ 0.23
SDR39U1-213ENST00000555561 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
SDR39U1-213ENST00000555561 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
SDR39U1-213ENST00000555561 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-213ENST00000555561 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
SDR39U1-213ENST00000555561 ZNF777Q9ULD5 760 aaPredicted RBP16.48■□□□□ 0.23
SDR39U1-213ENST00000555561 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
SDR39U1-213ENST00000555561 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
SDR39U1-213ENST00000555561 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
SDR39U1-213ENST00000555561 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
SDR39U1-213ENST00000555561 PZPP20742 1482 aa16.47■□□□□ 0.23
SDR39U1-213ENST00000555561 ABCA9Q8IUA7 1624 aa16.46■□□□□ 0.23
SDR39U1-213ENST00000555561 GLI2P10070 1586 aa16.46■□□□□ 0.23
SDR39U1-213ENST00000555561 ERBINQ96RT1 1412 aa16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 ABCC1P33527 1531 aa16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 SYCP2Q9BX26 1530 aa16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 SLC4A1APQ9BWU0 796 aaKnown RBP16.45■□□□□ 0.22
SDR39U1-213ENST00000555561 UNC13BO14795 1591 aa16.43■□□□□ 0.22
SDR39U1-213ENST00000555561 CFAP74Q9C0B2 1584 aa16.43■□□□□ 0.22
SDR39U1-213ENST00000555561 TSPOAP1O95153 1857 aa16.42■□□□□ 0.22
SDR39U1-213ENST00000555561 ARHGEF12Q9NZN5 1544 aa16.41■□□□□ 0.22
SDR39U1-213ENST00000555561 MAGI2Q86UL8 1455 aa16.39■□□□□ 0.21
SDR39U1-213ENST00000555561 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.21
SDR39U1-213ENST00000555561 HNRNPMP52272 730 aaKnown RBP eCLIP16.36■□□□□ 0.21
SDR39U1-213ENST00000555561 IQGAP3Q86VI3 1631 aa16.36■□□□□ 0.21
SDR39U1-213ENST00000555561 PPRC1Q5VV67 1664 aaKnown RBP16.36■□□□□ 0.21
SDR39U1-213ENST00000555561 NUP155O75694 1391 aa16.36■□□□□ 0.21
SDR39U1-213ENST00000555561 ATP10AO60312 1499 aa16.34■□□□□ 0.21
SDR39U1-213ENST00000555561 FAM135AQ9P2D6 1515 aa16.34■□□□□ 0.21
SDR39U1-213ENST00000555561 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
SDR39U1-213ENST00000555561 EIF2AK4Q9P2K8 1649 aaKnown RBP16.33■□□□□ 0.2
SDR39U1-213ENST00000555561 FANCAO15360 1455 aa16.32■□□□□ 0.2
SDR39U1-213ENST00000555561 UHRF1BP1Q6BDS2 1440 aa16.31■□□□□ 0.2
SDR39U1-213ENST00000555561 INO80Q9ULG1 1556 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-213ENST00000555561 ZFYVE16Q7Z3T8 1539 aa16.3■□□□□ 0.2
SDR39U1-213ENST00000555561 COL17A1Q9UMD9 1497 aaPredicted RBP16.3■□□□□ 0.2
SDR39U1-213ENST00000555561 PKD2Q13563 968 aa16.3■□□□□ 0.2
SDR39U1-213ENST00000555561 KCNH8Q96L42 1107 aa16.3■□□□□ 0.2
SDR39U1-213ENST00000555561 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
SDR39U1-213ENST00000555561 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
SDR39U1-213ENST00000555561 DEPDC5O75140 1603 aa16.27■□□□□ 0.2
SDR39U1-213ENST00000555561 KDM4FA0A1W2PPD8 638 aa16.27■□□□□ 0.2
SDR39U1-213ENST00000555561 MIER1Q8N108 512 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms