RNA–Protein interactions for RNA: ENST00000555503.1

GPHN-208, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-208ENST00000555503 ABCB7O75027 752 aa12.02□□□□□ -0.49
GPHN-208ENST00000555503 ASXL2Q76L83 1435 aa12.02□□□□□ -0.49
GPHN-208ENST00000555503 SSUH2Q9Y2M2 353 aa12.01□□□□□ -0.49
GPHN-208ENST00000555503 GLI2P10070 1586 aa12.01□□□□□ -0.49
GPHN-208ENST00000555503 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
GPHN-208ENST00000555503 C1QBPQ07021 282 aaKnown RBP11.99□□□□□ -0.49
GPHN-208ENST00000555503 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
GPHN-208ENST00000555503 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
GPHN-208ENST00000555503 SPDYE2BA6NHP3 402 aa11.98□□□□□ -0.49
GPHN-208ENST00000555503 SPDYE6P0CI01 402 aa11.98□□□□□ -0.49
GPHN-208ENST00000555503 SPDYE2Q495Y8 402 aa11.98□□□□□ -0.49
GPHN-208ENST00000555503 PLB1Q6P1J6 1458 aa11.97□□□□□ -0.49
GPHN-208ENST00000555503 UACAQ9BZF9 1416 aa11.97□□□□□ -0.49
GPHN-208ENST00000555503 MIER1Q8N108 512 aa11.97□□□□□ -0.49
GPHN-208ENST00000555503 CHGAP10645 457 aaKnown RBP11.96□□□□□ -0.49
GPHN-208ENST00000555503 KDM4FA0A1W2PPD8 638 aa11.95□□□□□ -0.5
GPHN-208ENST00000555503 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
GPHN-208ENST00000555503 EPRSP07814 1512 aaKnown RBP11.95□□□□□ -0.5
GPHN-208ENST00000555503 KDM5BQ9UGL1 1544 aa11.95□□□□□ -0.5
GPHN-208ENST00000555503 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
GPHN-208ENST00000555503 ADGRL1O94910 1474 aa11.92□□□□□ -0.5
GPHN-208ENST00000555503 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
GPHN-208ENST00000555503 COL17A1Q9UMD9 1497 aaPredicted RBP11.9□□□□□ -0.5
GPHN-208ENST00000555503 ABCA8O94911 1581 aa11.9□□□□□ -0.5
GPHN-208ENST00000555503 KIF21BO75037 1637 aa11.89□□□□□ -0.51
GPHN-208ENST00000555503 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
GPHN-208ENST00000555503 ZBTB47Q9UFB7 747 aaPredicted RBP11.89□□□□□ -0.51
GPHN-208ENST00000555503 TEX14Q8IWB6 1497 aa11.89□□□□□ -0.51
GPHN-208ENST00000555503 WDR7Q9Y4E6 1490 aa11.89□□□□□ -0.51
GPHN-208ENST00000555503 NBR1Q14596 966 aa11.88□□□□□ -0.51
GPHN-208ENST00000555503 GOLGA3Q08378 1498 aa11.86□□□□□ -0.51
GPHN-208ENST00000555503 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
GPHN-208ENST00000555503 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
GPHN-208ENST00000555503 ARID3CA6NKF2 412 aa11.82□□□□□ -0.52
GPHN-208ENST00000555503 KCNH8Q96L42 1107 aa11.82□□□□□ -0.52
GPHN-208ENST00000555503 SAMD9Q5K651 1589 aa11.82□□□□□ -0.52
GPHN-208ENST00000555503 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
GPHN-208ENST00000555503 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
GPHN-208ENST00000555503 DSG3P32926 999 aa11.81□□□□□ -0.52
GPHN-208ENST00000555503 ABCA9Q8IUA7 1624 aa11.79□□□□□ -0.52
GPHN-208ENST00000555503 CD109Q6YHK3 1445 aa11.79□□□□□ -0.52
GPHN-208ENST00000555503 P3H3Q8IVL6 736 aa11.79□□□□□ -0.52
GPHN-208ENST00000555503 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
GPHN-208ENST00000555503 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
GPHN-208ENST00000555503 ATP10BO94823 1461 aa11.75□□□□□ -0.53
GPHN-208ENST00000555503 RANGAP1P46060 587 aaPredicted RBP11.73□□□□□ -0.53
GPHN-208ENST00000555503 FRMPD1Q5SYB0 1578 aa11.73□□□□□ -0.53
GPHN-208ENST00000555503 RICTORQ6R327 1708 aa11.72□□□□□ -0.53
GPHN-208ENST00000555503 GSE1Q14687 1217 aa11.72□□□□□ -0.53
GPHN-208ENST00000555503 ADAMTSL3P82987 1691 aa11.71□□□□□ -0.53
GPHN-208ENST00000555503 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.53
GPHN-208ENST00000555503 BCORL1Q5H9F3 1711 aa11.71□□□□□ -0.54
GPHN-208ENST00000555503 ARAP3Q8WWN8 1544 aa11.7□□□□□ -0.54
GPHN-208ENST00000555503 ILDR1Q86SU0 546 aaPredicted RBP11.7□□□□□ -0.54
GPHN-208ENST00000555503 RIMS1Q86UR5 1692 aaKnown RBP11.7□□□□□ -0.54
GPHN-208ENST00000555503 MADDQ8WXG6 1647 aa11.7□□□□□ -0.54
GPHN-208ENST00000555503 NUP153P49790 1475 aaKnown RBP11.69□□□□□ -0.54
GPHN-208ENST00000555503 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
GPHN-208ENST00000555503 TTC37Q6PGP7 1564 aa11.68□□□□□ -0.54
GPHN-208ENST00000555503 CFAP74Q9C0B2 1584 aa11.67□□□□□ -0.54
GPHN-208ENST00000555503 SIGLEC1Q9BZZ2 1709 aa11.67□□□□□ -0.54
GPHN-208ENST00000555503 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
GPHN-208ENST00000555503 TIMELESSQ9UNS1 1208 aa11.67□□□□□ -0.54
GPHN-208ENST00000555503 LRRIQ1Q96JM4 1722 aa11.66□□□□□ -0.54
GPHN-208ENST00000555503 FAM9AQ8IZU1 332 aaPredicted RBP11.66□□□□□ -0.54
GPHN-208ENST00000555503 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
GPHN-208ENST00000555503 RIOK3O14730 519 aaKnown RBP11.65□□□□□ -0.54
GPHN-208ENST00000555503 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.55
GPHN-208ENST00000555503 FER1L4A9Z1Z3 1794 aa11.64□□□□□ -0.55
GPHN-208ENST00000555503 RAPGEF3O95398 923 aa11.64□□□□□ -0.55
GPHN-208ENST00000555503 NUBP1P53384 320 aa11.64□□□□□ -0.55
GPHN-208ENST00000555503 NEO1Q92859 1461 aa11.63□□□□□ -0.55
GPHN-208ENST00000555503 EFCAB5A4FU69 1503 aa11.63□□□□□ -0.55
GPHN-208ENST00000555503 CDK13Q14004 1512 aaKnown RBP11.63□□□□□ -0.55
GPHN-208ENST00000555503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.63□□□□□ -0.55
GPHN-208ENST00000555503 PTPRMP28827 1452 aa11.62□□□□□ -0.55
GPHN-208ENST00000555503 EEA1Q15075 1411 aa11.61□□□□□ -0.55
GPHN-208ENST00000555503 TULP1O00294 542 aaPredicted RBP11.61□□□□□ -0.55
GPHN-208ENST00000555503 GTF3C3Q9Y5Q9 886 aa11.6□□□□□ -0.55
GPHN-208ENST00000555503 FANCAO15360 1455 aa11.59□□□□□ -0.55
GPHN-208ENST00000555503 KIF14Q15058 1648 aa11.59□□□□□ -0.55
GPHN-208ENST00000555503 HECW1Q76N89 1606 aa11.59□□□□□ -0.55
GPHN-208ENST00000555503 PHLDB1Q86UU1 1377 aa11.58□□□□□ -0.56
GPHN-208ENST00000555503 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.56
GPHN-208ENST00000555503 ARID4BQ4LE39 1312 aaPredicted RBP11.58□□□□□ -0.56
GPHN-208ENST00000555503 DENND4BO75064 1496 aaPredicted RBP11.57□□□□□ -0.56
GPHN-208ENST00000555503 ZMYM4Q5VZL5 1548 aa11.56□□□□□ -0.56
GPHN-208ENST00000555503 ZFYVE16Q7Z3T8 1539 aa11.56□□□□□ -0.56
GPHN-208ENST00000555503 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
GPHN-208ENST00000555503 AKNAQ7Z591 1439 aa11.56□□□□□ -0.56
GPHN-208ENST00000555503 CDC42BPBQ9Y5S2 1711 aa11.55□□□□□ -0.56
GPHN-208ENST00000555503 STK25O00506 426 aa11.55□□□□□ -0.56
GPHN-208ENST00000555503 DCAF8Q5TAQ9 597 aa11.55□□□□□ -0.56
GPHN-208ENST00000555503 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
GPHN-208ENST00000555503 ERICH6Q7L0X2 663 aa11.54□□□□□ -0.56
GPHN-208ENST00000555503 LMTK3Q96Q04 1460 aa11.53□□□□□ -0.56
GPHN-208ENST00000555503 SGIP1Q9BQI5 828 aa11.53□□□□□ -0.56
GPHN-208ENST00000555503 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.56
GPHN-208ENST00000555503 PREX1Q8TCU6 1659 aa11.52□□□□□ -0.57
GPHN-208ENST00000555503 TMEM132AQ24JP5 1023 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms