RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 FAM50AQ14320 339 aaKnown RBP16.8■□□□□ 0.28
XRCC3-213ENST00000555451 GPATCH8Q9UKJ3 1502 aaKnown RBP16.8■□□□□ 0.28
XRCC3-213ENST00000555451 CDC42BPAQ5VT25 1732 aa16.79■□□□□ 0.28
XRCC3-213ENST00000555451 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
XRCC3-213ENST00000555451 ABCA9Q8IUA7 1624 aa16.78■□□□□ 0.28
XRCC3-213ENST00000555451 PREX2Q70Z35 1606 aa16.76■□□□□ 0.27
XRCC3-213ENST00000555451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.75■□□□□ 0.27
XRCC3-213ENST00000555451 MYO5CQ9NQX4 1742 aa16.74■□□□□ 0.27
XRCC3-213ENST00000555451 TTC37Q6PGP7 1564 aa16.74■□□□□ 0.27
XRCC3-213ENST00000555451 KDM6BO15054 1643 aa16.74■□□□□ 0.27
XRCC3-213ENST00000555451 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
XRCC3-213ENST00000555451 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
XRCC3-213ENST00000555451 CAMSAP2Q08AD1 1489 aa16.72■□□□□ 0.27
XRCC3-213ENST00000555451 CDC42BPBQ9Y5S2 1711 aa16.71■□□□□ 0.27
XRCC3-213ENST00000555451 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
XRCC3-213ENST00000555451 COL17A1Q9UMD9 1497 aaPredicted RBP16.7■□□□□ 0.26
XRCC3-213ENST00000555451 ITGAEP38570 1179 aa16.7■□□□□ 0.26
XRCC3-213ENST00000555451 ARAP3Q8WWN8 1544 aa16.68■□□□□ 0.26
XRCC3-213ENST00000555451 DAPK1P53355 1430 aa16.67■□□□□ 0.26
XRCC3-213ENST00000555451 ARHGAP5Q13017 1502 aa16.66■□□□□ 0.26
XRCC3-213ENST00000555451 NEO1Q92859 1461 aa16.66■□□□□ 0.26
XRCC3-213ENST00000555451 PLCH2O75038 1416 aa16.65■□□□□ 0.26
XRCC3-213ENST00000555451 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
XRCC3-213ENST00000555451 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
XRCC3-213ENST00000555451 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
XRCC3-213ENST00000555451 SAMD9LQ8IVG5 1584 aa16.64■□□□□ 0.25
XRCC3-213ENST00000555451 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
XRCC3-213ENST00000555451 ARHGEF5Q12774 1597 aa16.64■□□□□ 0.25
XRCC3-213ENST00000555451 SETD5Q9C0A6 1442 aa16.63■□□□□ 0.25
XRCC3-213ENST00000555451 PLEKHH2Q8IVE3 1493 aa16.63■□□□□ 0.25
XRCC3-213ENST00000555451 ZNF777Q9ULD5 760 aaPredicted RBP16.63■□□□□ 0.25
XRCC3-213ENST00000555451 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
XRCC3-213ENST00000555451 ABCC5O15440 1437 aa16.62■□□□□ 0.25
XRCC3-213ENST00000555451 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
XRCC3-213ENST00000555451 ADGBQ8N7X0 1667 aa16.61■□□□□ 0.25
XRCC3-213ENST00000555451 FANCAO15360 1455 aa16.61■□□□□ 0.25
XRCC3-213ENST00000555451 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
XRCC3-213ENST00000555451 ROCK1Q13464 1354 aa16.6■□□□□ 0.25
XRCC3-213ENST00000555451 HRCP23327 699 aa16.59■□□□□ 0.25
XRCC3-213ENST00000555451 EFCAB2Q5VUJ9 269 aa16.59■□□□□ 0.25
XRCC3-213ENST00000555451 RAB3GAP2Q9H2M9 1393 aa16.59■□□□□ 0.25
XRCC3-213ENST00000555451 KIAA1107Q9UPP5 1409 aa16.59■□□□□ 0.25
XRCC3-213ENST00000555451 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
XRCC3-213ENST00000555451 RSPH4AQ5TD94 716 aa16.58■□□□□ 0.24
XRCC3-213ENST00000555451 SYCP2Q9BX26 1530 aa16.57■□□□□ 0.24
XRCC3-213ENST00000555451 ADGRL2O95490 1459 aa16.57■□□□□ 0.24
XRCC3-213ENST00000555451 CCDC141Q6ZP82 1450 aa16.57■□□□□ 0.24
XRCC3-213ENST00000555451 MBD5Q9P267 1494 aa16.57■□□□□ 0.24
XRCC3-213ENST00000555451 NAIPQ13075 1403 aa16.57■□□□□ 0.24
XRCC3-213ENST00000555451 CCER1Q8TC90 406 aaPredicted RBP16.57■□□□□ 0.24
XRCC3-213ENST00000555451 ABCC1P33527 1531 aa16.56■□□□□ 0.24
XRCC3-213ENST00000555451 ZEB1P37275 1124 aaPredicted RBP16.55■□□□□ 0.24
XRCC3-213ENST00000555451 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
XRCC3-213ENST00000555451 MAST1Q9Y2H9 1570 aa16.54■□□□□ 0.24
XRCC3-213ENST00000555451 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
XRCC3-213ENST00000555451 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
XRCC3-213ENST00000555451 DENND4BO75064 1496 aaPredicted RBP16.53■□□□□ 0.24
XRCC3-213ENST00000555451 C9orf84Q5VXU9 1444 aa16.53■□□□□ 0.24
XRCC3-213ENST00000555451 ANKRD30AQ9BXX3 1397 aa16.51■□□□□ 0.23
XRCC3-213ENST00000555451 FRMPD1Q5SYB0 1578 aa16.51■□□□□ 0.23
XRCC3-213ENST00000555451 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
XRCC3-213ENST00000555451 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
XRCC3-213ENST00000555451 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 HNRNPMP52272 730 aaKnown RBP eCLIP16.5■□□□□ 0.23
XRCC3-213ENST00000555451 RRP7BPQ9NSQ0 103 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 NCOA1Q15788 1441 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 SCAPERQ9BY12 1400 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 ARHGEF12Q9NZN5 1544 aa16.5■□□□□ 0.23
XRCC3-213ENST00000555451 CLSPNQ9HAW4 1339 aa16.48■□□□□ 0.23
XRCC3-213ENST00000555451 RICTORQ6R327 1708 aa16.48■□□□□ 0.23
XRCC3-213ENST00000555451 PLXNC1O60486 1568 aa16.47■□□□□ 0.23
XRCC3-213ENST00000555451 POGZQ7Z3K3 1410 aa16.46■□□□□ 0.23
XRCC3-213ENST00000555451 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
XRCC3-213ENST00000555451 TRAPPC8Q9Y2L5 1435 aa16.44■□□□□ 0.22
XRCC3-213ENST00000555451 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
XRCC3-213ENST00000555451 RTEL1-TNFRSF6BF6WH68 1400 aa16.43■□□□□ 0.22
XRCC3-213ENST00000555451 ZNF518AQ6AHZ1 1483 aa16.42■□□□□ 0.22
XRCC3-213ENST00000555451 KIF15Q9NS87 1388 aa16.41■□□□□ 0.22
XRCC3-213ENST00000555451 ANKRD50Q9ULJ7 1429 aa16.41■□□□□ 0.22
XRCC3-213ENST00000555451 INO80Q9ULG1 1556 aaPredicted RBP16.4■□□□□ 0.22
XRCC3-213ENST00000555451 AFAP1Q8N556 730 aa16.4■□□□□ 0.22
XRCC3-213ENST00000555451 ZFYVE16Q7Z3T8 1539 aa16.4■□□□□ 0.22
XRCC3-213ENST00000555451 KDM5CP41229 1560 aa16.39■□□□□ 0.21
XRCC3-213ENST00000555451 ARHGEF40Q8TER5 1519 aa16.39■□□□□ 0.21
XRCC3-213ENST00000555451 DUOX2Q9NRD8 1548 aa16.38■□□□□ 0.21
XRCC3-213ENST00000555451 YEATS2Q9ULM3 1422 aa16.37■□□□□ 0.21
XRCC3-213ENST00000555451 ATP7AQ04656 1500 aa16.37■□□□□ 0.21
XRCC3-213ENST00000555451 HECW2Q9P2P5 1572 aa16.37■□□□□ 0.21
XRCC3-213ENST00000555451 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
XRCC3-213ENST00000555451 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
XRCC3-213ENST00000555451 ERBINQ96RT1 1412 aa16.35■□□□□ 0.21
XRCC3-213ENST00000555451 TRIM52Q96A61 297 aa16.34■□□□□ 0.21
XRCC3-213ENST00000555451 ATP10AO60312 1499 aa16.33■□□□□ 0.2
XRCC3-213ENST00000555451 KDM5DQ9BY66 1539 aa16.33■□□□□ 0.2
XRCC3-213ENST00000555451 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
XRCC3-213ENST00000555451 UNC13BO14795 1591 aa16.31■□□□□ 0.2
XRCC3-213ENST00000555451 EIF2AK4Q9P2K8 1649 aaKnown RBP16.29■□□□□ 0.2
XRCC3-213ENST00000555451 PZPP20742 1482 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms