RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 DENND4BO75064 1496 aaPredicted RBP19.73■□□□□ 0.75
TRAPPC6B-205ENST00000555269 SCAPERQ9BY12 1400 aa19.72■□□□□ 0.75
TRAPPC6B-205ENST00000555269 MTUS2Q5JR59 1369 aa19.7■□□□□ 0.74
TRAPPC6B-205ENST00000555269 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
TRAPPC6B-205ENST00000555269 ZNF777Q9ULD5 760 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC6B-205ENST00000555269 VPS8Q8N3P4 1428 aa19.68■□□□□ 0.74
TRAPPC6B-205ENST00000555269 ADGRL1O94910 1474 aa19.67■□□□□ 0.74
TRAPPC6B-205ENST00000555269 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
TRAPPC6B-205ENST00000555269 FRMPD1Q5SYB0 1578 aa19.65■□□□□ 0.74
TRAPPC6B-205ENST00000555269 MYO5CQ9NQX4 1742 aa19.63■□□□□ 0.73
TRAPPC6B-205ENST00000555269 GPATCH8Q9UKJ3 1502 aaKnown RBP19.63■□□□□ 0.73
TRAPPC6B-205ENST00000555269 ARID4BQ4LE39 1312 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC6B-205ENST00000555269 KANK4Q5T7N3 995 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC6B-205ENST00000555269 CFDP1Q9UEE9 299 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC6B-205ENST00000555269 CFAP74Q9C0B2 1584 aa19.62■□□□□ 0.73
TRAPPC6B-205ENST00000555269 CCNB3Q8WWL7 1395 aa19.62■□□□□ 0.73
TRAPPC6B-205ENST00000555269 HNRNPMP52272 730 aaKnown RBP eCLIP19.61■□□□□ 0.73
TRAPPC6B-205ENST00000555269 YEATS2Q9ULM3 1422 aa19.6■□□□□ 0.73
TRAPPC6B-205ENST00000555269 CDC42BPBQ9Y5S2 1711 aa19.6■□□□□ 0.73
TRAPPC6B-205ENST00000555269 MYT1LQ9UL68 1186 aa19.6■□□□□ 0.73
TRAPPC6B-205ENST00000555269 POGZQ7Z3K3 1410 aa19.59■□□□□ 0.73
TRAPPC6B-205ENST00000555269 ZNF644Q9H582 1327 aaPredicted RBP19.59■□□□□ 0.73
TRAPPC6B-205ENST00000555269 ARHGEF12Q9NZN5 1544 aa19.59■□□□□ 0.73
TRAPPC6B-205ENST00000555269 RICTORQ6R327 1708 aa19.59■□□□□ 0.73
TRAPPC6B-205ENST00000555269 TRAPPC8Q9Y2L5 1435 aa19.58■□□□□ 0.72
TRAPPC6B-205ENST00000555269 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
TRAPPC6B-205ENST00000555269 CDC42BPAQ5VT25 1732 aa19.54■□□□□ 0.72
TRAPPC6B-205ENST00000555269 APLP2Q06481 763 aa19.54■□□□□ 0.72
TRAPPC6B-205ENST00000555269 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
TRAPPC6B-205ENST00000555269 EHBP1L1Q8N3D4 1523 aa19.53■□□□□ 0.72
TRAPPC6B-205ENST00000555269 MLECQ14165 292 aa19.53■□□□□ 0.72
TRAPPC6B-205ENST00000555269 ZNF518AQ6AHZ1 1483 aa19.52■□□□□ 0.72
TRAPPC6B-205ENST00000555269 LRRC9Q6ZRR7 1453 aa19.52■□□□□ 0.72
TRAPPC6B-205ENST00000555269 MAGI2Q86UL8 1455 aa19.52■□□□□ 0.72
TRAPPC6B-205ENST00000555269 ZMYM4Q5VZL5 1548 aa19.51■□□□□ 0.71
TRAPPC6B-205ENST00000555269 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
TRAPPC6B-205ENST00000555269 NCOA2Q15596 1464 aa19.51■□□□□ 0.71
TRAPPC6B-205ENST00000555269 ATP10AO60312 1499 aa19.49■□□□□ 0.71
TRAPPC6B-205ENST00000555269 ABCC1P33527 1531 aa19.49■□□□□ 0.71
TRAPPC6B-205ENST00000555269 SAMD9LQ8IVG5 1584 aa19.48■□□□□ 0.71
TRAPPC6B-205ENST00000555269 ARHGEF40Q8TER5 1519 aa19.47■□□□□ 0.71
TRAPPC6B-205ENST00000555269 SPAG9O60271 1321 aaKnown RBP19.47■□□□□ 0.71
TRAPPC6B-205ENST00000555269 MAP3K1Q13233 1512 aa19.46■□□□□ 0.71
TRAPPC6B-205ENST00000555269 KIAA1107Q9UPP5 1409 aa19.46■□□□□ 0.71
TRAPPC6B-205ENST00000555269 MLH3Q9UHC1 1453 aa19.45■□□□□ 0.7
TRAPPC6B-205ENST00000555269 KDM5CP41229 1560 aa19.44■□□□□ 0.7
TRAPPC6B-205ENST00000555269 SYCP2Q9BX26 1530 aa19.44■□□□□ 0.7
TRAPPC6B-205ENST00000555269 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
TRAPPC6B-205ENST00000555269 ITSN2Q9NZM3 1697 aa19.42■□□□□ 0.7
TRAPPC6B-205ENST00000555269 SIGLEC1Q9BZZ2 1709 aa19.42■□□□□ 0.7
TRAPPC6B-205ENST00000555269 C9orf84Q5VXU9 1444 aa19.42■□□□□ 0.7
TRAPPC6B-205ENST00000555269 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
TRAPPC6B-205ENST00000555269 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
TRAPPC6B-205ENST00000555269 ADAMTSL3P82987 1691 aa19.4■□□□□ 0.7
TRAPPC6B-205ENST00000555269 BCORL1Q5H9F3 1711 aa19.38■□□□□ 0.69
TRAPPC6B-205ENST00000555269 HECW2Q9P2P5 1572 aa19.38■□□□□ 0.69
TRAPPC6B-205ENST00000555269 DIP2CQ9Y2E4 1556 aa19.36■□□□□ 0.69
TRAPPC6B-205ENST00000555269 PTPRMP28827 1452 aa19.36■□□□□ 0.69
TRAPPC6B-205ENST00000555269 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
TRAPPC6B-205ENST00000555269 KIDINS220Q9ULH0 1771 aa19.35■□□□□ 0.69
TRAPPC6B-205ENST00000555269 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
TRAPPC6B-205ENST00000555269 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
TRAPPC6B-205ENST00000555269 ABCA6Q8N139 1617 aa19.34■□□□□ 0.69
TRAPPC6B-205ENST00000555269 CEBPAP49715 358 aaPredicted RBP19.34■□□□□ 0.69
TRAPPC6B-205ENST00000555269 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
TRAPPC6B-205ENST00000555269 MADDQ8WXG6 1647 aa19.33■□□□□ 0.69
TRAPPC6B-205ENST00000555269 TSPY4P0CV99 314 aa19.33■□□□□ 0.68
TRAPPC6B-205ENST00000555269 TSPY10P0CW01 314 aa19.33■□□□□ 0.68
TRAPPC6B-205ENST00000555269 ATP7AQ04656 1500 aa19.3■□□□□ 0.68
TRAPPC6B-205ENST00000555269 MIA2Q96PC5 1412 aa19.29■□□□□ 0.68
TRAPPC6B-205ENST00000555269 RTEL1-TNFRSF6BF6WH68 1400 aa19.28■□□□□ 0.68
TRAPPC6B-205ENST00000555269 GGT6Q6P531 493 aa19.28■□□□□ 0.68
TRAPPC6B-205ENST00000555269 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
TRAPPC6B-205ENST00000555269 A2MP01023 1474 aa19.27■□□□□ 0.67
TRAPPC6B-205ENST00000555269 ESF1Q9H501 851 aaKnown RBP19.26■□□□□ 0.67
TRAPPC6B-205ENST00000555269 REREQ9P2R6 1566 aa19.26■□□□□ 0.67
TRAPPC6B-205ENST00000555269 RIMS1Q86UR5 1692 aaKnown RBP19.26■□□□□ 0.67
TRAPPC6B-205ENST00000555269 AGLP35573 1532 aa19.25■□□□□ 0.67
TRAPPC6B-205ENST00000555269 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
TRAPPC6B-205ENST00000555269 DHX29Q7Z478 1369 aaKnown RBP19.24■□□□□ 0.67
TRAPPC6B-205ENST00000555269 KIF3BO15066 747 aa19.23■□□□□ 0.67
TRAPPC6B-205ENST00000555269 FGD6Q6ZV73 1430 aa19.22■□□□□ 0.67
TRAPPC6B-205ENST00000555269 FAM50AQ14320 339 aaKnown RBP19.21■□□□□ 0.67
TRAPPC6B-205ENST00000555269 CHIC2Q9UKJ5 165 aa19.21■□□□□ 0.67
TRAPPC6B-205ENST00000555269 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
TRAPPC6B-205ENST00000555269 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
TRAPPC6B-205ENST00000555269 ABCC5O15440 1437 aa19.19■□□□□ 0.66
TRAPPC6B-205ENST00000555269 RRP7BPQ9NSQ0 103 aa19.19■□□□□ 0.66
TRAPPC6B-205ENST00000555269 HSPA2P54652 639 aa19.18■□□□□ 0.66
TRAPPC6B-205ENST00000555269 FER1L4A9Z1Z3 1794 aa19.18■□□□□ 0.66
TRAPPC6B-205ENST00000555269 MAPK8IP2Q13387 824 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC6B-205ENST00000555269 PTPN23Q9H3S7 1636 aa19.17■□□□□ 0.66
TRAPPC6B-205ENST00000555269 ZMYM3Q14202 1370 aa19.16■□□□□ 0.66
TRAPPC6B-205ENST00000555269 PLXNC1O60486 1568 aa19.15■□□□□ 0.66
TRAPPC6B-205ENST00000555269 TCOF1Q13428 1488 aaKnown RBP19.15■□□□□ 0.66
TRAPPC6B-205ENST00000555269 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
TRAPPC6B-205ENST00000555269 ADGBQ8N7X0 1667 aa19.13■□□□□ 0.65
TRAPPC6B-205ENST00000555269 DAPK1P53355 1430 aa19.12■□□□□ 0.65
TRAPPC6B-205ENST00000555269 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
TRAPPC6B-205ENST00000555269 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms