RNA–Protein interactions for RNA: ENST00000555233.5

PRKCH-214, Transcript of protein kinase C eta, humanhuman

TSL 2

Gene PRKCH, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-214ENST00000555233 CDC42BPAQ5VT25 1732 aa10.05□□□□□ -0.8
PRKCH-214ENST00000555233 MAP3K1Q13233 1512 aa10.04□□□□□ -0.8
PRKCH-214ENST00000555233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.03□□□□□ -0.8
PRKCH-214ENST00000555233 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
PRKCH-214ENST00000555233 CDC42BPBQ9Y5S2 1711 aa10.03□□□□□ -0.8
PRKCH-214ENST00000555233 CCDC18Q5T9S5 1454 aa10.02□□□□□ -0.81
PRKCH-214ENST00000555233 TSPOAP1O95153 1857 aa10.01□□□□□ -0.81
PRKCH-214ENST00000555233 PREX2Q70Z35 1606 aa10□□□□□ -0.81
PRKCH-214ENST00000555233 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
PRKCH-214ENST00000555233 TROQ12816 1431 aaPredicted RBP9.99□□□□□ -0.81
PRKCH-214ENST00000555233 EHBP1L1Q8N3D4 1523 aa9.98□□□□□ -0.81
PRKCH-214ENST00000555233 MYCNP04198 464 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-214ENST00000555233 TTBK1Q5TCY1 1321 aaPredicted RBP9.98□□□□□ -0.81
PRKCH-214ENST00000555233 FRMPD1Q5SYB0 1578 aa9.97□□□□□ -0.81
PRKCH-214ENST00000555233 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
PRKCH-214ENST00000555233 LRRC9Q6ZRR7 1453 aa9.96□□□□□ -0.82
PRKCH-214ENST00000555233 RICTORQ6R327 1708 aa9.95□□□□□ -0.82
PRKCH-214ENST00000555233 SUPT6HQ7KZ85 1726 aaKnown RBP9.95□□□□□ -0.82
PRKCH-214ENST00000555233 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
PRKCH-214ENST00000555233 SLC4A2P04920 1241 aa9.94□□□□□ -0.82
PRKCH-214ENST00000555233 SAMD9LQ8IVG5 1584 aa9.93□□□□□ -0.82
PRKCH-214ENST00000555233 ARID3CA6NKF2 412 aa9.93□□□□□ -0.82
PRKCH-214ENST00000555233 CAPN15O75808 1086 aa9.93□□□□□ -0.82
PRKCH-214ENST00000555233 ITSN2Q9NZM3 1697 aa9.93□□□□□ -0.82
PRKCH-214ENST00000555233 SIGLEC1Q9BZZ2 1709 aa9.91□□□□□ -0.82
PRKCH-214ENST00000555233 GPATCH8Q9UKJ3 1502 aaKnown RBP9.91□□□□□ -0.82
PRKCH-214ENST00000555233 NCOA2Q15596 1464 aa9.91□□□□□ -0.82
PRKCH-214ENST00000555233 KANK4Q5T7N3 995 aaPredicted RBP9.9□□□□□ -0.82
PRKCH-214ENST00000555233 ABCC1P33527 1531 aa9.9□□□□□ -0.82
PRKCH-214ENST00000555233 ARHGEF12Q9NZN5 1544 aa9.89□□□□□ -0.83
PRKCH-214ENST00000555233 CHRDL2Q6WN34 429 aa9.89□□□□□ -0.83
PRKCH-214ENST00000555233 PLCB2Q00722 1185 aa9.88□□□□□ -0.83
PRKCH-214ENST00000555233 PLCH2O75038 1416 aa9.88□□□□□ -0.83
PRKCH-214ENST00000555233 CFAP74Q9C0B2 1584 aa9.88□□□□□ -0.83
PRKCH-214ENST00000555233 KDM5CP41229 1560 aa9.87□□□□□ -0.83
PRKCH-214ENST00000555233 CROCC2H7BZ55 1655 aa9.87□□□□□ -0.83
PRKCH-214ENST00000555233 CD109Q6YHK3 1445 aa9.86□□□□□ -0.83
PRKCH-214ENST00000555233 ZMYM4Q5VZL5 1548 aa9.86□□□□□ -0.83
PRKCH-214ENST00000555233 PHLDB1Q86UU1 1377 aa9.86□□□□□ -0.83
PRKCH-214ENST00000555233 NEO1Q92859 1461 aa9.85□□□□□ -0.83
PRKCH-214ENST00000555233 SPINK5Q9NQ38 1064 aaPredicted RBP9.85□□□□□ -0.83
PRKCH-214ENST00000555233 KDM6BO15054 1643 aa9.85□□□□□ -0.83
PRKCH-214ENST00000555233 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-214ENST00000555233 KIDINS220Q9ULH0 1771 aa9.84□□□□□ -0.83
PRKCH-214ENST00000555233 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
PRKCH-214ENST00000555233 FANCAO15360 1455 aa9.84□□□□□ -0.83
PRKCH-214ENST00000555233 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
PRKCH-214ENST00000555233 MBD5Q9P267 1494 aa9.84□□□□□ -0.83
PRKCH-214ENST00000555233 SYCP2Q9BX26 1530 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 PTPN23Q9H3S7 1636 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
PRKCH-214ENST00000555233 MTUS2Q5JR59 1369 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 ADGBQ8N7X0 1667 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 MYOM3Q5VTT5 1437 aa9.82□□□□□ -0.84
PRKCH-214ENST00000555233 CAMSAP2Q08AD1 1489 aa9.81□□□□□ -0.84
PRKCH-214ENST00000555233 PLEKHD1A6NEE1 506 aa9.81□□□□□ -0.84
PRKCH-214ENST00000555233 DNMT1P26358 1616 aaKnown RBP9.81□□□□□ -0.84
PRKCH-214ENST00000555233 ABCA6Q8N139 1617 aa9.81□□□□□ -0.84
PRKCH-214ENST00000555233 ARHGAP5Q13017 1502 aa9.81□□□□□ -0.84
PRKCH-214ENST00000555233 ARHGEF40Q8TER5 1519 aa9.8□□□□□ -0.84
PRKCH-214ENST00000555233 POGZQ7Z3K3 1410 aa9.8□□□□□ -0.84
PRKCH-214ENST00000555233 MAST1Q9Y2H9 1570 aa9.8□□□□□ -0.84
PRKCH-214ENST00000555233 ZFYVE16Q7Z3T8 1539 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-214ENST00000555233 BCANQ96GW7 911 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 KCNH8Q96L42 1107 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 FGD6Q6ZV73 1430 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 AKNAQ7Z591 1439 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 TRAPPC8Q9Y2L5 1435 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 DIP2CQ9Y2E4 1556 aa9.79□□□□□ -0.84
PRKCH-214ENST00000555233 MIA2Q96PC5 1412 aa9.78□□□□□ -0.84
PRKCH-214ENST00000555233 HECW2Q9P2P5 1572 aa9.78□□□□□ -0.84
PRKCH-214ENST00000555233 ADGRL1O94910 1474 aa9.78□□□□□ -0.84
PRKCH-214ENST00000555233 PLXNC1O60486 1568 aa9.77□□□□□ -0.85
PRKCH-214ENST00000555233 KIAA1107Q9UPP5 1409 aa9.77□□□□□ -0.85
PRKCH-214ENST00000555233 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-214ENST00000555233 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
PRKCH-214ENST00000555233 REREQ9P2R6 1566 aa9.76□□□□□ -0.85
PRKCH-214ENST00000555233 RRBP1Q9P2E9 1410 aaKnown RBP9.76□□□□□ -0.85
PRKCH-214ENST00000555233 ZNF644Q9H582 1327 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-214ENST00000555233 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
PRKCH-214ENST00000555233 CDK11AQ9UQ88 783 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-214ENST00000555233 PTPRKQ15262 1439 aa9.74□□□□□ -0.85
PRKCH-214ENST00000555233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-214ENST00000555233 HNRNPUL2Q1KMD3 747 aaKnown RBP9.74□□□□□ -0.85
PRKCH-214ENST00000555233 CCNB3Q8WWL7 1395 aa9.74□□□□□ -0.85
PRKCH-214ENST00000555233 SCAPERQ9BY12 1400 aa9.73□□□□□ -0.85
PRKCH-214ENST00000555233 YEATS2Q9ULM3 1422 aa9.73□□□□□ -0.85
PRKCH-214ENST00000555233 DENND4BO75064 1496 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-214ENST00000555233 MLH3Q9UHC1 1453 aa9.73□□□□□ -0.85
PRKCH-214ENST00000555233 ATP7AQ04656 1500 aa9.73□□□□□ -0.85
PRKCH-214ENST00000555233 TRHP20396 242 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-214ENST00000555233 MROH1Q8NDA8 1641 aa9.73□□□□□ -0.85
PRKCH-214ENST00000555233 ZNF518AQ6AHZ1 1483 aa9.72□□□□□ -0.85
PRKCH-214ENST00000555233 SHANK2Q9UPX8 1470 aa9.72□□□□□ -0.85
PRKCH-214ENST00000555233 ABCC5O15440 1437 aa9.72□□□□□ -0.85
PRKCH-214ENST00000555233 CCDC141Q6ZP82 1450 aa9.72□□□□□ -0.85
PRKCH-214ENST00000555233 PLEKHH2Q8IVE3 1493 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms