RNA–Protein interactions for RNA: ENST00000555034.5

FOXN3-208, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-208ENST00000555034 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
FOXN3-208ENST00000555034 ATP10BO94823 1461 aa12.83□□□□□ -0.36
FOXN3-208ENST00000555034 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
FOXN3-208ENST00000555034 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
FOXN3-208ENST00000555034 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
FOXN3-208ENST00000555034 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
FOXN3-208ENST00000555034 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
FOXN3-208ENST00000555034 NEO1Q92859 1461 aa12.78□□□□□ -0.36
FOXN3-208ENST00000555034 PLEKHD1A6NEE1 506 aa12.78□□□□□ -0.36
FOXN3-208ENST00000555034 EFCAB5A4FU69 1503 aa12.77□□□□□ -0.37
FOXN3-208ENST00000555034 ABCA9Q8IUA7 1624 aa12.77□□□□□ -0.37
FOXN3-208ENST00000555034 RAPGEF6Q8TEU7 1601 aa12.77□□□□□ -0.37
FOXN3-208ENST00000555034 NUP153P49790 1475 aaKnown RBP12.73□□□□□ -0.37
FOXN3-208ENST00000555034 KIF21BO75037 1637 aa12.73□□□□□ -0.37
FOXN3-208ENST00000555034 ARID3CA6NKF2 412 aa12.72□□□□□ -0.37
FOXN3-208ENST00000555034 SLC4A1APQ9BWU0 796 aaKnown RBP12.72□□□□□ -0.37
FOXN3-208ENST00000555034 CDK11AQ9UQ88 783 aaPredicted RBP12.71□□□□□ -0.37
FOXN3-208ENST00000555034 FHOD3Q2V2M9 1422 aa12.7□□□□□ -0.38
FOXN3-208ENST00000555034 FMN1Q68DA7 1419 aa12.7□□□□□ -0.38
FOXN3-208ENST00000555034 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
FOXN3-208ENST00000555034 UBTFP17480 764 aaKnown RBP12.67□□□□□ -0.38
FOXN3-208ENST00000555034 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
FOXN3-208ENST00000555034 DENND4BO75064 1496 aaPredicted RBP12.66□□□□□ -0.38
FOXN3-208ENST00000555034 CFAP74Q9C0B2 1584 aa12.66□□□□□ -0.38
FOXN3-208ENST00000555034 AKNAQ7Z591 1439 aa12.65□□□□□ -0.38
FOXN3-208ENST00000555034 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
FOXN3-208ENST00000555034 FANCAO15360 1455 aa12.64□□□□□ -0.39
FOXN3-208ENST00000555034 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
FOXN3-208ENST00000555034 HECW2Q9P2P5 1572 aa12.62□□□□□ -0.39
FOXN3-208ENST00000555034 PLCH2O75038 1416 aa12.62□□□□□ -0.39
FOXN3-208ENST00000555034 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
FOXN3-208ENST00000555034 PRKAR2AP13861 404 aaKnown RBP12.61□□□□□ -0.39
FOXN3-208ENST00000555034 EFCAB2Q5VUJ9 269 aa12.61□□□□□ -0.39
FOXN3-208ENST00000555034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.61□□□□□ -0.39
FOXN3-208ENST00000555034 PTPRMP28827 1452 aa12.59□□□□□ -0.39
FOXN3-208ENST00000555034 HECW1Q76N89 1606 aa12.59□□□□□ -0.39
FOXN3-208ENST00000555034 ZMYM4Q5VZL5 1548 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 ZBTB22O15209 634 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 CLIP1P30622 1438 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
FOXN3-208ENST00000555034 ADAMTSL3P82987 1691 aa12.57□□□□□ -0.4
FOXN3-208ENST00000555034 ARHGEF40Q8TER5 1519 aa12.57□□□□□ -0.4
FOXN3-208ENST00000555034 FRMPD1Q5SYB0 1578 aa12.57□□□□□ -0.4
FOXN3-208ENST00000555034 ATP1B4Q9UN42 357 aaPredicted RBP12.57□□□□□ -0.4
FOXN3-208ENST00000555034 ARHGAP35Q9NRY4 1499 aa12.57□□□□□ -0.4
FOXN3-208ENST00000555034 SCAPERQ9BY12 1400 aa12.55□□□□□ -0.4
FOXN3-208ENST00000555034 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
FOXN3-208ENST00000555034 BCORL1Q5H9F3 1711 aa12.54□□□□□ -0.4
FOXN3-208ENST00000555034 CDK13Q14004 1512 aaKnown RBP12.54□□□□□ -0.4
FOXN3-208ENST00000555034 ZFYVE16Q7Z3T8 1539 aa12.54□□□□□ -0.4
FOXN3-208ENST00000555034 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
FOXN3-208ENST00000555034 ILDR1Q86SU0 546 aaPredicted RBP12.54□□□□□ -0.4
FOXN3-208ENST00000555034 TTC37Q6PGP7 1564 aa12.54□□□□□ -0.4
FOXN3-208ENST00000555034 RICTORQ6R327 1708 aa12.54□□□□□ -0.4
FOXN3-208ENST00000555034 CLEC11AQ9Y240 323 aa12.53□□□□□ -0.4
FOXN3-208ENST00000555034 CCDC18Q5T9S5 1454 aa12.53□□□□□ -0.4
FOXN3-208ENST00000555034 ZNF518AQ6AHZ1 1483 aa12.52□□□□□ -0.41
FOXN3-208ENST00000555034 KIF14Q15058 1648 aa12.51□□□□□ -0.41
FOXN3-208ENST00000555034 ATP10AO60312 1499 aa12.51□□□□□ -0.41
FOXN3-208ENST00000555034 CASKIN1Q8WXD9 1431 aa12.5□□□□□ -0.41
FOXN3-208ENST00000555034 C9orf84Q5VXU9 1444 aa12.49□□□□□ -0.41
FOXN3-208ENST00000555034 GABBR2O75899 941 aa12.49□□□□□ -0.41
FOXN3-208ENST00000555034 MADDQ8WXG6 1647 aa12.48□□□□□ -0.41
FOXN3-208ENST00000555034 PCF11O94913 1555 aaKnown RBP12.48□□□□□ -0.41
FOXN3-208ENST00000555034 SPDYE1Q8NFV5 336 aaPredicted RBP12.48□□□□□ -0.41
FOXN3-208ENST00000555034 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
FOXN3-208ENST00000555034 MYO5CQ9NQX4 1742 aa12.47□□□□□ -0.41
FOXN3-208ENST00000555034 ARHGAP5Q13017 1502 aa12.47□□□□□ -0.41
FOXN3-208ENST00000555034 LHX8Q68G74 356 aa12.46□□□□□ -0.41
FOXN3-208ENST00000555034 FBXO41Q8TF61 875 aa12.46□□□□□ -0.41
FOXN3-208ENST00000555034 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
FOXN3-208ENST00000555034 LMTK3Q96Q04 1460 aa12.46□□□□□ -0.42
FOXN3-208ENST00000555034 FYCO1Q9BQS8 1478 aa12.45□□□□□ -0.42
FOXN3-208ENST00000555034 MLH3Q9UHC1 1453 aa12.45□□□□□ -0.42
FOXN3-208ENST00000555034 KDM5CP41229 1560 aa12.43□□□□□ -0.42
FOXN3-208ENST00000555034 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
FOXN3-208ENST00000555034 AFAP1Q8N556 730 aa12.43□□□□□ -0.42
FOXN3-208ENST00000555034 MYT1LQ9UL68 1186 aa12.43□□□□□ -0.42
FOXN3-208ENST00000555034 REREQ9P2R6 1566 aa12.43□□□□□ -0.42
FOXN3-208ENST00000555034 ARHGEF12Q9NZN5 1544 aa12.42□□□□□ -0.42
FOXN3-208ENST00000555034 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
FOXN3-208ENST00000555034 MLECQ14165 292 aa12.42□□□□□ -0.42
FOXN3-208ENST00000555034 ESF1Q9H501 851 aaKnown RBP12.42□□□□□ -0.42
FOXN3-208ENST00000555034 RIMS1Q86UR5 1692 aaKnown RBP12.42□□□□□ -0.42
FOXN3-208ENST00000555034 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
FOXN3-208ENST00000555034 AGLP35573 1532 aa12.4□□□□□ -0.42
FOXN3-208ENST00000555034 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
FOXN3-208ENST00000555034 PLEKHH2Q8IVE3 1493 aa12.39□□□□□ -0.43
FOXN3-208ENST00000555034 CNTLNQ9NXG0 1405 aa12.38□□□□□ -0.43
FOXN3-208ENST00000555034 KIAA1107Q9UPP5 1409 aa12.37□□□□□ -0.43
FOXN3-208ENST00000555034 ABCC1P33527 1531 aa12.37□□□□□ -0.43
FOXN3-208ENST00000555034 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
FOXN3-208ENST00000555034 FER1L4A9Z1Z3 1794 aa12.36□□□□□ -0.43
FOXN3-208ENST00000555034 ZNF692Q9BU19 519 aaPredicted RBP12.36□□□□□ -0.43
FOXN3-208ENST00000555034 DIP2CQ9Y2E4 1556 aa12.35□□□□□ -0.43
FOXN3-208ENST00000555034 CFDP1Q9UEE9 299 aaPredicted RBP12.35□□□□□ -0.43
FOXN3-208ENST00000555034 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
FOXN3-208ENST00000555034 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms