RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.27□□□□□ -0.61
PSEN1-211ENST00000554995 EFCAB3Q8N7B9 438 aa11.27□□□□□ -0.61
PSEN1-211ENST00000554995 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
PSEN1-211ENST00000554995 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
PSEN1-211ENST00000554995 NLRP6P59044 892 aa11.24□□□□□ -0.61
PSEN1-211ENST00000554995 SOX12O15370 315 aa11.23□□□□□ -0.61
PSEN1-211ENST00000554995 PHF8Q9UPP1 1060 aa11.23□□□□□ -0.61
PSEN1-211ENST00000554995 MARVELD3Q96A59 401 aa11.22□□□□□ -0.61
PSEN1-211ENST00000554995 ARHGEF1Q92888 912 aaKnown RBP11.21□□□□□ -0.61
PSEN1-211ENST00000554995 GTF3C3Q9Y5Q9 886 aa11.2□□□□□ -0.62
PSEN1-211ENST00000554995 E2F4Q16254 413 aa11.19□□□□□ -0.62
PSEN1-211ENST00000554995 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
PSEN1-211ENST00000554995 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
PSEN1-211ENST00000554995 TULP1O00294 542 aaPredicted RBP11.17□□□□□ -0.62
PSEN1-211ENST00000554995 TMEM132AQ24JP5 1023 aa11.17□□□□□ -0.62
PSEN1-211ENST00000554995 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
PSEN1-211ENST00000554995 SNPHO15079 494 aa11.16□□□□□ -0.62
PSEN1-211ENST00000554995 PLCG2P16885 1265 aa11.13□□□□□ -0.63
PSEN1-211ENST00000554995 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
PSEN1-211ENST00000554995 NCKAP5LQ9HCH0 1330 aa11.12□□□□□ -0.63
PSEN1-211ENST00000554995 SEMA3EO15041 775 aa11.11□□□□□ -0.63
PSEN1-211ENST00000554995 TESPA1A2RU30 521 aaPredicted RBP11.1□□□□□ -0.63
PSEN1-211ENST00000554995 MS4A4AQ96JQ5 239 aa11.1□□□□□ -0.63
PSEN1-211ENST00000554995 TMEM106CQ9BVX2 250 aa11.1□□□□□ -0.63
PSEN1-211ENST00000554995 POTEB3A0JP26 581 aa11.09□□□□□ -0.63
PSEN1-211ENST00000554995 POTEBQ6S5H4 581 aa11.09□□□□□ -0.63
PSEN1-211ENST00000554995 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
PSEN1-211ENST00000554995 LARP6Q9BRS8 491 aaKnown RBP11.08□□□□□ -0.64
PSEN1-211ENST00000554995 PDE4AP27815 886 aa11.07□□□□□ -0.64
PSEN1-211ENST00000554995 EMP3P54852 163 aa11.06□□□□□ -0.64
PSEN1-211ENST00000554995 MFSD10Q14728 455 aa11.06□□□□□ -0.64
PSEN1-211ENST00000554995 CRISPLD2Q9H0B8 497 aa11.05□□□□□ -0.64
PSEN1-211ENST00000554995 BRPF1P55201 1214 aaPredicted RBP11.04□□□□□ -0.64
PSEN1-211ENST00000554995 HS3ST6Q96QI5 342 aa11.04□□□□□ -0.64
PSEN1-211ENST00000554995 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.04□□□□□ -0.64
PSEN1-211ENST00000554995 GOLGA2Q08379 1002 aa11.03□□□□□ -0.64
PSEN1-211ENST00000554995 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
PSEN1-211ENST00000554995 ERICH6Q7L0X2 663 aa11.01□□□□□ -0.65
PSEN1-211ENST00000554995 OCEL1Q9H607 264 aa11□□□□□ -0.65
PSEN1-211ENST00000554995 SLC24A3Q9HC58 644 aa11□□□□□ -0.65
PSEN1-211ENST00000554995 ARIH1Q9Y4X5 557 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-211ENST00000554995 SMYD5Q6GMV2 418 aa10.98□□□□□ -0.65
PSEN1-211ENST00000554995 FAM205CA6NFA0 338 aa10.97□□□□□ -0.65
PSEN1-211ENST00000554995 MKRN3Q13064 507 aaKnown RBP10.97□□□□□ -0.65
PSEN1-211ENST00000554995 CAMK2BQ13554 666 aa10.97□□□□□ -0.65
PSEN1-211ENST00000554995 NEUROD2Q15784 382 aa10.95□□□□□ -0.66
PSEN1-211ENST00000554995 ZMYND10O75800 440 aa10.94□□□□□ -0.66
PSEN1-211ENST00000554995 PPP1R15BQ5SWA1 713 aa10.89□□□□□ -0.67
PSEN1-211ENST00000554995 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
PSEN1-211ENST00000554995 BARGINQ6ZT62 677 aa10.88□□□□□ -0.67
PSEN1-211ENST00000554995 ILDR1Q86SU0 546 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-211ENST00000554995 RNF166Q96A37 237 aaPredicted RBP10.88□□□□□ -0.67
PSEN1-211ENST00000554995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
PSEN1-211ENST00000554995 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-211ENST00000554995 GPHNQ9NQX3 736 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-211ENST00000554995 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
PSEN1-211ENST00000554995 L3MBTL3Q96JM7 780 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-211ENST00000554995 GPIHBP1Q8IV16 184 aa10.83□□□□□ -0.68
PSEN1-211ENST00000554995 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
PSEN1-211ENST00000554995 C3orf67Q6ZVT6 689 aa10.82□□□□□ -0.68
PSEN1-211ENST00000554995 DPYSL4O14531 572 aa10.81□□□□□ -0.68
PSEN1-211ENST00000554995 EMILIN3Q9NT22 766 aa10.81□□□□□ -0.68
PSEN1-211ENST00000554995 DSG2Q14126 1118 aa10.79□□□□□ -0.68
PSEN1-211ENST00000554995 DPY19L2Q6NUT2 758 aa10.79□□□□□ -0.68
PSEN1-211ENST00000554995 AK7Q96M32 723 aa10.79□□□□□ -0.68
PSEN1-211ENST00000554995 SPDYE16A6NNV3 312 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-211ENST00000554995 PDIA6Q15084 440 aa10.77□□□□□ -0.69
PSEN1-211ENST00000554995 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
PSEN1-211ENST00000554995 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
PSEN1-211ENST00000554995 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
PSEN1-211ENST00000554995 FOXK1P85037 733 aa10.74□□□□□ -0.69
PSEN1-211ENST00000554995 MYT1LQ9UL68 1186 aa10.74□□□□□ -0.69
PSEN1-211ENST00000554995 GPBP1L1Q9HC44 474 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-211ENST00000554995 HOXB3P14651 431 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-211ENST00000554995 ARXQ96QS3 562 aa10.72□□□□□ -0.69
PSEN1-211ENST00000554995 G3V3G9 751 aa10.71□□□□□ -0.69
PSEN1-211ENST00000554995 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-211ENST00000554995 TRIM66O15016 1216 aa10.69□□□□□ -0.7
PSEN1-211ENST00000554995 PLPP6Q8IY26 295 aa10.69□□□□□ -0.7
PSEN1-211ENST00000554995 C2orf72A6NCS6 295 aa10.67□□□□□ -0.7
PSEN1-211ENST00000554995 GPR37O15354 613 aa10.67□□□□□ -0.7
PSEN1-211ENST00000554995 PDE4DQ08499 809 aa10.67□□□□□ -0.7
PSEN1-211ENST00000554995 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
PSEN1-211ENST00000554995 BOLA1Q9Y3E2 137 aa10.66□□□□□ -0.7
PSEN1-211ENST00000554995 KIF3CO14782 793 aa10.65□□□□□ -0.7
PSEN1-211ENST00000554995 IL27Q8NEV9 243 aa10.65□□□□□ -0.7
PSEN1-211ENST00000554995 DAXXQ9UER7 740 aaPredicted RBP10.65□□□□□ -0.7
PSEN1-211ENST00000554995 ERBB3P21860 1342 aa10.64□□□□□ -0.71
PSEN1-211ENST00000554995 GRXCR2A6NFK2 248 aa10.63□□□□□ -0.71
PSEN1-211ENST00000554995 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
PSEN1-211ENST00000554995 PTGER2P43116 358 aa10.6□□□□□ -0.71
PSEN1-211ENST00000554995 NUTM2FA1L443 756 aa10.59□□□□□ -0.71
PSEN1-211ENST00000554995 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.71
PSEN1-211ENST00000554995 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
PSEN1-211ENST00000554995 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.72
PSEN1-211ENST00000554995 OSBPP22059 807 aa10.57□□□□□ -0.72
PSEN1-211ENST00000554995 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
PSEN1-211ENST00000554995 VARS2Q5ST30 1063 aaKnown RBP10.57□□□□□ -0.72
PSEN1-211ENST00000554995 HOMEZQ8IX15 550 aa10.56□□□□□ -0.72
PSEN1-211ENST00000554995 ZNF710Q8N1W2 664 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms