RNA–Protein interactions for RNA: ENST00000554986.2

SIX1-203, Transcript of SIX homeobox 1, humanhuman

TSL 3 BASIC

Gene SIX1, Length 1,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-203ENST00000554986 TSPOAP1O95153 1857 aa19.64■□□□□ 0.73
SIX1-203ENST00000554986 SUPT6HQ7KZ85 1726 aaKnown RBP19.64■□□□□ 0.73
SIX1-203ENST00000554986 CLSPNQ9HAW4 1339 aa19.63■□□□□ 0.73
SIX1-203ENST00000554986 PPRC1Q5VV67 1664 aaKnown RBP19.62■□□□□ 0.73
SIX1-203ENST00000554986 CD109Q6YHK3 1445 aa19.62■□□□□ 0.73
SIX1-203ENST00000554986 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
SIX1-203ENST00000554986 CDC42BPAQ5VT25 1732 aa19.59■□□□□ 0.73
SIX1-203ENST00000554986 MYO5CQ9NQX4 1742 aa19.59■□□□□ 0.73
SIX1-203ENST00000554986 CDC42BPBQ9Y5S2 1711 aa19.56■□□□□ 0.72
SIX1-203ENST00000554986 PREX2Q70Z35 1606 aa19.56■□□□□ 0.72
SIX1-203ENST00000554986 GPATCH8Q9UKJ3 1502 aaKnown RBP19.55■□□□□ 0.72
SIX1-203ENST00000554986 PLCH2O75038 1416 aa19.55■□□□□ 0.72
SIX1-203ENST00000554986 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
SIX1-203ENST00000554986 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
SIX1-203ENST00000554986 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
SIX1-203ENST00000554986 ITSN2Q9NZM3 1697 aa19.51■□□□□ 0.71
SIX1-203ENST00000554986 ARHGAP5Q13017 1502 aa19.51■□□□□ 0.71
SIX1-203ENST00000554986 FANCAO15360 1455 aa19.5■□□□□ 0.71
SIX1-203ENST00000554986 TEX14Q8IWB6 1497 aa19.49■□□□□ 0.71
SIX1-203ENST00000554986 MYOM3Q5VTT5 1437 aa19.48■□□□□ 0.71
SIX1-203ENST00000554986 MIER1Q8N108 512 aa19.47■□□□□ 0.71
SIX1-203ENST00000554986 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
SIX1-203ENST00000554986 NEO1Q92859 1461 aa19.45■□□□□ 0.7
SIX1-203ENST00000554986 CFAP74Q9C0B2 1584 aa19.45■□□□□ 0.7
SIX1-203ENST00000554986 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
SIX1-203ENST00000554986 SAMD9LQ8IVG5 1584 aa19.45■□□□□ 0.7
SIX1-203ENST00000554986 AKNAQ7Z591 1439 aa19.44■□□□□ 0.7
SIX1-203ENST00000554986 YTHDC1Q96MU7 727 aaKnown RBP19.43■□□□□ 0.7
SIX1-203ENST00000554986 ZNF777Q9ULD5 760 aaPredicted RBP19.43■□□□□ 0.7
SIX1-203ENST00000554986 ZNF644Q9H582 1327 aaPredicted RBP19.43■□□□□ 0.7
SIX1-203ENST00000554986 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
SIX1-203ENST00000554986 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
SIX1-203ENST00000554986 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
SIX1-203ENST00000554986 ABCC1P33527 1531 aa19.4■□□□□ 0.7
SIX1-203ENST00000554986 ADGRL1O94910 1474 aa19.4■□□□□ 0.7
SIX1-203ENST00000554986 CAMSAP2Q08AD1 1489 aa19.39■□□□□ 0.69
SIX1-203ENST00000554986 ARHGEF12Q9NZN5 1544 aa19.39■□□□□ 0.69
SIX1-203ENST00000554986 PTPN23Q9H3S7 1636 aa19.38■□□□□ 0.69
SIX1-203ENST00000554986 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
SIX1-203ENST00000554986 SCAPERQ9BY12 1400 aa19.37■□□□□ 0.69
SIX1-203ENST00000554986 KDM6BO15054 1643 aa19.36■□□□□ 0.69
SIX1-203ENST00000554986 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
SIX1-203ENST00000554986 RICTORQ6R327 1708 aa19.34■□□□□ 0.69
SIX1-203ENST00000554986 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
SIX1-203ENST00000554986 HNRNPMP52272 730 aaKnown RBP eCLIP19.33■□□□□ 0.69
SIX1-203ENST00000554986 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.69
SIX1-203ENST00000554986 DENND4BO75064 1496 aaPredicted RBP19.33■□□□□ 0.69
SIX1-203ENST00000554986 PLEKHH2Q8IVE3 1493 aa19.33■□□□□ 0.69
SIX1-203ENST00000554986 RAPGEF3O95398 923 aa19.33■□□□□ 0.68
SIX1-203ENST00000554986 TRAPPC8Q9Y2L5 1435 aa19.33■□□□□ 0.68
SIX1-203ENST00000554986 MBD5Q9P267 1494 aa19.32■□□□□ 0.68
SIX1-203ENST00000554986 POGZQ7Z3K3 1410 aa19.32■□□□□ 0.68
SIX1-203ENST00000554986 RRBP1Q9P2E9 1410 aaKnown RBP19.31■□□□□ 0.68
SIX1-203ENST00000554986 AFAP1Q8N556 730 aa19.3■□□□□ 0.68
SIX1-203ENST00000554986 FAM50AQ14320 339 aaKnown RBP19.29■□□□□ 0.68
SIX1-203ENST00000554986 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.68
SIX1-203ENST00000554986 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
SIX1-203ENST00000554986 ANP32EQ9BTT0 268 aa19.27■□□□□ 0.68
SIX1-203ENST00000554986 KDM5CP41229 1560 aa19.27■□□□□ 0.68
SIX1-203ENST00000554986 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
SIX1-203ENST00000554986 CCDC141Q6ZP82 1450 aa19.25■□□□□ 0.67
SIX1-203ENST00000554986 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
SIX1-203ENST00000554986 ZMYM4Q5VZL5 1548 aa19.24■□□□□ 0.67
SIX1-203ENST00000554986 ABCC5O15440 1437 aa19.23■□□□□ 0.67
SIX1-203ENST00000554986 CROCC2H7BZ55 1655 aa19.22■□□□□ 0.67
SIX1-203ENST00000554986 DAPK1P53355 1430 aa19.22■□□□□ 0.67
SIX1-203ENST00000554986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.22■□□□□ 0.67
SIX1-203ENST00000554986 HECW2Q9P2P5 1572 aa19.21■□□□□ 0.67
SIX1-203ENST00000554986 KIDINS220Q9ULH0 1771 aa19.2■□□□□ 0.66
SIX1-203ENST00000554986 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
SIX1-203ENST00000554986 INO80Q9ULG1 1556 aaPredicted RBP19.2■□□□□ 0.66
SIX1-203ENST00000554986 PTPRKQ15262 1439 aa19.19■□□□□ 0.66
SIX1-203ENST00000554986 ZFYVE16Q7Z3T8 1539 aa19.19■□□□□ 0.66
SIX1-203ENST00000554986 MLH3Q9UHC1 1453 aa19.19■□□□□ 0.66
SIX1-203ENST00000554986 SPAG9O60271 1321 aaKnown RBP19.18■□□□□ 0.66
SIX1-203ENST00000554986 YEATS2Q9ULM3 1422 aa19.18■□□□□ 0.66
SIX1-203ENST00000554986 ATP7AQ04656 1500 aa19.18■□□□□ 0.66
SIX1-203ENST00000554986 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
SIX1-203ENST00000554986 ITGAEP38570 1179 aa19.17■□□□□ 0.66
SIX1-203ENST00000554986 C9orf84Q5VXU9 1444 aa19.17■□□□□ 0.66
SIX1-203ENST00000554986 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
SIX1-203ENST00000554986 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
SIX1-203ENST00000554986 ABCA6Q8N139 1617 aa19.16■□□□□ 0.66
SIX1-203ENST00000554986 TSPY4P0CV99 314 aa19.15■□□□□ 0.66
SIX1-203ENST00000554986 TSPY10P0CW01 314 aa19.15■□□□□ 0.66
SIX1-203ENST00000554986 MAGI2Q86UL8 1455 aa19.15■□□□□ 0.66
SIX1-203ENST00000554986 MYT1LQ9UL68 1186 aa19.15■□□□□ 0.66
SIX1-203ENST00000554986 ARHGEF40Q8TER5 1519 aa19.14■□□□□ 0.66
SIX1-203ENST00000554986 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
SIX1-203ENST00000554986 DIP2CQ9Y2E4 1556 aa19.14■□□□□ 0.65
SIX1-203ENST00000554986 RTEL1-TNFRSF6BF6WH68 1400 aa19.14■□□□□ 0.65
SIX1-203ENST00000554986 ADGBQ8N7X0 1667 aa19.11■□□□□ 0.65
SIX1-203ENST00000554986 BCL11AQ9H165 835 aa19.1■□□□□ 0.65
SIX1-203ENST00000554986 PLXNC1O60486 1568 aa19.1■□□□□ 0.65
SIX1-203ENST00000554986 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
SIX1-203ENST00000554986 SIGLEC1Q9BZZ2 1709 aa19.09■□□□□ 0.65
SIX1-203ENST00000554986 ATP10AO60312 1499 aa19.07■□□□□ 0.64
SIX1-203ENST00000554986 NCOA1Q15788 1441 aa19.07■□□□□ 0.64
SIX1-203ENST00000554986 RRP7BPQ9NSQ0 103 aa19.06■□□□□ 0.64
SIX1-203ENST00000554986 ANKRD30AQ9BXX3 1397 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms