RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 CARMIL2Q6F5E8 1435 aa10.6□□□□□ -0.71
TGFB3-202ENST00000554980 P3H3Q8IVL6 736 aa10.59□□□□□ -0.71
TGFB3-202ENST00000554980 CTTNBP2Q8WZ74 1663 aa10.59□□□□□ -0.71
TGFB3-202ENST00000554980 KIAA0556O60303 1618 aa10.58□□□□□ -0.72
TGFB3-202ENST00000554980 A0A0U1RQG5 324 aaPredicted RBP10.58□□□□□ -0.72
TGFB3-202ENST00000554980 FAM69CQ0P6D2 419 aa10.58□□□□□ -0.72
TGFB3-202ENST00000554980 NPM1P06748 294 aaKnown RBP eCLIP10.57□□□□□ -0.72
TGFB3-202ENST00000554980 PLB1Q6P1J6 1458 aa10.56□□□□□ -0.72
TGFB3-202ENST00000554980 ABCC10Q5T3U5 1492 aa10.56□□□□□ -0.72
TGFB3-202ENST00000554980 MAPKBP1O60336 1514 aa10.55□□□□□ -0.72
TGFB3-202ENST00000554980 UACAQ9BZF9 1416 aa10.55□□□□□ -0.72
TGFB3-202ENST00000554980 ABCC2Q92887 1545 aa10.54□□□□□ -0.72
TGFB3-202ENST00000554980 ARID3CA6NKF2 412 aa10.54□□□□□ -0.72
TGFB3-202ENST00000554980 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
TGFB3-202ENST00000554980 NECTIN2Q92692 538 aa10.54□□□□□ -0.72
TGFB3-202ENST00000554980 BRPF3Q9ULD4 1205 aa10.54□□□□□ -0.72
TGFB3-202ENST00000554980 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
TGFB3-202ENST00000554980 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
TGFB3-202ENST00000554980 ASXL2Q76L83 1435 aa10.52□□□□□ -0.72
TGFB3-202ENST00000554980 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.72
TGFB3-202ENST00000554980 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.52□□□□□ -0.73
TGFB3-202ENST00000554980 UHRF1BP1LA0JNW5 1464 aa10.52□□□□□ -0.73
TGFB3-202ENST00000554980 ERICH6BQ5W0A0 696 aa10.51□□□□□ -0.73
TGFB3-202ENST00000554980 EEA1Q15075 1411 aa10.51□□□□□ -0.73
TGFB3-202ENST00000554980 TSPOAP1O95153 1857 aa10.51□□□□□ -0.73
TGFB3-202ENST00000554980 KDM5BQ9UGL1 1544 aa10.5□□□□□ -0.73
TGFB3-202ENST00000554980 ZCCHC11Q5TAX3 1644 aaKnown RBP10.5□□□□□ -0.73
TGFB3-202ENST00000554980 CLSPNQ9HAW4 1339 aa10.49□□□□□ -0.73
TGFB3-202ENST00000554980 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
TGFB3-202ENST00000554980 ZNF592Q92610 1267 aa10.49□□□□□ -0.73
TGFB3-202ENST00000554980 ABCA8O94911 1581 aa10.48□□□□□ -0.73
TGFB3-202ENST00000554980 GOLGA3Q08378 1498 aa10.48□□□□□ -0.73
TGFB3-202ENST00000554980 NBR1Q14596 966 aa10.48□□□□□ -0.73
TGFB3-202ENST00000554980 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
TGFB3-202ENST00000554980 SAMD9Q5K651 1589 aa10.47□□□□□ -0.73
TGFB3-202ENST00000554980 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
TGFB3-202ENST00000554980 KIF21BO75037 1637 aa10.46□□□□□ -0.73
TGFB3-202ENST00000554980 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
TGFB3-202ENST00000554980 ARID3AQ99856 593 aa10.45□□□□□ -0.74
TGFB3-202ENST00000554980 EPRSP07814 1512 aaKnown RBP10.45□□□□□ -0.74
TGFB3-202ENST00000554980 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
TGFB3-202ENST00000554980 ATP10BO94823 1461 aa10.43□□□□□ -0.74
TGFB3-202ENST00000554980 TMED8Q6PL24 325 aaPredicted RBP10.42□□□□□ -0.74
TGFB3-202ENST00000554980 COL17A1Q9UMD9 1497 aaPredicted RBP10.42□□□□□ -0.74
TGFB3-202ENST00000554980 CLSTN1O94985 981 aa10.42□□□□□ -0.74
TGFB3-202ENST00000554980 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
TGFB3-202ENST00000554980 GLI2P10070 1586 aa10.41□□□□□ -0.74
TGFB3-202ENST00000554980 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
TGFB3-202ENST00000554980 NUP153P49790 1475 aaKnown RBP10.39□□□□□ -0.75
TGFB3-202ENST00000554980 MAP3K4Q9Y6R4 1608 aa10.39□□□□□ -0.75
TGFB3-202ENST00000554980 RAPGEF6Q8TEU7 1601 aa10.39□□□□□ -0.75
TGFB3-202ENST00000554980 KDM6BO15054 1643 aa10.39□□□□□ -0.75
TGFB3-202ENST00000554980 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
TGFB3-202ENST00000554980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.38□□□□□ -0.75
TGFB3-202ENST00000554980 ADRA2BP18089 450 aa10.38□□□□□ -0.75
TGFB3-202ENST00000554980 HNRNPUL2Q1KMD3 747 aaKnown RBP10.38□□□□□ -0.75
TGFB3-202ENST00000554980 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
TGFB3-202ENST00000554980 PSMD1Q99460 953 aa10.37□□□□□ -0.75
TGFB3-202ENST00000554980 NCLP19338 710 aaKnown RBP10.36□□□□□ -0.75
TGFB3-202ENST00000554980 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
TGFB3-202ENST00000554980 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
TGFB3-202ENST00000554980 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
TGFB3-202ENST00000554980 CD109Q6YHK3 1445 aa10.35□□□□□ -0.75
TGFB3-202ENST00000554980 CERS3Q8IU89 383 aa10.35□□□□□ -0.75
TGFB3-202ENST00000554980 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
TGFB3-202ENST00000554980 EFCAB5A4FU69 1503 aa10.34□□□□□ -0.75
TGFB3-202ENST00000554980 CDK13Q14004 1512 aaKnown RBP10.34□□□□□ -0.75
TGFB3-202ENST00000554980 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
TGFB3-202ENST00000554980 C1orf115Q9H7X2 142 aa10.34□□□□□ -0.75
TGFB3-202ENST00000554980 CWC22Q9HCG8 908 aaKnown RBP10.34□□□□□ -0.75
TGFB3-202ENST00000554980 TSHZ2Q9NRE2 1034 aa10.34□□□□□ -0.75
TGFB3-202ENST00000554980 PRDM10Q9NQV6 1147 aa10.33□□□□□ -0.76
TGFB3-202ENST00000554980 CHRM1P11229 460 aaPredicted RBP10.31□□□□□ -0.76
TGFB3-202ENST00000554980 GLIPR1L2Q4G1C9 344 aa10.31□□□□□ -0.76
TGFB3-202ENST00000554980 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
TGFB3-202ENST00000554980 ACIN1Q9UKV3 1341 aaKnown RBP10.31□□□□□ -0.76
TGFB3-202ENST00000554980 CFAP43Q8NDM7 1665 aa10.3□□□□□ -0.76
TGFB3-202ENST00000554980 MAGI3Q5TCQ9 1506 aa10.3□□□□□ -0.76
TGFB3-202ENST00000554980 CC2D2BQ6DHV5 1058 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 LRRIQ1Q96JM4 1722 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 TEX14Q8IWB6 1497 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 CNPY4Q8N129 248 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 PRDM16Q9HAZ2 1276 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 NAP1L2Q9ULW6 460 aaPredicted RBP10.29□□□□□ -0.76
TGFB3-202ENST00000554980 ABCA9Q8IUA7 1624 aa10.29□□□□□ -0.76
TGFB3-202ENST00000554980 PLEKHD1A6NEE1 506 aa10.28□□□□□ -0.76
TGFB3-202ENST00000554980 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
TGFB3-202ENST00000554980 TEX2Q8IWB9 1127 aa10.28□□□□□ -0.76
TGFB3-202ENST00000554980 RAPGEF3O95398 923 aa10.27□□□□□ -0.76
TGFB3-202ENST00000554980 NEUROD1Q13562 356 aa10.27□□□□□ -0.76
TGFB3-202ENST00000554980 RAD21O60216 631 aa10.27□□□□□ -0.77
TGFB3-202ENST00000554980 FMN1Q68DA7 1419 aa10.27□□□□□ -0.77
TGFB3-202ENST00000554980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.26□□□□□ -0.77
TGFB3-202ENST00000554980 TTC37Q6PGP7 1564 aa10.26□□□□□ -0.77
TGFB3-202ENST00000554980 FAM177A1Q8N128 213 aaPredicted RBP10.26□□□□□ -0.77
TGFB3-202ENST00000554980 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
TGFB3-202ENST00000554980 CLIP1P30622 1438 aa10.24□□□□□ -0.77
TGFB3-202ENST00000554980 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
TGFB3-202ENST00000554980 PCF11O94913 1555 aaKnown RBP10.24□□□□□ -0.77
TGFB3-202ENST00000554980 HECW1Q76N89 1606 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms