RNA–Protein interactions for RNA: ENST00000554732.5

LINC00639-202, long intergenic non-protein coding RNA 639, humanhuman

TSL 1 (best)

Gene LINC00639, Length 4,364 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00639-202ENST00000554732 PLIN1O60240 522 aa17.7■□□□□ 0.42
LINC00639-202ENST00000554732 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
LINC00639-202ENST00000554732 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
LINC00639-202ENST00000554732 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
LINC00639-202ENST00000554732 NEUROD2Q15784 382 aa17.68■□□□□ 0.42
LINC00639-202ENST00000554732 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
LINC00639-202ENST00000554732 ZBED9Q6R2W3 1325 aa17.66■□□□□ 0.42
LINC00639-202ENST00000554732 FOXD1Q16676 465 aa17.66■□□□□ 0.42
LINC00639-202ENST00000554732 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.42
LINC00639-202ENST00000554732 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
LINC00639-202ENST00000554732 PRKRIP1Q9H875 184 aaPredicted RBP17.66■□□□□ 0.42
LINC00639-202ENST00000554732 HSP90AB1P08238 724 aaKnown RBP17.65■□□□□ 0.42
LINC00639-202ENST00000554732 FRAT2O75474 233 aaPredicted RBP17.64■□□□□ 0.41
LINC00639-202ENST00000554732 FHAD1B1AJZ9 1412 aa17.63■□□□□ 0.41
LINC00639-202ENST00000554732 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
LINC00639-202ENST00000554732 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
LINC00639-202ENST00000554732 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
LINC00639-202ENST00000554732 RAPGEF2Q9Y4G8 1499 aa17.59■□□□□ 0.41
LINC00639-202ENST00000554732 FAM13BQ9NYF5 915 aa17.59■□□□□ 0.41
LINC00639-202ENST00000554732 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
LINC00639-202ENST00000554732 RRP1P56182 461 aaKnown RBP17.57■□□□□ 0.4
LINC00639-202ENST00000554732 FAM43AQ8N2R8 423 aa17.56■□□□□ 0.4
LINC00639-202ENST00000554732 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
LINC00639-202ENST00000554732 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
LINC00639-202ENST00000554732 CHGAP10645 457 aaKnown RBP17.55■□□□□ 0.4
LINC00639-202ENST00000554732 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
LINC00639-202ENST00000554732 ZMYND15Q9H091 742 aa17.54■□□□□ 0.4
LINC00639-202ENST00000554732 MS4A1P11836 297 aa17.54■□□□□ 0.4
LINC00639-202ENST00000554732 CRBNQ96SW2 442 aa17.54■□□□□ 0.4
LINC00639-202ENST00000554732 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
LINC00639-202ENST00000554732 FTSJ3Q8IY81 847 aaKnown RBP17.53■□□□□ 0.4
LINC00639-202ENST00000554732 CCDC184Q52MB2 194 aa17.52■□□□□ 0.4
LINC00639-202ENST00000554732 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
LINC00639-202ENST00000554732 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.39
LINC00639-202ENST00000554732 MFAP1P55081 439 aaKnown RBP17.5■□□□□ 0.39
LINC00639-202ENST00000554732 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
LINC00639-202ENST00000554732 GBP4Q96PP9 640 aa17.48■□□□□ 0.39
LINC00639-202ENST00000554732 AKNAQ7Z591 1439 aa17.47■□□□□ 0.39
LINC00639-202ENST00000554732 BACH2Q9BYV9 841 aa17.46■□□□□ 0.39
LINC00639-202ENST00000554732 RBM10P98175 930 aaKnown RBP17.45■□□□□ 0.38
LINC00639-202ENST00000554732 ESF1Q9H501 851 aaKnown RBP17.44■□□□□ 0.38
LINC00639-202ENST00000554732 SKAP1Q86WV1 359 aa17.43■□□□□ 0.38
LINC00639-202ENST00000554732 CENPQQ7L2Z9 268 aaPredicted RBP17.42■□□□□ 0.38
LINC00639-202ENST00000554732 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
LINC00639-202ENST00000554732 FHOD3Q2V2M9 1422 aa17.41■□□□□ 0.38
LINC00639-202ENST00000554732 FMN1Q68DA7 1419 aa17.4■□□□□ 0.38
LINC00639-202ENST00000554732 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
LINC00639-202ENST00000554732 STAG3Q9UJ98 1225 aa17.4■□□□□ 0.38
LINC00639-202ENST00000554732 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
LINC00639-202ENST00000554732 IGF1RP08069 1367 aa17.39■□□□□ 0.37
LINC00639-202ENST00000554732 RRP9O43818 475 aaKnown RBP17.39■□□□□ 0.37
LINC00639-202ENST00000554732 DCAF11Q8TEB1 546 aa17.38■□□□□ 0.37
LINC00639-202ENST00000554732 POGKQ9P215 609 aa17.38■□□□□ 0.37
LINC00639-202ENST00000554732 FGD5Q6ZNL6 1462 aa17.38■□□□□ 0.37
LINC00639-202ENST00000554732 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
LINC00639-202ENST00000554732 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
LINC00639-202ENST00000554732 MPHOSPH9Q99550 1183 aa17.37■□□□□ 0.37
LINC00639-202ENST00000554732 R3HCC1Q9Y3T6 440 aaKnown RBP17.36■□□□□ 0.37
LINC00639-202ENST00000554732 ARHGAP35Q9NRY4 1499 aa17.36■□□□□ 0.37
LINC00639-202ENST00000554732 CALD1Q05682 793 aaKnown RBP17.35■□□□□ 0.37
LINC00639-202ENST00000554732 RALBP1Q15311 655 aa17.35■□□□□ 0.37
LINC00639-202ENST00000554732 DDX49Q9Y6V7 483 aaKnown RBP17.35■□□□□ 0.37
LINC00639-202ENST00000554732 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
LINC00639-202ENST00000554732 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
LINC00639-202ENST00000554732 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
LINC00639-202ENST00000554732 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.37
LINC00639-202ENST00000554732 NLRP13Q86W25 1043 aa17.33■□□□□ 0.37
LINC00639-202ENST00000554732 CARMIL2Q6F5E8 1435 aa17.33■□□□□ 0.37
LINC00639-202ENST00000554732 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.37
LINC00639-202ENST00000554732 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
LINC00639-202ENST00000554732 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
LINC00639-202ENST00000554732 CFTRP13569 1480 aa17.32■□□□□ 0.36
LINC00639-202ENST00000554732 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
LINC00639-202ENST00000554732 MRE11P49959 708 aa17.31■□□□□ 0.36
LINC00639-202ENST00000554732 TNNT3P45378 269 aaPredicted RBP17.3■□□□□ 0.36
LINC00639-202ENST00000554732 JPH4Q96JJ6 628 aa17.3■□□□□ 0.36
LINC00639-202ENST00000554732 TRAK2O60296 914 aa17.29■□□□□ 0.36
LINC00639-202ENST00000554732 FOXD4L5Q5VV16 416 aaPredicted RBP17.29■□□□□ 0.36
LINC00639-202ENST00000554732 FOXD4L4Q8WXT5 416 aaPredicted RBP17.29■□□□□ 0.36
LINC00639-202ENST00000554732 RWDD1Q9H446 243 aaPredicted RBP17.29■□□□□ 0.36
LINC00639-202ENST00000554732 SENP3Q9H4L4 574 aaPredicted RBP17.28■□□□□ 0.36
LINC00639-202ENST00000554732 COG6Q9Y2V7 657 aa17.27■□□□□ 0.36
LINC00639-202ENST00000554732 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
LINC00639-202ENST00000554732 ESPNB1AK53 854 aa17.27■□□□□ 0.35
LINC00639-202ENST00000554732 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
LINC00639-202ENST00000554732 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.26■□□□□ 0.35
LINC00639-202ENST00000554732 KIAA1211Q6ZU35 1233 aa17.26■□□□□ 0.35
LINC00639-202ENST00000554732 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
LINC00639-202ENST00000554732 ZNF771Q7L3S4 317 aaPredicted RBP17.25■□□□□ 0.35
LINC00639-202ENST00000554732 BCL2L13Q9BXK5 485 aa17.25■□□□□ 0.35
LINC00639-202ENST00000554732 KIF7Q2M1P5 1343 aa17.25■□□□□ 0.35
LINC00639-202ENST00000554732 TPM2P07951 284 aa17.24■□□□□ 0.35
LINC00639-202ENST00000554732 MYBBP1AQ9BQG0 1328 aaKnown RBP17.24■□□□□ 0.35
LINC00639-202ENST00000554732 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
LINC00639-202ENST00000554732 CCDC7Q96M83 1385 aa17.24■□□□□ 0.35
LINC00639-202ENST00000554732 NESP48681 1621 aa17.24■□□□□ 0.35
LINC00639-202ENST00000554732 PTMSP20962 102 aa17.24■□□□□ 0.35
LINC00639-202ENST00000554732 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
LINC00639-202ENST00000554732 C11orf95C9JLR9 678 aaPredicted RBP17.23■□□□□ 0.35
LINC00639-202ENST00000554732 PMFBP1Q8TBY8 1022 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms