RNA–Protein interactions for RNA: ENST00000554447.5

CIPC-202, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-202ENST00000554447 MADDQ8WXG6 1647 aa19.63■□□□□ 0.73
CIPC-202ENST00000554447 HSPA2P54652 639 aa19.63■□□□□ 0.73
CIPC-202ENST00000554447 BCORL1Q5H9F3 1711 aa19.62■□□□□ 0.73
CIPC-202ENST00000554447 ABCA9Q8IUA7 1624 aa19.62■□□□□ 0.73
CIPC-202ENST00000554447 ARAP3Q8WWN8 1544 aa19.61■□□□□ 0.73
CIPC-202ENST00000554447 ARID4BQ4LE39 1312 aaPredicted RBP19.61■□□□□ 0.73
CIPC-202ENST00000554447 SUPT6HQ7KZ85 1726 aaKnown RBP19.6■□□□□ 0.73
CIPC-202ENST00000554447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.6■□□□□ 0.73
CIPC-202ENST00000554447 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
CIPC-202ENST00000554447 NCOA2Q15596 1464 aa19.58■□□□□ 0.72
CIPC-202ENST00000554447 RIMS1Q86UR5 1692 aaKnown RBP19.57■□□□□ 0.72
CIPC-202ENST00000554447 RAPGEF3O95398 923 aa19.56■□□□□ 0.72
CIPC-202ENST00000554447 CCNB3Q8WWL7 1395 aa19.54■□□□□ 0.72
CIPC-202ENST00000554447 TTC37Q6PGP7 1564 aa19.53■□□□□ 0.72
CIPC-202ENST00000554447 PLCH2O75038 1416 aa19.53■□□□□ 0.72
CIPC-202ENST00000554447 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
CIPC-202ENST00000554447 MYOM3Q5VTT5 1437 aa19.49■□□□□ 0.71
CIPC-202ENST00000554447 MIA2Q96PC5 1412 aa19.49■□□□□ 0.71
CIPC-202ENST00000554447 SPATA31D1Q6ZQQ2 1576 aa19.49■□□□□ 0.71
CIPC-202ENST00000554447 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
CIPC-202ENST00000554447 PHLDB1Q86UU1 1377 aa19.48■□□□□ 0.71
CIPC-202ENST00000554447 ITSN2Q9NZM3 1697 aa19.48■□□□□ 0.71
CIPC-202ENST00000554447 PREX2Q70Z35 1606 aa19.47■□□□□ 0.71
CIPC-202ENST00000554447 EFCAB2Q5VUJ9 269 aa19.46■□□□□ 0.71
CIPC-202ENST00000554447 NEO1Q92859 1461 aa19.46■□□□□ 0.71
CIPC-202ENST00000554447 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
CIPC-202ENST00000554447 CDC42BPAQ5VT25 1732 aa19.45■□□□□ 0.7
CIPC-202ENST00000554447 FRMPD1Q5SYB0 1578 aa19.44■□□□□ 0.7
CIPC-202ENST00000554447 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
CIPC-202ENST00000554447 FANCAO15360 1455 aa19.43■□□□□ 0.7
CIPC-202ENST00000554447 ARHGAP5Q13017 1502 aa19.43■□□□□ 0.7
CIPC-202ENST00000554447 PPARGC1BQ86YN6 1023 aaKnown RBP19.41■□□□□ 0.7
CIPC-202ENST00000554447 CDC42BPBQ9Y5S2 1711 aa19.41■□□□□ 0.7
CIPC-202ENST00000554447 FGD6Q6ZV73 1430 aa19.41■□□□□ 0.7
CIPC-202ENST00000554447 PLEKHH2Q8IVE3 1493 aa19.41■□□□□ 0.7
CIPC-202ENST00000554447 AKNAQ7Z591 1439 aa19.38■□□□□ 0.69
CIPC-202ENST00000554447 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
CIPC-202ENST00000554447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.38■□□□□ 0.69
CIPC-202ENST00000554447 KIAA1107Q9UPP5 1409 aa19.38■□□□□ 0.69
CIPC-202ENST00000554447 TCOF1Q13428 1488 aaKnown RBP19.37■□□□□ 0.69
CIPC-202ENST00000554447 RRBP1Q9P2E9 1410 aaKnown RBP19.36■□□□□ 0.69
CIPC-202ENST00000554447 MLECQ14165 292 aa19.34■□□□□ 0.69
CIPC-202ENST00000554447 RSPH4AQ5TD94 716 aa19.34■□□□□ 0.69
CIPC-202ENST00000554447 CAMSAP2Q08AD1 1489 aa19.34■□□□□ 0.69
CIPC-202ENST00000554447 SAMD9LQ8IVG5 1584 aa19.33■□□□□ 0.69
CIPC-202ENST00000554447 POGZQ7Z3K3 1410 aa19.33■□□□□ 0.68
CIPC-202ENST00000554447 PTPN23Q9H3S7 1636 aa19.33■□□□□ 0.68
CIPC-202ENST00000554447 ABCC1P33527 1531 aa19.32■□□□□ 0.68
CIPC-202ENST00000554447 SIGLEC1Q9BZZ2 1709 aa19.32■□□□□ 0.68
CIPC-202ENST00000554447 ZNF777Q9ULD5 760 aaPredicted RBP19.32■□□□□ 0.68
CIPC-202ENST00000554447 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
CIPC-202ENST00000554447 SCAPERQ9BY12 1400 aa19.3■□□□□ 0.68
CIPC-202ENST00000554447 RICTORQ6R327 1708 aa19.3■□□□□ 0.68
CIPC-202ENST00000554447 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
CIPC-202ENST00000554447 MBD5Q9P267 1494 aa19.28■□□□□ 0.68
CIPC-202ENST00000554447 ZNF644Q9H582 1327 aaPredicted RBP19.28■□□□□ 0.68
CIPC-202ENST00000554447 ARHGEF5Q12774 1597 aa19.27■□□□□ 0.68
CIPC-202ENST00000554447 STRCQ7RTU9 1775 aa19.27■□□□□ 0.68
CIPC-202ENST00000554447 ZNF518AQ6AHZ1 1483 aa19.27■□□□□ 0.67
CIPC-202ENST00000554447 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.67
CIPC-202ENST00000554447 YEATS2Q9ULM3 1422 aa19.26■□□□□ 0.67
CIPC-202ENST00000554447 SYCP2Q9BX26 1530 aa19.26■□□□□ 0.67
CIPC-202ENST00000554447 ARHGEF12Q9NZN5 1544 aa19.26■□□□□ 0.67
CIPC-202ENST00000554447 DMRT2Q9Y5R5 561 aa19.25■□□□□ 0.67
CIPC-202ENST00000554447 CCDC141Q6ZP82 1450 aa19.24■□□□□ 0.67
CIPC-202ENST00000554447 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
CIPC-202ENST00000554447 HNRNPMP52272 730 aaKnown RBP eCLIP19.23■□□□□ 0.67
CIPC-202ENST00000554447 ZFYVE16Q7Z3T8 1539 aa19.23■□□□□ 0.67
CIPC-202ENST00000554447 CEBPAP49715 358 aaPredicted RBP19.22■□□□□ 0.67
CIPC-202ENST00000554447 TRAPPC8Q9Y2L5 1435 aa19.22■□□□□ 0.67
CIPC-202ENST00000554447 KDM5CP41229 1560 aa19.22■□□□□ 0.67
CIPC-202ENST00000554447 DNMT1P26358 1616 aaKnown RBP19.21■□□□□ 0.67
CIPC-202ENST00000554447 SHANK2Q9UPX8 1470 aa19.21■□□□□ 0.67
CIPC-202ENST00000554447 RTEL1-TNFRSF6BF6WH68 1400 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 DAPK1P53355 1430 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 TSPY4P0CV99 314 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 TSPY10P0CW01 314 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 MAGI2Q86UL8 1455 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 ZMYM4Q5VZL5 1548 aa19.2■□□□□ 0.66
CIPC-202ENST00000554447 ABCC5O15440 1437 aa19.19■□□□□ 0.66
CIPC-202ENST00000554447 MLH3Q9UHC1 1453 aa19.18■□□□□ 0.66
CIPC-202ENST00000554447 AFAP1Q8N556 730 aa19.18■□□□□ 0.66
CIPC-202ENST00000554447 MAST1Q9Y2H9 1570 aa19.17■□□□□ 0.66
CIPC-202ENST00000554447 SPAG9O60271 1321 aaKnown RBP19.16■□□□□ 0.66
CIPC-202ENST00000554447 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
CIPC-202ENST00000554447 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
CIPC-202ENST00000554447 UHRF1BP1Q6BDS2 1440 aa19.13■□□□□ 0.65
CIPC-202ENST00000554447 CROCC2H7BZ55 1655 aa19.13■□□□□ 0.65
CIPC-202ENST00000554447 INO80Q9ULG1 1556 aaPredicted RBP19.12■□□□□ 0.65
CIPC-202ENST00000554447 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
CIPC-202ENST00000554447 ROCK1Q13464 1354 aa19.12■□□□□ 0.65
CIPC-202ENST00000554447 ATP7AQ04656 1500 aa19.11■□□□□ 0.65
CIPC-202ENST00000554447 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
CIPC-202ENST00000554447 PTPRTO14522 1441 aa19.1■□□□□ 0.65
CIPC-202ENST00000554447 ANKRD30AQ9BXX3 1397 aa19.09■□□□□ 0.65
CIPC-202ENST00000554447 PTPRKQ15262 1439 aa19.08■□□□□ 0.65
CIPC-202ENST00000554447 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
CIPC-202ENST00000554447 PLXNC1O60486 1568 aa19.08■□□□□ 0.65
CIPC-202ENST00000554447 NCOA1Q15788 1441 aa19.08■□□□□ 0.64
CIPC-202ENST00000554447 KIDINS220Q9ULH0 1771 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms