RNA–Protein interactions for RNA: ENST00000554329.6

TMEM253-203, Transcript of transmembrane protein 253, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM253, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-203ENST00000554329 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
TMEM253-203ENST00000554329 PREX2Q70Z35 1606 aa18.56■□□□□ 0.56
TMEM253-203ENST00000554329 PHLDB1Q86UU1 1377 aa18.55■□□□□ 0.56
TMEM253-203ENST00000554329 SIGLEC1Q9BZZ2 1709 aa18.54■□□□□ 0.56
TMEM253-203ENST00000554329 YEATS2Q9ULM3 1422 aa18.54■□□□□ 0.56
TMEM253-203ENST00000554329 EFCAB2Q5VUJ9 269 aa18.52■□□□□ 0.56
TMEM253-203ENST00000554329 ZNF777Q9ULD5 760 aaPredicted RBP18.52■□□□□ 0.56
TMEM253-203ENST00000554329 MTUS2Q5JR59 1369 aa18.52■□□□□ 0.55
TMEM253-203ENST00000554329 POGZQ7Z3K3 1410 aa18.51■□□□□ 0.55
TMEM253-203ENST00000554329 ARHGEF40Q8TER5 1519 aa18.51■□□□□ 0.55
TMEM253-203ENST00000554329 ARHGEF12Q9NZN5 1544 aa18.49■□□□□ 0.55
TMEM253-203ENST00000554329 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
TMEM253-203ENST00000554329 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
TMEM253-203ENST00000554329 AFAP1Q8N556 730 aa18.48■□□□□ 0.55
TMEM253-203ENST00000554329 ZFYVE16Q7Z3T8 1539 aa18.48■□□□□ 0.55
TMEM253-203ENST00000554329 ITSN2Q9NZM3 1697 aa18.47■□□□□ 0.55
TMEM253-203ENST00000554329 SAMD9LQ8IVG5 1584 aa18.47■□□□□ 0.55
TMEM253-203ENST00000554329 ABCC1P33527 1531 aa18.47■□□□□ 0.55
TMEM253-203ENST00000554329 ZMYM4Q5VZL5 1548 aa18.47■□□□□ 0.55
TMEM253-203ENST00000554329 GPATCH8Q9UKJ3 1502 aaKnown RBP18.47■□□□□ 0.55
TMEM253-203ENST00000554329 TIAM1Q13009 1591 aa18.47■□□□□ 0.55
TMEM253-203ENST00000554329 EHBP1L1Q8N3D4 1523 aa18.46■□□□□ 0.55
TMEM253-203ENST00000554329 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
TMEM253-203ENST00000554329 MYT1LQ9UL68 1186 aa18.45■□□□□ 0.54
TMEM253-203ENST00000554329 SYCP2Q9BX26 1530 aa18.44■□□□□ 0.54
TMEM253-203ENST00000554329 MLECQ14165 292 aa18.43■□□□□ 0.54
TMEM253-203ENST00000554329 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
TMEM253-203ENST00000554329 BCORL1Q5H9F3 1711 aa18.43■□□□□ 0.54
TMEM253-203ENST00000554329 CCNB3Q8WWL7 1395 aa18.42■□□□□ 0.54
TMEM253-203ENST00000554329 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
TMEM253-203ENST00000554329 ZNF644Q9H582 1327 aaPredicted RBP18.42■□□□□ 0.54
TMEM253-203ENST00000554329 HNRNPMP52272 730 aaKnown RBP eCLIP18.41■□□□□ 0.54
TMEM253-203ENST00000554329 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
TMEM253-203ENST00000554329 ZNF518AQ6AHZ1 1483 aa18.4■□□□□ 0.54
TMEM253-203ENST00000554329 KDM5CP41229 1560 aa18.4■□□□□ 0.54
TMEM253-203ENST00000554329 ABCA6Q8N139 1617 aa18.4■□□□□ 0.54
TMEM253-203ENST00000554329 ADAMTSL3P82987 1691 aa18.4■□□□□ 0.54
TMEM253-203ENST00000554329 HECW2Q9P2P5 1572 aa18.39■□□□□ 0.53
TMEM253-203ENST00000554329 CFDP1Q9UEE9 299 aaPredicted RBP18.39■□□□□ 0.53
TMEM253-203ENST00000554329 NCOA2Q15596 1464 aa18.39■□□□□ 0.53
TMEM253-203ENST00000554329 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
TMEM253-203ENST00000554329 SUPT6HQ7KZ85 1726 aaKnown RBP18.38■□□□□ 0.53
TMEM253-203ENST00000554329 DIP2CQ9Y2E4 1556 aa18.38■□□□□ 0.53
TMEM253-203ENST00000554329 PHF23Q9BUL5 403 aaPredicted RBP18.37■□□□□ 0.53
TMEM253-203ENST00000554329 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
TMEM253-203ENST00000554329 KIDINS220Q9ULH0 1771 aa18.35■□□□□ 0.53
TMEM253-203ENST00000554329 MAGI2Q86UL8 1455 aa18.34■□□□□ 0.53
TMEM253-203ENST00000554329 ATP10AO60312 1499 aa18.33■□□□□ 0.53
TMEM253-203ENST00000554329 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
TMEM253-203ENST00000554329 PTPRMP28827 1452 aa18.32■□□□□ 0.52
TMEM253-203ENST00000554329 FER1L4A9Z1Z3 1794 aa18.3■□□□□ 0.52
TMEM253-203ENST00000554329 CAMSAP2Q08AD1 1489 aa18.29■□□□□ 0.52
TMEM253-203ENST00000554329 MLH3Q9UHC1 1453 aa18.28■□□□□ 0.52
TMEM253-203ENST00000554329 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
TMEM253-203ENST00000554329 INO80Q9ULG1 1556 aaPredicted RBP18.26■□□□□ 0.51
TMEM253-203ENST00000554329 ATP7AQ04656 1500 aa18.26■□□□□ 0.51
TMEM253-203ENST00000554329 MBD5Q9P267 1494 aa18.25■□□□□ 0.51
TMEM253-203ENST00000554329 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
TMEM253-203ENST00000554329 CEBPAP49715 358 aaPredicted RBP18.23■□□□□ 0.51
TMEM253-203ENST00000554329 MAP3K1Q13233 1512 aa18.23■□□□□ 0.51
TMEM253-203ENST00000554329 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
TMEM253-203ENST00000554329 APLP2Q06481 763 aa18.22■□□□□ 0.51
TMEM253-203ENST00000554329 PPARGC1BQ86YN6 1023 aaKnown RBP18.22■□□□□ 0.51
TMEM253-203ENST00000554329 REREQ9P2R6 1566 aa18.19■□□□□ 0.5
TMEM253-203ENST00000554329 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
TMEM253-203ENST00000554329 MYOM3Q5VTT5 1437 aa18.18■□□□□ 0.5
TMEM253-203ENST00000554329 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
TMEM253-203ENST00000554329 A2MP01023 1474 aa18.16■□□□□ 0.5
TMEM253-203ENST00000554329 PLXNC1O60486 1568 aa18.15■□□□□ 0.5
TMEM253-203ENST00000554329 AGLP35573 1532 aa18.14■□□□□ 0.49
TMEM253-203ENST00000554329 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
TMEM253-203ENST00000554329 HSPA2P54652 639 aa18.13■□□□□ 0.49
TMEM253-203ENST00000554329 ARHGEF5Q12774 1597 aa18.13■□□□□ 0.49
TMEM253-203ENST00000554329 C3P01024 1663 aa18.12■□□□□ 0.49
TMEM253-203ENST00000554329 GGT6Q6P531 493 aa18.12■□□□□ 0.49
TMEM253-203ENST00000554329 CLTCQ00610 1675 aaKnown RBP18.12■□□□□ 0.49
TMEM253-203ENST00000554329 LMTK3Q96Q04 1460 aa18.11■□□□□ 0.49
TMEM253-203ENST00000554329 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
TMEM253-203ENST00000554329 MIA2Q96PC5 1412 aa18.07■□□□□ 0.48
TMEM253-203ENST00000554329 ESF1Q9H501 851 aaKnown RBP18.07■□□□□ 0.48
TMEM253-203ENST00000554329 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
TMEM253-203ENST00000554329 CROCC2H7BZ55 1655 aa18.06■□□□□ 0.48
TMEM253-203ENST00000554329 KIF3BO15066 747 aa18.05■□□□□ 0.48
TMEM253-203ENST00000554329 TSPY4P0CV99 314 aa18.05■□□□□ 0.48
TMEM253-203ENST00000554329 TSPY10P0CW01 314 aa18.05■□□□□ 0.48
TMEM253-203ENST00000554329 CHIC2Q9UKJ5 165 aa18.05■□□□□ 0.48
TMEM253-203ENST00000554329 ABCC5O15440 1437 aa18.04■□□□□ 0.48
TMEM253-203ENST00000554329 DHX29Q7Z478 1369 aaKnown RBP18.04■□□□□ 0.48
TMEM253-203ENST00000554329 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
TMEM253-203ENST00000554329 MAST1Q9Y2H9 1570 aa18.03■□□□□ 0.48
TMEM253-203ENST00000554329 PREX1Q8TCU6 1659 aa18.03■□□□□ 0.48
TMEM253-203ENST00000554329 DNMT1P26358 1616 aaKnown RBP18.01■□□□□ 0.47
TMEM253-203ENST00000554329 DAPK1P53355 1430 aa18.01■□□□□ 0.47
TMEM253-203ENST00000554329 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
TMEM253-203ENST00000554329 RRP7BPQ9NSQ0 103 aa18■□□□□ 0.47
TMEM253-203ENST00000554329 MROH2AA6NES4 1674 aa17.99■□□□□ 0.47
TMEM253-203ENST00000554329 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
TMEM253-203ENST00000554329 ZMYM3Q14202 1370 aa17.99■□□□□ 0.47
TMEM253-203ENST00000554329 CNTLNQ9NXG0 1405 aa17.96■□□□□ 0.47
TMEM253-203ENST00000554329 KIF15Q9NS87 1388 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms