RNA–Protein interactions for RNA: ENST00000554293.1

SEL1L-202, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 5

Gene SEL1L, Length 767 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-202ENST00000554293 KDM2AQ9Y2K7 1162 aa11.69□□□□□ -0.54
SEL1L-202ENST00000554293 SEC24BO95487 1268 aa11.68□□□□□ -0.54
SEL1L-202ENST00000554293 METRNQ9UJH8 293 aa11.67□□□□□ -0.54
SEL1L-202ENST00000554293 HMGXB3Q12766 1538 aa11.65□□□□□ -0.55
SEL1L-202ENST00000554293 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
SEL1L-202ENST00000554293 BAZ1AQ9NRL2 1556 aaPredicted RBP11.64□□□□□ -0.55
SEL1L-202ENST00000554293 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
SEL1L-202ENST00000554293 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
SEL1L-202ENST00000554293 NCAPD3P42695 1498 aa11.63□□□□□ -0.55
SEL1L-202ENST00000554293 COLQQ9Y215 455 aaPredicted RBP11.63□□□□□ -0.55
SEL1L-202ENST00000554293 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
SEL1L-202ENST00000554293 G3V3G9 751 aa11.61□□□□□ -0.55
SEL1L-202ENST00000554293 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
SEL1L-202ENST00000554293 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
SEL1L-202ENST00000554293 PEG3Q9GZU2 1588 aa11.61□□□□□ -0.55
SEL1L-202ENST00000554293 POTEFA5A3E0 1075 aa11.6□□□□□ -0.55
SEL1L-202ENST00000554293 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
SEL1L-202ENST00000554293 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
SEL1L-202ENST00000554293 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
SEL1L-202ENST00000554293 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
SEL1L-202ENST00000554293 NCKAP5LQ9HCH0 1330 aa11.54□□□□□ -0.56
SEL1L-202ENST00000554293 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
SEL1L-202ENST00000554293 PDE4AP27815 886 aa11.53□□□□□ -0.56
SEL1L-202ENST00000554293 CRISPLD2Q9H0B8 497 aa11.53□□□□□ -0.56
SEL1L-202ENST00000554293 MFSD10Q14728 455 aa11.49□□□□□ -0.57
SEL1L-202ENST00000554293 LARP6Q9BRS8 491 aaKnown RBP11.48□□□□□ -0.57
SEL1L-202ENST00000554293 P3H3Q8IVL6 736 aa11.47□□□□□ -0.57
SEL1L-202ENST00000554293 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
SEL1L-202ENST00000554293 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
SEL1L-202ENST00000554293 GPHNQ9NQX3 736 aaPredicted RBP11.47□□□□□ -0.57
SEL1L-202ENST00000554293 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
SEL1L-202ENST00000554293 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
SEL1L-202ENST00000554293 WIZO95785 1651 aa11.45□□□□□ -0.58
SEL1L-202ENST00000554293 NESP48681 1621 aa11.45□□□□□ -0.58
SEL1L-202ENST00000554293 CUX2O14529 1486 aa11.44□□□□□ -0.58
SEL1L-202ENST00000554293 LAMC3Q9Y6N6 1575 aa11.43□□□□□ -0.58
SEL1L-202ENST00000554293 PPP1R15BQ5SWA1 713 aa11.42□□□□□ -0.58
SEL1L-202ENST00000554293 KIF21AQ7Z4S6 1674 aa11.42□□□□□ -0.58
SEL1L-202ENST00000554293 THOC2Q8NI27 1593 aaKnown RBP11.41□□□□□ -0.58
SEL1L-202ENST00000554293 KIF3CO14782 793 aa11.41□□□□□ -0.58
SEL1L-202ENST00000554293 E2F4Q16254 413 aa11.41□□□□□ -0.58
SEL1L-202ENST00000554293 BCANQ96GW7 911 aa11.41□□□□□ -0.58
SEL1L-202ENST00000554293 C2orf72A6NCS6 295 aa11.4□□□□□ -0.58
SEL1L-202ENST00000554293 FOXK1P85037 733 aa11.4□□□□□ -0.58
SEL1L-202ENST00000554293 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
SEL1L-202ENST00000554293 KCNV2Q8TDN2 545 aa11.4□□□□□ -0.58
SEL1L-202ENST00000554293 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.39□□□□□ -0.59
SEL1L-202ENST00000554293 DSG2Q14126 1118 aa11.38□□□□□ -0.59
SEL1L-202ENST00000554293 CAMK2BQ13554 666 aa11.36□□□□□ -0.59
SEL1L-202ENST00000554293 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
SEL1L-202ENST00000554293 NBR1Q14596 966 aa11.35□□□□□ -0.59
SEL1L-202ENST00000554293 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
SEL1L-202ENST00000554293 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
SEL1L-202ENST00000554293 MAMSTRQ6ZN01 415 aa11.32□□□□□ -0.6
SEL1L-202ENST00000554293 ARHGEF1Q92888 912 aaKnown RBP11.32□□□□□ -0.6
SEL1L-202ENST00000554293 SCUBE2Q9NQ36 999 aa11.32□□□□□ -0.6
SEL1L-202ENST00000554293 TOP2AP11388 1531 aaKnown RBP11.3□□□□□ -0.6
SEL1L-202ENST00000554293 PRDM2Q13029 1718 aa11.29□□□□□ -0.6
SEL1L-202ENST00000554293 RSF1Q96T23 1441 aaPredicted RBP11.29□□□□□ -0.6
SEL1L-202ENST00000554293 ARIH1Q9Y4X5 557 aaPredicted RBP11.29□□□□□ -0.6
SEL1L-202ENST00000554293 PDS5BQ9NTI5 1447 aa11.27□□□□□ -0.6
SEL1L-202ENST00000554293 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
SEL1L-202ENST00000554293 EMILIN3Q9NT22 766 aa11.25□□□□□ -0.61
SEL1L-202ENST00000554293 SLAIN1Q8ND83 568 aa11.24□□□□□ -0.61
SEL1L-202ENST00000554293 WDR62O43379 1518 aa11.24□□□□□ -0.61
SEL1L-202ENST00000554293 MRC2Q9UBG0 1479 aa11.22□□□□□ -0.61
SEL1L-202ENST00000554293 DPYSL4O14531 572 aa11.21□□□□□ -0.61
SEL1L-202ENST00000554293 CFTRP13569 1480 aa11.19□□□□□ -0.62
SEL1L-202ENST00000554293 CEP164Q9UPV0 1460 aa11.19□□□□□ -0.62
SEL1L-202ENST00000554293 SLC34A2O95436 690 aa11.19□□□□□ -0.62
SEL1L-202ENST00000554293 LHX8Q68G74 356 aa11.19□□□□□ -0.62
SEL1L-202ENST00000554293 OXER1Q8TDS5 423 aa11.19□□□□□ -0.62
SEL1L-202ENST00000554293 PDIA6Q15084 440 aa11.18□□□□□ -0.62
SEL1L-202ENST00000554293 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
SEL1L-202ENST00000554293 FANCD2Q9BXW9 1451 aa11.18□□□□□ -0.62
SEL1L-202ENST00000554293 PTCD2Q8WV60 388 aaKnown RBP11.17□□□□□ -0.62
SEL1L-202ENST00000554293 SPDYE16A6NNV3 312 aaPredicted RBP11.16□□□□□ -0.62
SEL1L-202ENST00000554293 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
SEL1L-202ENST00000554293 OTUD5Q96G74 571 aa11.15□□□□□ -0.62
SEL1L-202ENST00000554293 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SEL1L-202ENST00000554293 TBC1D12O60347 775 aa11.14□□□□□ -0.63
SEL1L-202ENST00000554293 DOK7Q18PE1 504 aa11.14□□□□□ -0.63
SEL1L-202ENST00000554293 TESPA1A2RU30 521 aaPredicted RBP11.12□□□□□ -0.63
SEL1L-202ENST00000554293 ZNF316A6NFI3 1004 aaPredicted RBP11.12□□□□□ -0.63
SEL1L-202ENST00000554293 TULP1O00294 542 aaPredicted RBP11.11□□□□□ -0.63
SEL1L-202ENST00000554293 CCDC88BA6NC98 1476 aa11.11□□□□□ -0.63
SEL1L-202ENST00000554293 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
SEL1L-202ENST00000554293 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
SEL1L-202ENST00000554293 HOXB3P14651 431 aaPredicted RBP11.1□□□□□ -0.63
SEL1L-202ENST00000554293 PCDHGA4Q9Y5G9 962 aa11.1□□□□□ -0.63
SEL1L-202ENST00000554293 SNPHO15079 494 aa11.09□□□□□ -0.63
SEL1L-202ENST00000554293 EVI5O60447 810 aa11.08□□□□□ -0.64
SEL1L-202ENST00000554293 SMYD5Q6GMV2 418 aa11.08□□□□□ -0.64
SEL1L-202ENST00000554293 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
SEL1L-202ENST00000554293 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
SEL1L-202ENST00000554293 MLLT3P42568 568 aaPredicted RBP11.05□□□□□ -0.64
SEL1L-202ENST00000554293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEL1L-202ENST00000554293 PTGER2P43116 358 aa11.02□□□□□ -0.65
SEL1L-202ENST00000554293 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
SEL1L-202ENST00000554293 GPR153Q6NV75 609 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms