RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.65□□□□□ -0.7
LINC00517-202ENST00000554257 PLCH2O75038 1416 aa10.65□□□□□ -0.7
LINC00517-202ENST00000554257 MTUS2Q5JR59 1369 aa10.65□□□□□ -0.7
LINC00517-202ENST00000554257 TTBK1Q5TCY1 1321 aaPredicted RBP10.65□□□□□ -0.7
LINC00517-202ENST00000554257 GCC2Q8IWJ2 1684 aa10.65□□□□□ -0.71
LINC00517-202ENST00000554257 CAMSAP2Q08AD1 1489 aa10.64□□□□□ -0.71
LINC00517-202ENST00000554257 KDM5CP41229 1560 aa10.64□□□□□ -0.71
LINC00517-202ENST00000554257 INO80Q9ULG1 1556 aaPredicted RBP10.64□□□□□ -0.71
LINC00517-202ENST00000554257 MBD5Q9P267 1494 aa10.64□□□□□ -0.71
LINC00517-202ENST00000554257 ARID3CA6NKF2 412 aa10.62□□□□□ -0.71
LINC00517-202ENST00000554257 SIGLEC1Q9BZZ2 1709 aa10.61□□□□□ -0.71
LINC00517-202ENST00000554257 KIDINS220Q9ULH0 1771 aa10.61□□□□□ -0.71
LINC00517-202ENST00000554257 BCORL1Q5H9F3 1711 aa10.61□□□□□ -0.71
LINC00517-202ENST00000554257 SYCP2Q9BX26 1530 aa10.61□□□□□ -0.71
LINC00517-202ENST00000554257 PLXNC1O60486 1568 aa10.61□□□□□ -0.71
LINC00517-202ENST00000554257 PTPRKQ15262 1439 aa10.6□□□□□ -0.71
LINC00517-202ENST00000554257 ZMYM4Q5VZL5 1548 aa10.6□□□□□ -0.71
LINC00517-202ENST00000554257 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
LINC00517-202ENST00000554257 NEO1Q92859 1461 aa10.59□□□□□ -0.71
LINC00517-202ENST00000554257 SHANK2Q9UPX8 1470 aa10.59□□□□□ -0.71
LINC00517-202ENST00000554257 PLEKHD1A6NEE1 506 aa10.58□□□□□ -0.72
LINC00517-202ENST00000554257 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
LINC00517-202ENST00000554257 ZFYVE16Q7Z3T8 1539 aa10.58□□□□□ -0.72
LINC00517-202ENST00000554257 FANCAO15360 1455 aa10.57□□□□□ -0.72
LINC00517-202ENST00000554257 ADGRL2O95490 1459 aa10.57□□□□□ -0.72
LINC00517-202ENST00000554257 PPARGC1BQ86YN6 1023 aaKnown RBP10.57□□□□□ -0.72
LINC00517-202ENST00000554257 KDM6BO15054 1643 aa10.57□□□□□ -0.72
LINC00517-202ENST00000554257 CDK11AQ9UQ88 783 aaPredicted RBP10.57□□□□□ -0.72
LINC00517-202ENST00000554257 ABCA6Q8N139 1617 aa10.56□□□□□ -0.72
LINC00517-202ENST00000554257 CD109Q6YHK3 1445 aa10.56□□□□□ -0.72
LINC00517-202ENST00000554257 CCNB3Q8WWL7 1395 aa10.56□□□□□ -0.72
LINC00517-202ENST00000554257 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
LINC00517-202ENST00000554257 ABCC5O15440 1437 aa10.55□□□□□ -0.72
LINC00517-202ENST00000554257 DAPK1P53355 1430 aa10.55□□□□□ -0.72
LINC00517-202ENST00000554257 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
LINC00517-202ENST00000554257 HECW2Q9P2P5 1572 aa10.54□□□□□ -0.72
LINC00517-202ENST00000554257 COL17A1Q9UMD9 1497 aaPredicted RBP10.53□□□□□ -0.72
LINC00517-202ENST00000554257 PLEKHH2Q8IVE3 1493 aa10.53□□□□□ -0.72
LINC00517-202ENST00000554257 AKNAQ7Z591 1439 aa10.53□□□□□ -0.72
LINC00517-202ENST00000554257 POGZQ7Z3K3 1410 aa10.52□□□□□ -0.72
LINC00517-202ENST00000554257 REREQ9P2R6 1566 aa10.52□□□□□ -0.72
LINC00517-202ENST00000554257 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.73
LINC00517-202ENST00000554257 DIP2CQ9Y2E4 1556 aa10.52□□□□□ -0.73
LINC00517-202ENST00000554257 TRAPPC8Q9Y2L5 1435 aa10.52□□□□□ -0.73
LINC00517-202ENST00000554257 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
LINC00517-202ENST00000554257 EIF2AK4Q9P2K8 1649 aaKnown RBP10.52□□□□□ -0.73
LINC00517-202ENST00000554257 TEX14Q8IWB6 1497 aa10.51□□□□□ -0.73
LINC00517-202ENST00000554257 MROH1Q8NDA8 1641 aa10.51□□□□□ -0.73
LINC00517-202ENST00000554257 ADGRL1O94910 1474 aa10.51□□□□□ -0.73
LINC00517-202ENST00000554257 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
LINC00517-202ENST00000554257 APLP2Q06481 763 aa10.5□□□□□ -0.73
LINC00517-202ENST00000554257 UNC13BO14795 1591 aa10.5□□□□□ -0.73
LINC00517-202ENST00000554257 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00517-202ENST00000554257 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
LINC00517-202ENST00000554257 ARHGEF40Q8TER5 1519 aa10.49□□□□□ -0.73
LINC00517-202ENST00000554257 MLH3Q9UHC1 1453 aa10.49□□□□□ -0.73
LINC00517-202ENST00000554257 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
LINC00517-202ENST00000554257 HNRNPUL2Q1KMD3 747 aaKnown RBP10.48□□□□□ -0.73
LINC00517-202ENST00000554257 ZNF518AQ6AHZ1 1483 aa10.48□□□□□ -0.73
LINC00517-202ENST00000554257 MAGI2Q86UL8 1455 aa10.48□□□□□ -0.73
LINC00517-202ENST00000554257 KCNH8Q96L42 1107 aa10.48□□□□□ -0.73
LINC00517-202ENST00000554257 ROCK1Q13464 1354 aa10.48□□□□□ -0.73
LINC00517-202ENST00000554257 RTEL1-TNFRSF6BF6WH68 1400 aa10.47□□□□□ -0.73
LINC00517-202ENST00000554257 VWDEQ8N2E2 1590 aa10.46□□□□□ -0.73
LINC00517-202ENST00000554257 HFM1A2PYH4 1435 aa10.46□□□□□ -0.74
LINC00517-202ENST00000554257 NAIPQ13075 1403 aa10.46□□□□□ -0.74
LINC00517-202ENST00000554257 KDM5DQ9BY66 1539 aa10.45□□□□□ -0.74
LINC00517-202ENST00000554257 FAM69CQ0P6D2 419 aa10.45□□□□□ -0.74
LINC00517-202ENST00000554257 NCOA1Q15788 1441 aa10.45□□□□□ -0.74
LINC00517-202ENST00000554257 C9orf84Q5VXU9 1444 aa10.45□□□□□ -0.74
LINC00517-202ENST00000554257 TRIM26Q12899 539 aaPredicted RBP10.45□□□□□ -0.74
LINC00517-202ENST00000554257 SCAPERQ9BY12 1400 aa10.44□□□□□ -0.74
LINC00517-202ENST00000554257 CFDP1Q9UEE9 299 aaPredicted RBP10.44□□□□□ -0.74
LINC00517-202ENST00000554257 DENND4BO75064 1496 aaPredicted RBP10.44□□□□□ -0.74
LINC00517-202ENST00000554257 IQGAP3Q86VI3 1631 aa10.44□□□□□ -0.74
LINC00517-202ENST00000554257 DUOX2Q9NRD8 1548 aa10.43□□□□□ -0.74
LINC00517-202ENST00000554257 PRDM15P57071 1507 aaPredicted RBP10.42□□□□□ -0.74
LINC00517-202ENST00000554257 EFCAB2Q5VUJ9 269 aa10.42□□□□□ -0.74
LINC00517-202ENST00000554257 CEP152O94986 1710 aa10.41□□□□□ -0.74
LINC00517-202ENST00000554257 ZC3H13Q5T200 1668 aaKnown RBP10.4□□□□□ -0.74
LINC00517-202ENST00000554257 AGLP35573 1532 aa10.4□□□□□ -0.74
LINC00517-202ENST00000554257 HNRNPMP52272 730 aaKnown RBP eCLIP10.39□□□□□ -0.75
LINC00517-202ENST00000554257 ERBINQ96RT1 1412 aa10.39□□□□□ -0.75
LINC00517-202ENST00000554257 YEATS2Q9ULM3 1422 aa10.39□□□□□ -0.75
LINC00517-202ENST00000554257 E9PCH4 1651 aa10.37□□□□□ -0.75
LINC00517-202ENST00000554257 RSPH4AQ5TD94 716 aa10.37□□□□□ -0.75
LINC00517-202ENST00000554257 MROH2AA6NES4 1674 aa10.36□□□□□ -0.75
LINC00517-202ENST00000554257 TET3O43151 1660 aa10.36□□□□□ -0.75
LINC00517-202ENST00000554257 LMTK2Q8IWU2 1503 aa10.36□□□□□ -0.75
LINC00517-202ENST00000554257 PZPP20742 1482 aa10.36□□□□□ -0.75
LINC00517-202ENST00000554257 CAMSAP1Q5T5Y3 1602 aa10.36□□□□□ -0.75
LINC00517-202ENST00000554257 SETD5Q9C0A6 1442 aa10.35□□□□□ -0.75
LINC00517-202ENST00000554257 AFAP1Q8N556 730 aa10.35□□□□□ -0.75
LINC00517-202ENST00000554257 FAM135AQ9P2D6 1515 aa10.35□□□□□ -0.75
LINC00517-202ENST00000554257 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
LINC00517-202ENST00000554257 A2MP01023 1474 aa10.34□□□□□ -0.75
LINC00517-202ENST00000554257 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
LINC00517-202ENST00000554257 RAB3GAP2Q9H2M9 1393 aa10.33□□□□□ -0.76
LINC00517-202ENST00000554257 KIF15Q9NS87 1388 aa10.33□□□□□ -0.76
LINC00517-202ENST00000554257 ATP10AO60312 1499 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms