RNA–Protein interactions for RNA: ENST00000554227.6

SNRPN-207, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 5 BASIC

Gene SNRPN, Length 1,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-207ENST00000554227 PREX2Q70Z35 1606 aa28.69■■■□□ 2.18
SNRPN-207ENST00000554227 MYO5CQ9NQX4 1742 aa28.67■■■□□ 2.18
SNRPN-207ENST00000554227 CHIC2Q9UKJ5 165 aa28.62■■■□□ 2.17
SNRPN-207ENST00000554227 DNMT1P26358 1616 aaKnown RBP28.61■■■□□ 2.17
SNRPN-207ENST00000554227 ARHGAP5Q13017 1502 aa28.6■■■□□ 2.17
SNRPN-207ENST00000554227 ABCC5O15440 1437 aa28.6■■■□□ 2.17
SNRPN-207ENST00000554227 DAPK1P53355 1430 aa28.6■■■□□ 2.17
SNRPN-207ENST00000554227 SAMD9LQ8IVG5 1584 aa28.59■■■□□ 2.17
SNRPN-207ENST00000554227 CCER1Q8TC90 406 aaPredicted RBP28.59■■■□□ 2.17
SNRPN-207ENST00000554227 HRCP23327 699 aa28.58■■■□□ 2.17
SNRPN-207ENST00000554227 PLCH2O75038 1416 aa28.57■■■□□ 2.16
SNRPN-207ENST00000554227 SETD5Q9C0A6 1442 aa28.57■■■□□ 2.16
SNRPN-207ENST00000554227 ABCA9Q8IUA7 1624 aa28.57■■■□□ 2.16
SNRPN-207ENST00000554227 RAB3GAP2Q9H2M9 1393 aa28.56■■■□□ 2.16
SNRPN-207ENST00000554227 HNRNPMP52272 730 aaKnown RBP eCLIP28.54■■■□□ 2.166e-7■□□□□ 9.7
SNRPN-207ENST00000554227 RRP7BPQ9NSQ0 103 aa28.52■■■□□ 2.16
SNRPN-207ENST00000554227 MAPKBP1O60336 1514 aa28.51■■■□□ 2.16
SNRPN-207ENST00000554227 CROCC2H7BZ55 1655 aa28.49■■■□□ 2.15
SNRPN-207ENST00000554227 HFM1A2PYH4 1435 aa28.49■■■□□ 2.15
SNRPN-207ENST00000554227 NAIPQ13075 1403 aa28.48■■■□□ 2.15
SNRPN-207ENST00000554227 MBD5Q9P267 1494 aa28.48■■■□□ 2.15
SNRPN-207ENST00000554227 EFCAB2Q5VUJ9 269 aa28.48■■■□□ 2.15
SNRPN-207ENST00000554227 SYCP2Q9BX26 1530 aa28.47■■■□□ 2.15
SNRPN-207ENST00000554227 AKNAQ7Z591 1439 aa28.46■■■□□ 2.15
SNRPN-207ENST00000554227 ARHGEF5Q12774 1597 aa28.44■■■□□ 2.14
SNRPN-207ENST00000554227 ARAP3Q8WWN8 1544 aa28.44■■■□□ 2.14
SNRPN-207ENST00000554227 ARHGEF12Q9NZN5 1544 aa28.43■■■□□ 2.14
SNRPN-207ENST00000554227 GCC2Q8IWJ2 1684 aa28.42■■■□□ 2.14
SNRPN-207ENST00000554227 ADGBQ8N7X0 1667 aa28.4■■■□□ 2.14
SNRPN-207ENST00000554227 ROCK1Q13464 1354 aa28.39■■■□□ 2.14
SNRPN-207ENST00000554227 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
SNRPN-207ENST00000554227 FANCAO15360 1455 aa28.39■■■□□ 2.14
SNRPN-207ENST00000554227 KDM6BO15054 1643 aa28.39■■■□□ 2.14
SNRPN-207ENST00000554227 CD109Q6YHK3 1445 aa28.39■■■□□ 2.13
SNRPN-207ENST00000554227 CCDC141Q6ZP82 1450 aa28.38■■■□□ 2.13
SNRPN-207ENST00000554227 PLEKHH2Q8IVE3 1493 aa28.38■■■□□ 2.13
SNRPN-207ENST00000554227 KIAA1107Q9UPP5 1409 aa28.38■■■□□ 2.13
SNRPN-207ENST00000554227 ABCC1P33527 1531 aa28.38■■■□□ 2.13
SNRPN-207ENST00000554227 C9orf84Q5VXU9 1444 aa28.37■■■□□ 2.13
SNRPN-207ENST00000554227 TSPY4P0CV99 314 aa28.36■■■□□ 2.13
SNRPN-207ENST00000554227 TSPY10P0CW01 314 aa28.36■■■□□ 2.13
SNRPN-207ENST00000554227 NCOA1Q15788 1441 aa28.36■■■□□ 2.13
SNRPN-207ENST00000554227 SHANK2Q9UPX8 1470 aa28.35■■■□□ 2.13
SNRPN-207ENST00000554227 ADGRL2O95490 1459 aa28.34■■■□□ 2.13
SNRPN-207ENST00000554227 RSPH4AQ5TD94 716 aa28.33■■■□□ 2.13
SNRPN-207ENST00000554227 TRAPPC8Q9Y2L5 1435 aa28.32■■■□□ 2.12
SNRPN-207ENST00000554227 ANKRD30AQ9BXX3 1397 aa28.3■■■□□ 2.12
SNRPN-207ENST00000554227 DIP2BQ9P265 1576 aa28.3■■■□□ 2.12
SNRPN-207ENST00000554227 FAM69CQ0P6D2 419 aa28.29■■■□□ 2.12
SNRPN-207ENST00000554227 GLI2P10070 1586 aa28.29■■■□□ 2.12
SNRPN-207ENST00000554227 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
SNRPN-207ENST00000554227 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
SNRPN-207ENST00000554227 ADGRL1O94910 1474 aa28.27■■■□□ 2.12
SNRPN-207ENST00000554227 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
SNRPN-207ENST00000554227 SCAPERQ9BY12 1400 aa28.25■■■□□ 2.11
SNRPN-207ENST00000554227 MAST1Q9Y2H9 1570 aa28.24■■■□□ 2.11
SNRPN-207ENST00000554227 TSPOAP1O95153 1857 aa28.2■■■□□ 2.11
SNRPN-207ENST00000554227 CFAP74Q9C0B2 1584 aa28.2■■■□□ 2.11
SNRPN-207ENST00000554227 KIF15Q9NS87 1388 aa28.2■■■□□ 2.11
SNRPN-207ENST00000554227 DNAJC5Q9H3Z4 198 aa28.19■■■□□ 2.1
SNRPN-207ENST00000554227 KIF13AQ9H1H9 1805 aa28.19■■■□□ 2.1
SNRPN-207ENST00000554227 TRIM52Q96A61 297 aa28.19■■■□□ 2.1
SNRPN-207ENST00000554227 ANKRD50Q9ULJ7 1429 aa28.17■■■□□ 2.1
SNRPN-207ENST00000554227 SPAG9O60271 1321 aaKnown RBP28.15■■■□□ 2.1
SNRPN-207ENST00000554227 NEO1Q92859 1461 aa28.14■■■□□ 2.1
SNRPN-207ENST00000554227 PLXNC1O60486 1568 aa28.13■■■□□ 2.09
SNRPN-207ENST00000554227 PPRC1Q5VV67 1664 aaKnown RBP28.13■■■□□ 2.09
SNRPN-207ENST00000554227 ZFYVE16Q7Z3T8 1539 aa28.11■■■□□ 2.09
SNRPN-207ENST00000554227 CLSPNQ9HAW4 1339 aa28.11■■■□□ 2.09
SNRPN-207ENST00000554227 INO80Q9ULG1 1556 aaPredicted RBP28.08■■■□□ 2.09
SNRPN-207ENST00000554227 RTEL1-TNFRSF6BF6WH68 1400 aa28.07■■■□□ 2.08
SNRPN-207ENST00000554227 ATP7AQ04656 1500 aa28.07■■■□□ 2.08
SNRPN-207ENST00000554227 POGZQ7Z3K3 1410 aa28.07■■■□□ 2.08
SNRPN-207ENST00000554227 ZNF518AQ6AHZ1 1483 aa28.07■■■□□ 2.08
SNRPN-207ENST00000554227 MYT1LQ9UL68 1186 aa28.06■■■□□ 2.08
SNRPN-207ENST00000554227 DENND4BO75064 1496 aaPredicted RBP28.06■■■□□ 2.08
SNRPN-207ENST00000554227 RAPGEF3O95398 923 aa28.05■■■□□ 2.08
SNRPN-207ENST00000554227 MPHOSPH9Q99550 1183 aa28.04■■■□□ 2.08
SNRPN-207ENST00000554227 DUOX2Q9NRD8 1548 aa28.03■■■□□ 2.08
SNRPN-207ENST00000554227 KIDINS220Q9ULH0 1771 aa28.03■■■□□ 2.08
SNRPN-207ENST00000554227 KDM5CP41229 1560 aa28.01■■■□□ 2.07
SNRPN-207ENST00000554227 SIN3AQ96ST3 1273 aa28.01■■■□□ 2.07
SNRPN-207ENST00000554227 PZPP20742 1482 aa28■■■□□ 2.07
SNRPN-207ENST00000554227 RICTORQ6R327 1708 aa27.99■■■□□ 2.07
SNRPN-207ENST00000554227 ACIN1Q9UKV3 1341 aaKnown RBP27.98■■■□□ 2.07
SNRPN-207ENST00000554227 FOXD1Q16676 465 aa27.98■■■□□ 2.07
SNRPN-207ENST00000554227 SLC4A1APQ9BWU0 796 aaKnown RBP27.97■■■□□ 2.07
SNRPN-207ENST00000554227 TEX14Q8IWB6 1497 aa27.97■■■□□ 2.07
SNRPN-207ENST00000554227 NUP155O75694 1391 aa27.96■■■□□ 2.07
SNRPN-207ENST00000554227 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
SNRPN-207ENST00000554227 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
SNRPN-207ENST00000554227 HECW2Q9P2P5 1572 aa27.94■■■□□ 2.06
SNRPN-207ENST00000554227 MLH3Q9UHC1 1453 aa27.93■■■□□ 2.06
SNRPN-207ENST00000554227 FRMPD1Q5SYB0 1578 aa27.92■■■□□ 2.06
SNRPN-207ENST00000554227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.91■■■□□ 2.062e-8■■□□□ 12.6
SNRPN-207ENST00000554227 UNC13BO14795 1591 aa27.91■■■□□ 2.06
SNRPN-207ENST00000554227 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
SNRPN-207ENST00000554227 ABCA6Q8N139 1617 aa27.88■■■□□ 2.05
SNRPN-207ENST00000554227 DHX29Q7Z478 1369 aaKnown RBP27.88■■■□□ 2.05
SNRPN-207ENST00000554227 PKD2Q13563 968 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms