RNA–Protein interactions for RNA: ENST00000554196.1

LINC00520-202, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 514 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-202ENST00000554196 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
LINC00520-202ENST00000554196 CDC42BPBQ9Y5S2 1711 aa13.75□□□□□ -0.21
LINC00520-202ENST00000554196 CCER1Q8TC90 406 aaPredicted RBP13.74□□□□□ -0.21
LINC00520-202ENST00000554196 PLEKHD1A6NEE1 506 aa13.73□□□□□ -0.21
LINC00520-202ENST00000554196 GPATCH8Q9UKJ3 1502 aaKnown RBP13.73□□□□□ -0.21
LINC00520-202ENST00000554196 CAMSAP2Q08AD1 1489 aa13.73□□□□□ -0.21
LINC00520-202ENST00000554196 TTC37Q6PGP7 1564 aa13.72□□□□□ -0.21
LINC00520-202ENST00000554196 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
LINC00520-202ENST00000554196 SETD5Q9C0A6 1442 aa13.72□□□□□ -0.21
LINC00520-202ENST00000554196 CLSPNQ9HAW4 1339 aa13.71□□□□□ -0.21
LINC00520-202ENST00000554196 HFM1A2PYH4 1435 aa13.71□□□□□ -0.22
LINC00520-202ENST00000554196 ARHGEF5Q12774 1597 aa13.71□□□□□ -0.22
LINC00520-202ENST00000554196 ARAP3Q8WWN8 1544 aa13.69□□□□□ -0.22
LINC00520-202ENST00000554196 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.69□□□□□ -0.22
LINC00520-202ENST00000554196 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
LINC00520-202ENST00000554196 DAPK1P53355 1430 aa13.67□□□□□ -0.22
LINC00520-202ENST00000554196 RAB3GAP2Q9H2M9 1393 aa13.67□□□□□ -0.22
LINC00520-202ENST00000554196 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
LINC00520-202ENST00000554196 ROCK1Q13464 1354 aa13.66□□□□□ -0.22
LINC00520-202ENST00000554196 PLEKHH2Q8IVE3 1493 aa13.66□□□□□ -0.22
LINC00520-202ENST00000554196 SAMD9LQ8IVG5 1584 aa13.66□□□□□ -0.22
LINC00520-202ENST00000554196 ITGAEP38570 1179 aa13.65□□□□□ -0.22
LINC00520-202ENST00000554196 DHX57Q6P158 1386 aaKnown RBP13.65□□□□□ -0.22
LINC00520-202ENST00000554196 ADGRL2O95490 1459 aa13.65□□□□□ -0.22
LINC00520-202ENST00000554196 WDR7Q9Y4E6 1490 aa13.65□□□□□ -0.22
LINC00520-202ENST00000554196 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
LINC00520-202ENST00000554196 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
LINC00520-202ENST00000554196 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
LINC00520-202ENST00000554196 MAST1Q9Y2H9 1570 aa13.63□□□□□ -0.23
LINC00520-202ENST00000554196 ARHGAP5Q13017 1502 aa13.63□□□□□ -0.23
LINC00520-202ENST00000554196 NAIPQ13075 1403 aa13.63□□□□□ -0.23
LINC00520-202ENST00000554196 CFAP74Q9C0B2 1584 aa13.62□□□□□ -0.23
LINC00520-202ENST00000554196 RIMBP3CA6NJZ7 1639 aa13.62□□□□□ -0.23
LINC00520-202ENST00000554196 RIMBP3BA6NNM3 1639 aa13.62□□□□□ -0.23
LINC00520-202ENST00000554196 RIMBP3Q9UFD9 1639 aa13.62□□□□□ -0.23
LINC00520-202ENST00000554196 CFDP1Q9UEE9 299 aaPredicted RBP13.62□□□□□ -0.23
LINC00520-202ENST00000554196 ABCC5O15440 1437 aa13.62□□□□□ -0.23
LINC00520-202ENST00000554196 CCDC141Q6ZP82 1450 aa13.6□□□□□ -0.23
LINC00520-202ENST00000554196 PLXNC1O60486 1568 aa13.59□□□□□ -0.23
LINC00520-202ENST00000554196 ABCC1P33527 1531 aa13.59□□□□□ -0.23
LINC00520-202ENST00000554196 MAPKBP1O60336 1514 aa13.58□□□□□ -0.24
LINC00520-202ENST00000554196 SYCP2Q9BX26 1530 aa13.58□□□□□ -0.24
LINC00520-202ENST00000554196 KIAA1107Q9UPP5 1409 aa13.56□□□□□ -0.24
LINC00520-202ENST00000554196 PLCH2O75038 1416 aa13.56□□□□□ -0.24
LINC00520-202ENST00000554196 C9orf84Q5VXU9 1444 aa13.55□□□□□ -0.24
LINC00520-202ENST00000554196 ASXL2Q76L83 1435 aa13.55□□□□□ -0.24
LINC00520-202ENST00000554196 ANKRD30AQ9BXX3 1397 aa13.54□□□□□ -0.24
LINC00520-202ENST00000554196 MBD5Q9P267 1494 aa13.54□□□□□ -0.24
LINC00520-202ENST00000554196 KDM6BO15054 1643 aa13.53□□□□□ -0.24
LINC00520-202ENST00000554196 RSPH4AQ5TD94 716 aa13.52□□□□□ -0.25
LINC00520-202ENST00000554196 SLC4A1APQ9BWU0 796 aaKnown RBP13.52□□□□□ -0.25
LINC00520-202ENST00000554196 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
LINC00520-202ENST00000554196 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
LINC00520-202ENST00000554196 NPM1P06748 294 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00520-202ENST00000554196 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
LINC00520-202ENST00000554196 ZNF777Q9ULD5 760 aaPredicted RBP13.49□□□□□ -0.25
LINC00520-202ENST00000554196 UNC13BO14795 1591 aa13.49□□□□□ -0.25
LINC00520-202ENST00000554196 GLI2P10070 1586 aa13.49□□□□□ -0.25
LINC00520-202ENST00000554196 MAP3K4Q9Y6R4 1608 aa13.48□□□□□ -0.25
LINC00520-202ENST00000554196 INO80Q9ULG1 1556 aaPredicted RBP13.48□□□□□ -0.25
LINC00520-202ENST00000554196 DMRT2Q9Y5R5 561 aa13.47□□□□□ -0.25
LINC00520-202ENST00000554196 FANCAO15360 1455 aa13.47□□□□□ -0.25
LINC00520-202ENST00000554196 ZFYVE16Q7Z3T8 1539 aa13.46□□□□□ -0.25
LINC00520-202ENST00000554196 EFCAB2Q5VUJ9 269 aa13.46□□□□□ -0.25
LINC00520-202ENST00000554196 RRP7BPQ9NSQ0 103 aa13.46□□□□□ -0.25
LINC00520-202ENST00000554196 CHIC2Q9UKJ5 165 aa13.46□□□□□ -0.25
LINC00520-202ENST00000554196 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
LINC00520-202ENST00000554196 TSPY4P0CV99 314 aa13.45□□□□□ -0.26
LINC00520-202ENST00000554196 TSPY10P0CW01 314 aa13.45□□□□□ -0.26
LINC00520-202ENST00000554196 ANKRD50Q9ULJ7 1429 aa13.45□□□□□ -0.26
LINC00520-202ENST00000554196 EIF2AK4Q9P2K8 1649 aaKnown RBP13.44□□□□□ -0.26
LINC00520-202ENST00000554196 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
LINC00520-202ENST00000554196 KIF15Q9NS87 1388 aa13.44□□□□□ -0.26
LINC00520-202ENST00000554196 ARHGEF12Q9NZN5 1544 aa13.44□□□□□ -0.26
LINC00520-202ENST00000554196 RTEL1-TNFRSF6BF6WH68 1400 aa13.43□□□□□ -0.26
LINC00520-202ENST00000554196 ADGRL1O94910 1474 aa13.42□□□□□ -0.26
LINC00520-202ENST00000554196 DIP2BQ9P265 1576 aa13.42□□□□□ -0.26
LINC00520-202ENST00000554196 ATP7AQ04656 1500 aa13.42□□□□□ -0.26
LINC00520-202ENST00000554196 IQGAP3Q86VI3 1631 aa13.42□□□□□ -0.26
LINC00520-202ENST00000554196 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
LINC00520-202ENST00000554196 NEO1Q92859 1461 aa13.41□□□□□ -0.26
LINC00520-202ENST00000554196 KDM5CP41229 1560 aa13.41□□□□□ -0.26
LINC00520-202ENST00000554196 DEPDC5O75140 1603 aa13.4□□□□□ -0.26
LINC00520-202ENST00000554196 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
LINC00520-202ENST00000554196 MAGI2Q86UL8 1455 aa13.4□□□□□ -0.26
LINC00520-202ENST00000554196 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00520-202ENST00000554196 PZPP20742 1482 aa13.39□□□□□ -0.27
LINC00520-202ENST00000554196 HECW2Q9P2P5 1572 aa13.39□□□□□ -0.27
LINC00520-202ENST00000554196 CD109Q6YHK3 1445 aa13.39□□□□□ -0.27
LINC00520-202ENST00000554196 KIDINS220Q9ULH0 1771 aa13.38□□□□□ -0.27
LINC00520-202ENST00000554196 DENND4BO75064 1496 aaPredicted RBP13.38□□□□□ -0.27
LINC00520-202ENST00000554196 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
LINC00520-202ENST00000554196 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
LINC00520-202ENST00000554196 RICTORQ6R327 1708 aa13.38□□□□□ -0.27
LINC00520-202ENST00000554196 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
LINC00520-202ENST00000554196 BCORL1Q5H9F3 1711 aa13.37□□□□□ -0.27
LINC00520-202ENST00000554196 TRAPPC8Q9Y2L5 1435 aa13.37□□□□□ -0.27
LINC00520-202ENST00000554196 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
LINC00520-202ENST00000554196 POGZQ7Z3K3 1410 aa13.35□□□□□ -0.27
LINC00520-202ENST00000554196 PPRC1Q5VV67 1664 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms