RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 LRRIQ1Q96JM4 1722 aa19.34■□□□□ 0.69
TUBB3-204ENST00000554116 KIF14Q15058 1648 aa19.33■□□□□ 0.69
TUBB3-204ENST00000554116 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
TUBB3-204ENST00000554116 FER1L4A9Z1Z3 1794 aa19.31■□□□□ 0.68
TUBB3-204ENST00000554116 MYO5CQ9NQX4 1742 aa19.31■□□□□ 0.68
TUBB3-204ENST00000554116 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
TUBB3-204ENST00000554116 MLECQ14165 292 aa19.3■□□□□ 0.68
TUBB3-204ENST00000554116 PLPPR3Q6T4P5 718 aa19.29■□□□□ 0.68
TUBB3-204ENST00000554116 ATP10AO60312 1499 aa19.28■□□□□ 0.68
TUBB3-204ENST00000554116 FMN1Q68DA7 1419 aa19.28■□□□□ 0.68
TUBB3-204ENST00000554116 UBTFP17480 764 aaKnown RBP19.26■□□□□ 0.67
TUBB3-204ENST00000554116 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
TUBB3-204ENST00000554116 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-204ENST00000554116 TROQ12816 1431 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-204ENST00000554116 C9orf84Q5VXU9 1444 aa19.25■□□□□ 0.67
TUBB3-204ENST00000554116 KDM5CP41229 1560 aa19.24■□□□□ 0.67
TUBB3-204ENST00000554116 CDC42BPBQ9Y5S2 1711 aa19.23■□□□□ 0.67
TUBB3-204ENST00000554116 CEBPAP49715 358 aaPredicted RBP19.23■□□□□ 0.67
TUBB3-204ENST00000554116 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
TUBB3-204ENST00000554116 AFAP1Q8N556 730 aa19.23■□□□□ 0.67
TUBB3-204ENST00000554116 CERKQ8TCT0 537 aa19.22■□□□□ 0.67
TUBB3-204ENST00000554116 DIP2CQ9Y2E4 1556 aa19.2■□□□□ 0.66
TUBB3-204ENST00000554116 ZNF518AQ6AHZ1 1483 aa19.2■□□□□ 0.66
TUBB3-204ENST00000554116 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
TUBB3-204ENST00000554116 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
TUBB3-204ENST00000554116 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
TUBB3-204ENST00000554116 CDK11AQ9UQ88 783 aaPredicted RBP19.18■□□□□ 0.66
TUBB3-204ENST00000554116 ABCA6Q8N139 1617 aa19.17■□□□□ 0.66
TUBB3-204ENST00000554116 REREQ9P2R6 1566 aa19.16■□□□□ 0.66
TUBB3-204ENST00000554116 TRAPPC8Q9Y2L5 1435 aa19.16■□□□□ 0.66
TUBB3-204ENST00000554116 MLH3Q9UHC1 1453 aa19.15■□□□□ 0.66
TUBB3-204ENST00000554116 SETD1BQ9UPS6 1966 aaKnown RBP19.14■□□□□ 0.65
TUBB3-204ENST00000554116 PREX2Q70Z35 1606 aa19.14■□□□□ 0.65
TUBB3-204ENST00000554116 ABCC1P33527 1531 aa19.12■□□□□ 0.65
TUBB3-204ENST00000554116 CLIP1P30622 1438 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 KIDINS220Q9ULH0 1771 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 CDC42BPAQ5VT25 1732 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 C3P01024 1663 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 ITSN2Q9NZM3 1697 aa19.11■□□□□ 0.65
TUBB3-204ENST00000554116 AGLP35573 1532 aa19.09■□□□□ 0.65
TUBB3-204ENST00000554116 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
TUBB3-204ENST00000554116 DISP3Q9P2K9 1392 aa19.06■□□□□ 0.64
TUBB3-204ENST00000554116 CCDC18Q5T9S5 1454 aa19.05■□□□□ 0.64
TUBB3-204ENST00000554116 UHRF1BP1Q6BDS2 1440 aa19.05■□□□□ 0.64
TUBB3-204ENST00000554116 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
TUBB3-204ENST00000554116 MYT1LQ9UL68 1186 aa19.02■□□□□ 0.64
TUBB3-204ENST00000554116 SOCS7O14512 581 aa19.01■□□□□ 0.63
TUBB3-204ENST00000554116 GPATCH8Q9UKJ3 1502 aaKnown RBP19■□□□□ 0.63
TUBB3-204ENST00000554116 FYCO1Q9BQS8 1478 aa19■□□□□ 0.63
TUBB3-204ENST00000554116 PTPRTO14522 1441 aa18.99■□□□□ 0.63
TUBB3-204ENST00000554116 ILDR2Q71H61 639 aa18.98■□□□□ 0.63
TUBB3-204ENST00000554116 LTBP4Q8N2S1 1624 aa18.97■□□□□ 0.63
TUBB3-204ENST00000554116 SYCP2Q9BX26 1530 aa18.97■□□□□ 0.63
TUBB3-204ENST00000554116 SPATA31D1Q6ZQQ2 1576 aa18.96■□□□□ 0.63
TUBB3-204ENST00000554116 HNRNPMP52272 730 aaKnown RBP eCLIP18.95■□□□□ 0.62
TUBB3-204ENST00000554116 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
TUBB3-204ENST00000554116 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
TUBB3-204ENST00000554116 CNTLNQ9NXG0 1405 aa18.93■□□□□ 0.62
TUBB3-204ENST00000554116 ZNF777Q9ULD5 760 aaPredicted RBP18.93■□□□□ 0.62
TUBB3-204ENST00000554116 SUPT6HQ7KZ85 1726 aaKnown RBP18.93■□□□□ 0.62
TUBB3-204ENST00000554116 PLXNC1O60486 1568 aa18.93■□□□□ 0.62
TUBB3-204ENST00000554116 INO80Q9ULG1 1556 aaPredicted RBP18.92■□□□□ 0.62
TUBB3-204ENST00000554116 ZMYM3Q14202 1370 aa18.91■□□□□ 0.62
TUBB3-204ENST00000554116 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
TUBB3-204ENST00000554116 IQSEC2Q5JU85 1478 aa18.9■□□□□ 0.62
TUBB3-204ENST00000554116 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
TUBB3-204ENST00000554116 SPAG9O60271 1321 aaKnown RBP18.9■□□□□ 0.62
TUBB3-204ENST00000554116 NPATQ14207 1427 aa18.9■□□□□ 0.62
TUBB3-204ENST00000554116 CAMSAP1Q5T5Y3 1602 aa18.89■□□□□ 0.61
TUBB3-204ENST00000554116 CLTCQ00610 1675 aaKnown RBP18.89■□□□□ 0.61
TUBB3-204ENST00000554116 ESF1Q9H501 851 aaKnown RBP18.88■□□□□ 0.61
TUBB3-204ENST00000554116 ZNF644Q9H582 1327 aaPredicted RBP18.86■□□□□ 0.61
TUBB3-204ENST00000554116 A2MP01023 1474 aa18.85■□□□□ 0.61
TUBB3-204ENST00000554116 PTPRKQ15262 1439 aa18.85■□□□□ 0.61
TUBB3-204ENST00000554116 CFDP1Q9UEE9 299 aaPredicted RBP18.85■□□□□ 0.61
TUBB3-204ENST00000554116 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
TUBB3-204ENST00000554116 ZNF142P52746 1687 aaPredicted RBP18.83■□□□□ 0.61
TUBB3-204ENST00000554116 NCKAP5LQ9HCH0 1330 aa18.83■□□□□ 0.61
TUBB3-204ENST00000554116 TIAM1Q13009 1591 aa18.83■□□□□ 0.6
TUBB3-204ENST00000554116 PLEKHH2Q8IVE3 1493 aa18.83■□□□□ 0.6
TUBB3-204ENST00000554116 CCNB3Q8WWL7 1395 aa18.82■□□□□ 0.6
TUBB3-204ENST00000554116 MYO3AQ8NEV4 1616 aa18.82■□□□□ 0.6
TUBB3-204ENST00000554116 TCOF1Q13428 1488 aaKnown RBP18.8■□□□□ 0.6
TUBB3-204ENST00000554116 ADGBQ8N7X0 1667 aa18.79■□□□□ 0.6
TUBB3-204ENST00000554116 GGT6Q6P531 493 aa18.79■□□□□ 0.6
TUBB3-204ENST00000554116 CEP170BQ9Y4F5 1589 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-204ENST00000554116 MTUS2Q5JR59 1369 aa18.79■□□□□ 0.6
TUBB3-204ENST00000554116 ZNF335Q9H4Z2 1342 aaPredicted RBP18.78■□□□□ 0.6
TUBB3-204ENST00000554116 PLA2R1Q13018 1463 aa18.77■□□□□ 0.6
TUBB3-204ENST00000554116 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
TUBB3-204ENST00000554116 RTEL1-TNFRSF6BF6WH68 1400 aa18.74■□□□□ 0.59
TUBB3-204ENST00000554116 CEP162Q5TB80 1403 aa18.74■□□□□ 0.59
TUBB3-204ENST00000554116 DHX29Q7Z478 1369 aaKnown RBP18.73■□□□□ 0.59
TUBB3-204ENST00000554116 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
TUBB3-204ENST00000554116 DNMT1P26358 1616 aaKnown RBP18.73■□□□□ 0.59
TUBB3-204ENST00000554116 PKD2Q13563 968 aa18.72■□□□□ 0.59
TUBB3-204ENST00000554116 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
TUBB3-204ENST00000554116 FBXO31Q5XUX0 539 aaPredicted RBP18.7■□□□□ 0.58
TUBB3-204ENST00000554116 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms