RNA–Protein interactions for RNA: ENST00000554035.5

RDH11-206, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-206ENST00000554035 RIMBP3Q9UFD9 1639 aa13.44□□□□□ -0.26
RDH11-206ENST00000554035 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
RDH11-206ENST00000554035 WDR7Q9Y4E6 1490 aa13.42□□□□□ -0.26
RDH11-206ENST00000554035 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.41□□□□□ -0.26
RDH11-206ENST00000554035 PREX2Q70Z35 1606 aa13.4□□□□□ -0.26
RDH11-206ENST00000554035 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
RDH11-206ENST00000554035 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
RDH11-206ENST00000554035 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
RDH11-206ENST00000554035 TTC37Q6PGP7 1564 aa13.39□□□□□ -0.27
RDH11-206ENST00000554035 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
RDH11-206ENST00000554035 CAMSAP2Q08AD1 1489 aa13.38□□□□□ -0.27
RDH11-206ENST00000554035 ITGAEP38570 1179 aa13.37□□□□□ -0.27
RDH11-206ENST00000554035 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
RDH11-206ENST00000554035 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
RDH11-206ENST00000554035 PTPRKQ15262 1439 aa13.37□□□□□ -0.27
RDH11-206ENST00000554035 AKNAQ7Z591 1439 aa13.37□□□□□ -0.27
RDH11-206ENST00000554035 MYO5CQ9NQX4 1742 aa13.36□□□□□ -0.27
RDH11-206ENST00000554035 SETD5Q9C0A6 1442 aa13.36□□□□□ -0.27
RDH11-206ENST00000554035 CDC42BPBQ9Y5S2 1711 aa13.36□□□□□ -0.27
RDH11-206ENST00000554035 HOXD11P31277 338 aaPredicted RBP13.35□□□□□ -0.27
RDH11-206ENST00000554035 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
RDH11-206ENST00000554035 PLCH2O75038 1416 aa13.35□□□□□ -0.27
RDH11-206ENST00000554035 DAPK1P53355 1430 aa13.35□□□□□ -0.27
RDH11-206ENST00000554035 ABCA9Q8IUA7 1624 aa13.35□□□□□ -0.27
RDH11-206ENST00000554035 MAPKBP1O60336 1514 aa13.34□□□□□ -0.27
RDH11-206ENST00000554035 ABCC5O15440 1437 aa13.34□□□□□ -0.27
RDH11-206ENST00000554035 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
RDH11-206ENST00000554035 ROCK1Q13464 1354 aa13.33□□□□□ -0.27
RDH11-206ENST00000554035 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
RDH11-206ENST00000554035 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
RDH11-206ENST00000554035 PLEKHH2Q8IVE3 1493 aa13.33□□□□□ -0.28
RDH11-206ENST00000554035 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
RDH11-206ENST00000554035 ARHGEF5Q12774 1597 aa13.32□□□□□ -0.28
RDH11-206ENST00000554035 CYB5RLQ6IPT4 315 aa13.32□□□□□ -0.28
RDH11-206ENST00000554035 ARHGAP5Q13017 1502 aa13.32□□□□□ -0.28
RDH11-206ENST00000554035 SAMD9LQ8IVG5 1584 aa13.32□□□□□ -0.28
RDH11-206ENST00000554035 RAB3GAP2Q9H2M9 1393 aa13.32□□□□□ -0.28
RDH11-206ENST00000554035 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
RDH11-206ENST00000554035 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
RDH11-206ENST00000554035 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
RDH11-206ENST00000554035 RSPH4AQ5TD94 716 aa13.31□□□□□ -0.28
RDH11-206ENST00000554035 CROCC2H7BZ55 1655 aa13.31□□□□□ -0.28
RDH11-206ENST00000554035 NAIPQ13075 1403 aa13.3□□□□□ -0.28
RDH11-206ENST00000554035 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
RDH11-206ENST00000554035 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
RDH11-206ENST00000554035 GCC2Q8IWJ2 1684 aa13.29□□□□□ -0.28
RDH11-206ENST00000554035 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
RDH11-206ENST00000554035 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
RDH11-206ENST00000554035 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
RDH11-206ENST00000554035 ACIN1Q9UKV3 1341 aaKnown RBP13.27□□□□□ -0.29
RDH11-206ENST00000554035 CCDC141Q6ZP82 1450 aa13.27□□□□□ -0.29
RDH11-206ENST00000554035 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.29
RDH11-206ENST00000554035 ABCC1P33527 1531 aa13.26□□□□□ -0.29
RDH11-206ENST00000554035 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
RDH11-206ENST00000554035 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
RDH11-206ENST00000554035 GLI2P10070 1586 aa13.25□□□□□ -0.29
RDH11-206ENST00000554035 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
RDH11-206ENST00000554035 SYCP2Q9BX26 1530 aa13.24□□□□□ -0.29
RDH11-206ENST00000554035 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
RDH11-206ENST00000554035 CHIC2Q9UKJ5 165 aa13.24□□□□□ -0.29
RDH11-206ENST00000554035 FANCAO15360 1455 aa13.23□□□□□ -0.29
RDH11-206ENST00000554035 C9orf84Q5VXU9 1444 aa13.23□□□□□ -0.29
RDH11-206ENST00000554035 ANKRD30AQ9BXX3 1397 aa13.23□□□□□ -0.29
RDH11-206ENST00000554035 HNRNPMP52272 730 aaKnown RBP eCLIP13.23□□□□□ -0.29
RDH11-206ENST00000554035 RNF216Q9NWF9 866 aaPredicted RBP13.23□□□□□ -0.29
RDH11-206ENST00000554035 CFAP74Q9C0B2 1584 aa13.23□□□□□ -0.29
RDH11-206ENST00000554035 CD109Q6YHK3 1445 aa13.22□□□□□ -0.29
RDH11-206ENST00000554035 TSPY4P0CV99 314 aa13.22□□□□□ -0.29
RDH11-206ENST00000554035 TSPY10P0CW01 314 aa13.22□□□□□ -0.29
RDH11-206ENST00000554035 ARHGEF12Q9NZN5 1544 aa13.22□□□□□ -0.29
RDH11-206ENST00000554035 RRP7BPQ9NSQ0 103 aa13.21□□□□□ -0.29
RDH11-206ENST00000554035 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
RDH11-206ENST00000554035 PLXNC1O60486 1568 aa13.19□□□□□ -0.3
RDH11-206ENST00000554035 DIP2BQ9P265 1576 aa13.19□□□□□ -0.3
RDH11-206ENST00000554035 NEO1Q92859 1461 aa13.18□□□□□ -0.3
RDH11-206ENST00000554035 RTEL1-TNFRSF6BF6WH68 1400 aa13.18□□□□□ -0.3
RDH11-206ENST00000554035 KDM6BO15054 1643 aa13.17□□□□□ -0.3
RDH11-206ENST00000554035 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
RDH11-206ENST00000554035 ADGRL1O94910 1474 aa13.16□□□□□ -0.3
RDH11-206ENST00000554035 SCAPERQ9BY12 1400 aa13.15□□□□□ -0.3
RDH11-206ENST00000554035 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
RDH11-206ENST00000554035 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
RDH11-206ENST00000554035 INO80Q9ULG1 1556 aaPredicted RBP13.12□□□□□ -0.31
RDH11-206ENST00000554035 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
RDH11-206ENST00000554035 ZFYVE16Q7Z3T8 1539 aa13.12□□□□□ -0.31
RDH11-206ENST00000554035 DUOX2Q9NRD8 1548 aa13.12□□□□□ -0.31
RDH11-206ENST00000554035 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
RDH11-206ENST00000554035 FAM69CQ0P6D2 419 aa13.11□□□□□ -0.31
RDH11-206ENST00000554035 POGZQ7Z3K3 1410 aa13.11□□□□□ -0.31
RDH11-206ENST00000554035 KDM5CP41229 1560 aa13.11□□□□□ -0.31
RDH11-206ENST00000554035 KDM5DQ9BY66 1539 aa13.1□□□□□ -0.31
RDH11-206ENST00000554035 AFAP1Q8N556 730 aa13.1□□□□□ -0.31
RDH11-206ENST00000554035 ERBINQ96RT1 1412 aa13.1□□□□□ -0.31
RDH11-206ENST00000554035 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
RDH11-206ENST00000554035 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
RDH11-206ENST00000554035 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
RDH11-206ENST00000554035 TRIM52Q96A61 297 aa13.08□□□□□ -0.32
RDH11-206ENST00000554035 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
RDH11-206ENST00000554035 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
RDH11-206ENST00000554035 PPRC1Q5VV67 1664 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms