RNA–Protein interactions for RNA: ENST00000554014.6

NUMB-208, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 1,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-208ENST00000554014 CDK11AQ9UQ88 783 aaPredicted RBP14.58□□□□□ -0.07
NUMB-208ENST00000554014 CDC42BPBQ9Y5S2 1711 aa14.58□□□□□ -0.08
NUMB-208ENST00000554014 PREX2Q70Z35 1606 aa14.58□□□□□ -0.08
NUMB-208ENST00000554014 KCNH8Q96L42 1107 aa14.58□□□□□ -0.08
NUMB-208ENST00000554014 RNF216Q9NWF9 866 aaPredicted RBP14.58□□□□□ -0.08
NUMB-208ENST00000554014 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
NUMB-208ENST00000554014 NCOA2Q15596 1464 aa14.56□□□□□ -0.08
NUMB-208ENST00000554014 ITSN2Q9NZM3 1697 aa14.56□□□□□ -0.08
NUMB-208ENST00000554014 APLP2Q06481 763 aa14.54□□□□□ -0.08
NUMB-208ENST00000554014 FAM69CQ0P6D2 419 aa14.54□□□□□ -0.08
NUMB-208ENST00000554014 CD109Q6YHK3 1445 aa14.52□□□□□ -0.09
NUMB-208ENST00000554014 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.09
NUMB-208ENST00000554014 GPATCH8Q9UKJ3 1502 aaKnown RBP14.51□□□□□ -0.09
NUMB-208ENST00000554014 TRHP20396 242 aaPredicted RBP14.5□□□□□ -0.09
NUMB-208ENST00000554014 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
NUMB-208ENST00000554014 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
NUMB-208ENST00000554014 PLCH2O75038 1416 aa14.48□□□□□ -0.09
NUMB-208ENST00000554014 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
NUMB-208ENST00000554014 SAMD9LQ8IVG5 1584 aa14.48□□□□□ -0.09
NUMB-208ENST00000554014 ARHGAP5Q13017 1502 aa14.48□□□□□ -0.09
NUMB-208ENST00000554014 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
NUMB-208ENST00000554014 FANCAO15360 1455 aa14.46□□□□□ -0.09
NUMB-208ENST00000554014 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.1
NUMB-208ENST00000554014 TEX14Q8IWB6 1497 aa14.45□□□□□ -0.1
NUMB-208ENST00000554014 ABCC1P33527 1531 aa14.44□□□□□ -0.1
NUMB-208ENST00000554014 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
NUMB-208ENST00000554014 NEO1Q92859 1461 aa14.43□□□□□ -0.1
NUMB-208ENST00000554014 RICTORQ6R327 1708 aa14.42□□□□□ -0.1
NUMB-208ENST00000554014 FGD6Q6ZV73 1430 aa14.42□□□□□ -0.1
NUMB-208ENST00000554014 KCNA4P22459 653 aa14.41□□□□□ -0.1
NUMB-208ENST00000554014 FRMPD1Q5SYB0 1578 aa14.41□□□□□ -0.1
NUMB-208ENST00000554014 CAMSAP2Q08AD1 1489 aa14.41□□□□□ -0.1
NUMB-208ENST00000554014 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
NUMB-208ENST00000554014 SYCP2Q9BX26 1530 aa14.4□□□□□ -0.1
NUMB-208ENST00000554014 ARHGEF12Q9NZN5 1544 aa14.4□□□□□ -0.1
NUMB-208ENST00000554014 MIA2Q96PC5 1412 aa14.4□□□□□ -0.1
NUMB-208ENST00000554014 AKNAQ7Z591 1439 aa14.39□□□□□ -0.11
NUMB-208ENST00000554014 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
NUMB-208ENST00000554014 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
NUMB-208ENST00000554014 CROCC2H7BZ55 1655 aa14.38□□□□□ -0.11
NUMB-208ENST00000554014 KDM6BO15054 1643 aa14.38□□□□□ -0.11
NUMB-208ENST00000554014 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
NUMB-208ENST00000554014 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
NUMB-208ENST00000554014 ZNF644Q9H582 1327 aaPredicted RBP14.37□□□□□ -0.11
NUMB-208ENST00000554014 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
NUMB-208ENST00000554014 EFCAB2Q5VUJ9 269 aa14.35□□□□□ -0.11
NUMB-208ENST00000554014 RRBP1Q9P2E9 1410 aaKnown RBP14.35□□□□□ -0.11
NUMB-208ENST00000554014 ARHGEF5Q12774 1597 aa14.35□□□□□ -0.11
NUMB-208ENST00000554014 PLEKHH2Q8IVE3 1493 aa14.34□□□□□ -0.11
NUMB-208ENST00000554014 MBD5Q9P267 1494 aa14.34□□□□□ -0.11
NUMB-208ENST00000554014 KDM5CP41229 1560 aa14.34□□□□□ -0.11
NUMB-208ENST00000554014 DNMT1P26358 1616 aaKnown RBP14.34□□□□□ -0.11
NUMB-208ENST00000554014 POGZQ7Z3K3 1410 aa14.34□□□□□ -0.11
NUMB-208ENST00000554014 ZNF777Q9ULD5 760 aaPredicted RBP14.33□□□□□ -0.12
NUMB-208ENST00000554014 SCAPERQ9BY12 1400 aa14.33□□□□□ -0.12
NUMB-208ENST00000554014 KIAA1107Q9UPP5 1409 aa14.33□□□□□ -0.12
NUMB-208ENST00000554014 ZMYM4Q5VZL5 1548 aa14.32□□□□□ -0.12
NUMB-208ENST00000554014 TRAPPC8Q9Y2L5 1435 aa14.32□□□□□ -0.12
NUMB-208ENST00000554014 INO80Q9ULG1 1556 aaPredicted RBP14.31□□□□□ -0.12
NUMB-208ENST00000554014 DENND4BO75064 1496 aaPredicted RBP14.31□□□□□ -0.12
NUMB-208ENST00000554014 HECW2Q9P2P5 1572 aa14.3□□□□□ -0.12
NUMB-208ENST00000554014 ZNF518AQ6AHZ1 1483 aa14.3□□□□□ -0.12
NUMB-208ENST00000554014 KIDINS220Q9ULH0 1771 aa14.3□□□□□ -0.12
NUMB-208ENST00000554014 CCDC141Q6ZP82 1450 aa14.29□□□□□ -0.12
NUMB-208ENST00000554014 ZFYVE16Q7Z3T8 1539 aa14.29□□□□□ -0.12
NUMB-208ENST00000554014 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
NUMB-208ENST00000554014 ADGBQ8N7X0 1667 aa14.28□□□□□ -0.12
NUMB-208ENST00000554014 MAST1Q9Y2H9 1570 aa14.28□□□□□ -0.12
NUMB-208ENST00000554014 ABCA6Q8N139 1617 aa14.27□□□□□ -0.12
NUMB-208ENST00000554014 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.27□□□□□ -0.13
NUMB-208ENST00000554014 RAPGEF3O95398 923 aa14.27□□□□□ -0.13
NUMB-208ENST00000554014 DAPK1P53355 1430 aa14.26□□□□□ -0.13
NUMB-208ENST00000554014 ARHGEF40Q8TER5 1519 aa14.26□□□□□ -0.13
NUMB-208ENST00000554014 ABCC5O15440 1437 aa14.26□□□□□ -0.13
NUMB-208ENST00000554014 ATP7AQ04656 1500 aa14.26□□□□□ -0.13
NUMB-208ENST00000554014 SHANK2Q9UPX8 1470 aa14.25□□□□□ -0.13
NUMB-208ENST00000554014 FAM50AQ14320 339 aaKnown RBP14.24□□□□□ -0.13
NUMB-208ENST00000554014 AFAP1Q8N556 730 aa14.24□□□□□ -0.13
NUMB-208ENST00000554014 DIP2CQ9Y2E4 1556 aa14.24□□□□□ -0.13
NUMB-208ENST00000554014 PTPRKQ15262 1439 aa14.24□□□□□ -0.13
NUMB-208ENST00000554014 SIGLEC1Q9BZZ2 1709 aa14.24□□□□□ -0.13
NUMB-208ENST00000554014 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
NUMB-208ENST00000554014 MLH3Q9UHC1 1453 aa14.23□□□□□ -0.13
NUMB-208ENST00000554014 C9orf84Q5VXU9 1444 aa14.22□□□□□ -0.13
NUMB-208ENST00000554014 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
NUMB-208ENST00000554014 MAGI2Q86UL8 1455 aa14.2□□□□□ -0.14
NUMB-208ENST00000554014 ADGRL2O95490 1459 aa14.2□□□□□ -0.14
NUMB-208ENST00000554014 RTEL1-TNFRSF6BF6WH68 1400 aa14.19□□□□□ -0.14
NUMB-208ENST00000554014 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
NUMB-208ENST00000554014 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
NUMB-208ENST00000554014 REREQ9P2R6 1566 aa14.17□□□□□ -0.14
NUMB-208ENST00000554014 RSPH4AQ5TD94 716 aa14.16□□□□□ -0.14
NUMB-208ENST00000554014 ITGAEP38570 1179 aa14.15□□□□□ -0.14
NUMB-208ENST00000554014 NCOA1Q15788 1441 aa14.14□□□□□ -0.15
NUMB-208ENST00000554014 BCORL1Q5H9F3 1711 aa14.13□□□□□ -0.15
NUMB-208ENST00000554014 CHIC2Q9UKJ5 165 aa14.13□□□□□ -0.15
NUMB-208ENST00000554014 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
NUMB-208ENST00000554014 TSPY4P0CV99 314 aa14.12□□□□□ -0.15
NUMB-208ENST00000554014 TSPY10P0CW01 314 aa14.12□□□□□ -0.15
NUMB-208ENST00000554014 EIF2AK4Q9P2K8 1649 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms