RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 FANCAO15360 1455 aa18.39■□□□□ 0.53
PSMC6-204ENST00000553798 EHBP1L1Q8N3D4 1523 aa18.39■□□□□ 0.53
PSMC6-204ENST00000553798 MYO5CQ9NQX4 1742 aa18.37■□□□□ 0.53
PSMC6-204ENST00000553798 EFCAB2Q5VUJ9 269 aa18.36■□□□□ 0.53
PSMC6-204ENST00000553798 LRRC9Q6ZRR7 1453 aa18.36■□□□□ 0.53
PSMC6-204ENST00000553798 AKNAQ7Z591 1439 aa18.36■□□□□ 0.53
PSMC6-204ENST00000553798 CFAP74Q9C0B2 1584 aa18.36■□□□□ 0.53
PSMC6-204ENST00000553798 GPATCH8Q9UKJ3 1502 aaKnown RBP18.33■□□□□ 0.53
PSMC6-204ENST00000553798 KANK4Q5T7N3 995 aaPredicted RBP18.33■□□□□ 0.52
PSMC6-204ENST00000553798 PREX2Q70Z35 1606 aa18.33■□□□□ 0.52
PSMC6-204ENST00000553798 CDC42BPBQ9Y5S2 1711 aa18.32■□□□□ 0.52
PSMC6-204ENST00000553798 APLP2Q06481 763 aa18.32■□□□□ 0.52
PSMC6-204ENST00000553798 CDC42BPAQ5VT25 1732 aa18.32■□□□□ 0.52
PSMC6-204ENST00000553798 ARHGAP5Q13017 1502 aa18.31■□□□□ 0.52
PSMC6-204ENST00000553798 CCNB3Q8WWL7 1395 aa18.3■□□□□ 0.52
PSMC6-204ENST00000553798 SUPT6HQ7KZ85 1726 aaKnown RBP18.29■□□□□ 0.52
PSMC6-204ENST00000553798 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
PSMC6-204ENST00000553798 NCOA2Q15596 1464 aa18.29■□□□□ 0.52
PSMC6-204ENST00000553798 RAPGEF3O95398 923 aa18.28■□□□□ 0.52
PSMC6-204ENST00000553798 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
PSMC6-204ENST00000553798 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
PSMC6-204ENST00000553798 CFDP1Q9UEE9 299 aaPredicted RBP18.26■□□□□ 0.51
PSMC6-204ENST00000553798 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
PSMC6-204ENST00000553798 RICTORQ6R327 1708 aa18.24■□□□□ 0.51
PSMC6-204ENST00000553798 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
PSMC6-204ENST00000553798 ITSN2Q9NZM3 1697 aa18.22■□□□□ 0.51
PSMC6-204ENST00000553798 ABCC1P33527 1531 aa18.22■□□□□ 0.51
PSMC6-204ENST00000553798 KIAA1107Q9UPP5 1409 aa18.22■□□□□ 0.51
PSMC6-204ENST00000553798 ARHGEF12Q9NZN5 1544 aa18.21■□□□□ 0.51
PSMC6-204ENST00000553798 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
PSMC6-204ENST00000553798 ZMYM4Q5VZL5 1548 aa18.2■□□□□ 0.5
PSMC6-204ENST00000553798 PLEKHH2Q8IVE3 1493 aa18.2■□□□□ 0.5
PSMC6-204ENST00000553798 ZNF777Q9ULD5 760 aaPredicted RBP18.19■□□□□ 0.5
PSMC6-204ENST00000553798 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
PSMC6-204ENST00000553798 MAGI2Q86UL8 1455 aa18.19■□□□□ 0.5
PSMC6-204ENST00000553798 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
PSMC6-204ENST00000553798 KDM5CP41229 1560 aa18.17■□□□□ 0.5
PSMC6-204ENST00000553798 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
PSMC6-204ENST00000553798 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
PSMC6-204ENST00000553798 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
PSMC6-204ENST00000553798 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
PSMC6-204ENST00000553798 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.49
PSMC6-204ENST00000553798 MBD5Q9P267 1494 aa18.14■□□□□ 0.49
PSMC6-204ENST00000553798 SYCP2Q9BX26 1530 aa18.13■□□□□ 0.49
PSMC6-204ENST00000553798 MLH3Q9UHC1 1453 aa18.13■□□□□ 0.49
PSMC6-204ENST00000553798 CAMSAP2Q08AD1 1489 aa18.11■□□□□ 0.49
PSMC6-204ENST00000553798 ZFYVE16Q7Z3T8 1539 aa18.11■□□□□ 0.49
PSMC6-204ENST00000553798 ARHGEF40Q8TER5 1519 aa18.11■□□□□ 0.49
PSMC6-204ENST00000553798 YEATS2Q9ULM3 1422 aa18.1■□□□□ 0.49
PSMC6-204ENST00000553798 RSPH4AQ5TD94 716 aa18.1■□□□□ 0.49
PSMC6-204ENST00000553798 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
PSMC6-204ENST00000553798 FGD6Q6ZV73 1430 aa18.07■□□□□ 0.48
PSMC6-204ENST00000553798 ATP10AO60312 1499 aa18.06■□□□□ 0.48
PSMC6-204ENST00000553798 ARHGEF5Q12774 1597 aa18.05■□□□□ 0.48
PSMC6-204ENST00000553798 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
PSMC6-204ENST00000553798 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
PSMC6-204ENST00000553798 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
PSMC6-204ENST00000553798 CCDC141Q6ZP82 1450 aa18.04■□□□□ 0.48
PSMC6-204ENST00000553798 RTEL1-TNFRSF6BF6WH68 1400 aa18.04■□□□□ 0.48
PSMC6-204ENST00000553798 PTPN23Q9H3S7 1636 aa18.03■□□□□ 0.48
PSMC6-204ENST00000553798 INO80Q9ULG1 1556 aaPredicted RBP18.02■□□□□ 0.48
PSMC6-204ENST00000553798 DIP2CQ9Y2E4 1556 aa18.02■□□□□ 0.48
PSMC6-204ENST00000553798 REREQ9P2R6 1566 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 C9orf84Q5VXU9 1444 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 ATP7AQ04656 1500 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 ABCA6Q8N139 1617 aa18.01■□□□□ 0.47
PSMC6-204ENST00000553798 PPARGC1BQ86YN6 1023 aaKnown RBP17.99■□□□□ 0.47
PSMC6-204ENST00000553798 TSPY4P0CV99 314 aa17.98■□□□□ 0.47
PSMC6-204ENST00000553798 TSPY10P0CW01 314 aa17.98■□□□□ 0.47
PSMC6-204ENST00000553798 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
PSMC6-204ENST00000553798 ARID4BQ4LE39 1312 aaPredicted RBP17.97■□□□□ 0.47
PSMC6-204ENST00000553798 AGLP35573 1532 aa17.96■□□□□ 0.47
PSMC6-204ENST00000553798 ABCC5O15440 1437 aa17.96■□□□□ 0.47
PSMC6-204ENST00000553798 MAST1Q9Y2H9 1570 aa17.96■□□□□ 0.46
PSMC6-204ENST00000553798 BCORL1Q5H9F3 1711 aa17.94■□□□□ 0.46
PSMC6-204ENST00000553798 DNMT1P26358 1616 aaKnown RBP17.94■□□□□ 0.46
PSMC6-204ENST00000553798 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.93■□□□□ 0.46
PSMC6-204ENST00000553798 DAPK1P53355 1430 aa17.93■□□□□ 0.46
PSMC6-204ENST00000553798 A2MP01023 1474 aa17.93■□□□□ 0.46
PSMC6-204ENST00000553798 SHANK2Q9UPX8 1470 aa17.93■□□□□ 0.46
PSMC6-204ENST00000553798 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
PSMC6-204ENST00000553798 PLXNC1O60486 1568 aa17.92■□□□□ 0.46
PSMC6-204ENST00000553798 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
PSMC6-204ENST00000553798 FAM50AQ14320 339 aaKnown RBP17.91■□□□□ 0.46
PSMC6-204ENST00000553798 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
PSMC6-204ENST00000553798 CROCC2H7BZ55 1655 aa17.9■□□□□ 0.46
PSMC6-204ENST00000553798 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
PSMC6-204ENST00000553798 MLECQ14165 292 aa17.85■□□□□ 0.45
PSMC6-204ENST00000553798 ADGRL2O95490 1459 aa17.84■□□□□ 0.45
PSMC6-204ENST00000553798 MADDQ8WXG6 1647 aa17.83■□□□□ 0.45
PSMC6-204ENST00000553798 NCOA1Q15788 1441 aa17.83■□□□□ 0.45
PSMC6-204ENST00000553798 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.45
PSMC6-204ENST00000553798 PTPRKQ15262 1439 aa17.82■□□□□ 0.44
PSMC6-204ENST00000553798 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
PSMC6-204ENST00000553798 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
PSMC6-204ENST00000553798 PTPRMP28827 1452 aa17.82■□□□□ 0.44
PSMC6-204ENST00000553798 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
PSMC6-204ENST00000553798 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms