RNA–Protein interactions for RNA: ENST00000552915.5

CNOT2-241, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-241ENST00000552915 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
CNOT2-241ENST00000552915 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
CNOT2-241ENST00000552915 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
CNOT2-241ENST00000552915 ARID3CA6NKF2 412 aa18.97■□□□□ 0.63
CNOT2-241ENST00000552915 PPARGC1BQ86YN6 1023 aaKnown RBP18.97■□□□□ 0.63
CNOT2-241ENST00000552915 ABCA8O94911 1581 aa18.96■□□□□ 0.63
CNOT2-241ENST00000552915 TIAM1Q13009 1591 aa18.95■□□□□ 0.62
CNOT2-241ENST00000552915 FBXO3Q9UK99 471 aa18.93■□□□□ 0.62
CNOT2-241ENST00000552915 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
CNOT2-241ENST00000552915 PRR29P0C7W0 189 aa18.92■□□□□ 0.62
CNOT2-241ENST00000552915 UACAQ9BZF9 1416 aa18.91■□□□□ 0.62
CNOT2-241ENST00000552915 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
CNOT2-241ENST00000552915 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
CNOT2-241ENST00000552915 ABCC2Q92887 1545 aa18.9■□□□□ 0.62
CNOT2-241ENST00000552915 EPRSP07814 1512 aaKnown RBP18.89■□□□□ 0.61
CNOT2-241ENST00000552915 ADCY10Q96PN6 1610 aa18.87■□□□□ 0.61
CNOT2-241ENST00000552915 ZCCHC11Q5TAX3 1644 aaKnown RBP18.85■□□□□ 0.61
CNOT2-241ENST00000552915 FXR2P51116 673 aaKnown RBP eCLIP18.84■□□□□ 0.61
CNOT2-241ENST00000552915 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
CNOT2-241ENST00000552915 PIP4P2Q8N4L2 257 aa18.82■□□□□ 0.6
CNOT2-241ENST00000552915 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
CNOT2-241ENST00000552915 EHBP1L1Q8N3D4 1523 aa18.8■□□□□ 0.6
CNOT2-241ENST00000552915 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
CNOT2-241ENST00000552915 KANK4Q5T7N3 995 aaPredicted RBP18.8■□□□□ 0.6
CNOT2-241ENST00000552915 MTUS2Q5JR59 1369 aa18.8■□□□□ 0.6
CNOT2-241ENST00000552915 MAGI3Q5TCQ9 1506 aa18.79■□□□□ 0.6
CNOT2-241ENST00000552915 ATP10BO94823 1461 aa18.78■□□□□ 0.6
CNOT2-241ENST00000552915 VASPP50552 380 aaPredicted RBP18.77■□□□□ 0.6
CNOT2-241ENST00000552915 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
CNOT2-241ENST00000552915 SUPT6HQ7KZ85 1726 aaKnown RBP18.77■□□□□ 0.59
CNOT2-241ENST00000552915 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
CNOT2-241ENST00000552915 CREBZFQ9NS37 354 aa18.75■□□□□ 0.59
CNOT2-241ENST00000552915 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
CNOT2-241ENST00000552915 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
CNOT2-241ENST00000552915 KIF14Q15058 1648 aa18.71■□□□□ 0.58
CNOT2-241ENST00000552915 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
CNOT2-241ENST00000552915 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
CNOT2-241ENST00000552915 TROQ12816 1431 aaPredicted RBP18.69■□□□□ 0.58
CNOT2-241ENST00000552915 PLEKHD1A6NEE1 506 aa18.68■□□□□ 0.58
CNOT2-241ENST00000552915 MIER1Q8N108 512 aa18.68■□□□□ 0.58
CNOT2-241ENST00000552915 NCOA2Q15596 1464 aa18.65■□□□□ 0.58
CNOT2-241ENST00000552915 PLCD3Q8N3E9 789 aa18.64■□□□□ 0.57
CNOT2-241ENST00000552915 ASXL2Q76L83 1435 aa18.62■□□□□ 0.57
CNOT2-241ENST00000552915 WDR7Q9Y4E6 1490 aa18.62■□□□□ 0.57
CNOT2-241ENST00000552915 ITSN2Q9NZM3 1697 aa18.62■□□□□ 0.57
CNOT2-241ENST00000552915 KCNH8Q96L42 1107 aa18.61■□□□□ 0.57
CNOT2-241ENST00000552915 PHLDB1Q86UU1 1377 aa18.6■□□□□ 0.57
CNOT2-241ENST00000552915 TTC37Q6PGP7 1564 aa18.59■□□□□ 0.57
CNOT2-241ENST00000552915 CDC42BPAQ5VT25 1732 aa18.58■□□□□ 0.57
CNOT2-241ENST00000552915 MNX1P50219 401 aaPredicted RBP18.58■□□□□ 0.56
CNOT2-241ENST00000552915 MYO5CQ9NQX4 1742 aa18.57■□□□□ 0.56
CNOT2-241ENST00000552915 CCNB3Q8WWL7 1395 aa18.57■□□□□ 0.56
CNOT2-241ENST00000552915 IFNLR1Q8IU57 520 aaPredicted RBP18.56■□□□□ 0.56
CNOT2-241ENST00000552915 MAPKBP1O60336 1514 aa18.55■□□□□ 0.56
CNOT2-241ENST00000552915 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.55■□□□□ 0.563e-8■■■□□ 17.7
CNOT2-241ENST00000552915 TRIM26Q12899 539 aaPredicted RBP18.55■□□□□ 0.56
CNOT2-241ENST00000552915 MYOM3Q5VTT5 1437 aa18.55■□□□□ 0.56
CNOT2-241ENST00000552915 PREX2Q70Z35 1606 aa18.52■□□□□ 0.56
CNOT2-241ENST00000552915 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
CNOT2-241ENST00000552915 ABCC10Q5T3U5 1492 aa18.52■□□□□ 0.56
CNOT2-241ENST00000552915 FGD6Q6ZV73 1430 aa18.51■□□□□ 0.55
CNOT2-241ENST00000552915 POTEHQ6S545 545 aa18.51■□□□□ 0.55
CNOT2-241ENST00000552915 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
CNOT2-241ENST00000552915 FARP1Q9Y4F1 1045 aaPredicted RBP18.5■□□□□ 0.55
CNOT2-241ENST00000552915 ABCA9Q8IUA7 1624 aa18.49■□□□□ 0.55
CNOT2-241ENST00000552915 FAM50AQ14320 339 aaKnown RBP18.49■□□□□ 0.55
CNOT2-241ENST00000552915 PCGF6Q9BYE7 350 aa18.49■□□□□ 0.55
CNOT2-241ENST00000552915 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
CNOT2-241ENST00000552915 ARHGAP5Q13017 1502 aa18.48■□□□□ 0.55
CNOT2-241ENST00000552915 GPATCH8Q9UKJ3 1502 aaKnown RBP18.48■□□□□ 0.55
CNOT2-241ENST00000552915 RRBP1Q9P2E9 1410 aaKnown RBP18.48■□□□□ 0.55
CNOT2-241ENST00000552915 ZNF777Q9ULD5 760 aaPredicted RBP18.46■□□□□ 0.55
CNOT2-241ENST00000552915 DIP2BQ9P265 1576 aa18.46■□□□□ 0.55
CNOT2-241ENST00000552915 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
CNOT2-241ENST00000552915 MIA2Q96PC5 1412 aa18.43■□□□□ 0.54
CNOT2-241ENST00000552915 ITGAEP38570 1179 aa18.43■□□□□ 0.54
CNOT2-241ENST00000552915 CAMSAP2Q08AD1 1489 aa18.43■□□□□ 0.54
CNOT2-241ENST00000552915 TSPOAP1O95153 1857 aa18.43■□□□□ 0.54
CNOT2-241ENST00000552915 KIF13AQ9H1H9 1805 aa18.42■□□□□ 0.54
CNOT2-241ENST00000552915 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
CNOT2-241ENST00000552915 SAMD9LQ8IVG5 1584 aa18.41■□□□□ 0.54
CNOT2-241ENST00000552915 TCOF1Q13428 1488 aaKnown RBP18.4■□□□□ 0.54
CNOT2-241ENST00000552915 MAP3K4Q9Y6R4 1608 aa18.4■□□□□ 0.54
CNOT2-241ENST00000552915 GLI2P10070 1586 aa18.38■□□□□ 0.53
CNOT2-241ENST00000552915 PLCH2O75038 1416 aa18.38■□□□□ 0.53
CNOT2-241ENST00000552915 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
CNOT2-241ENST00000552915 FAM69CQ0P6D2 419 aa18.37■□□□□ 0.53
CNOT2-241ENST00000552915 ZNF644Q9H582 1327 aaPredicted RBP18.37■□□□□ 0.53
CNOT2-241ENST00000552915 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
CNOT2-241ENST00000552915 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
CNOT2-241ENST00000552915 CROCC2H7BZ55 1655 aa18.35■□□□□ 0.53
CNOT2-241ENST00000552915 DNMT1P26358 1616 aaKnown RBP18.35■□□□□ 0.53
CNOT2-241ENST00000552915 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
CNOT2-241ENST00000552915 ARAP3Q8WWN8 1544 aa18.34■□□□□ 0.53
CNOT2-241ENST00000552915 FANCAO15360 1455 aa18.34■□□□□ 0.53
CNOT2-241ENST00000552915 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
CNOT2-241ENST00000552915 ABCC1P33527 1531 aa18.32■□□□□ 0.52
CNOT2-241ENST00000552915 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.31■□□□□ 0.523e-6■■□□□ 12.8
CNOT2-241ENST00000552915 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
CNOT2-241ENST00000552915 ADGBQ8N7X0 1667 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms