RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
MMP19-209ENST00000552872 PTPN23Q9H3S7 1636 aa15.3■□□□□ 0.04
MMP19-209ENST00000552872 MAPKBP1O60336 1514 aa15.3■□□□□ 0.04
MMP19-209ENST00000552872 CHIC2Q9UKJ5 165 aa15.3■□□□□ 0.04
MMP19-209ENST00000552872 ARHGAP5Q13017 1502 aa15.3■□□□□ 0.04
MMP19-209ENST00000552872 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
MMP19-209ENST00000552872 MYO5CQ9NQX4 1742 aa15.29■□□□□ 0.04
MMP19-209ENST00000552872 HNRNPMP52272 730 aaKnown RBP eCLIP15.29■□□□□ 0.04
MMP19-209ENST00000552872 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
MMP19-209ENST00000552872 PREX2Q70Z35 1606 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 DIP2BQ9P265 1576 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 CAMSAP2Q08AD1 1489 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 ABCA9Q8IUA7 1624 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
MMP19-209ENST00000552872 KIF13AQ9H1H9 1805 aa15.25■□□□□ 0.03
MMP19-209ENST00000552872 PTPRKQ15262 1439 aa15.24■□□□□ 0.03
MMP19-209ENST00000552872 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
MMP19-209ENST00000552872 PLCH2O75038 1416 aa15.23■□□□□ 0.03
MMP19-209ENST00000552872 ACIN1Q9UKV3 1341 aaKnown RBP15.22■□□□□ 0.03
MMP19-209ENST00000552872 FANCAO15360 1455 aa15.21■□□□□ 0.03
MMP19-209ENST00000552872 SYCP2Q9BX26 1530 aa15.21■□□□□ 0.03
MMP19-209ENST00000552872 RRP7BPQ9NSQ0 103 aa15.2■□□□□ 0.02
MMP19-209ENST00000552872 MIA2Q96PC5 1412 aa15.2■□□□□ 0.02
MMP19-209ENST00000552872 ARHGEF12Q9NZN5 1544 aa15.2■□□□□ 0.02
MMP19-209ENST00000552872 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
MMP19-209ENST00000552872 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
MMP19-209ENST00000552872 MAP3K4Q9Y6R4 1608 aa15.19■□□□□ 0.02
MMP19-209ENST00000552872 TCOF1Q13428 1488 aaKnown RBP15.17■□□□□ 0.02
MMP19-209ENST00000552872 RAPGEF3O95398 923 aa15.17■□□□□ 0.02
MMP19-209ENST00000552872 ABCC5O15440 1437 aa15.16■□□□□ 0.02
MMP19-209ENST00000552872 PPRC1Q5VV67 1664 aaKnown RBP15.16■□□□□ 0.02
MMP19-209ENST00000552872 ERICH6Q7L0X2 663 aa15.16■□□□□ 0.02
MMP19-209ENST00000552872 MYT1LQ9UL68 1186 aa15.16■□□□□ 0.02
MMP19-209ENST00000552872 DAPK1P53355 1430 aa15.15■□□□□ 0.02
MMP19-209ENST00000552872 TRAPPC8Q9Y2L5 1435 aa15.15■□□□□ 0.02
MMP19-209ENST00000552872 NEUROD1Q13562 356 aa15.14■□□□□ 0.01
MMP19-209ENST00000552872 ADGRL1O94910 1474 aa15.14■□□□□ 0.01
MMP19-209ENST00000552872 AKNAQ7Z591 1439 aa15.14■□□□□ 0.01
MMP19-209ENST00000552872 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
MMP19-209ENST00000552872 MBD5Q9P267 1494 aa15.13■□□□□ 0.01
MMP19-209ENST00000552872 GLI2P10070 1586 aa15.13■□□□□ 0.01
MMP19-209ENST00000552872 DNMT1P26358 1616 aaKnown RBP15.13■□□□□ 0.01
MMP19-209ENST00000552872 ABCC1P33527 1531 aa15.13■□□□□ 0.01
MMP19-209ENST00000552872 GTF3C3Q9Y5Q9 886 aa15.1■□□□□ 0.01
MMP19-209ENST00000552872 TSPY4P0CV99 314 aa15.09■□□□□ 0.01
MMP19-209ENST00000552872 TSPY10P0CW01 314 aa15.09■□□□□ 0.01
MMP19-209ENST00000552872 KDM6BO15054 1643 aa15.08■□□□□ 0.01
MMP19-209ENST00000552872 CROCC2H7BZ55 1655 aa15.08■□□□□ 0.01
MMP19-209ENST00000552872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
MMP19-209ENST00000552872 C9orf84Q5VXU9 1444 aa15.08■□□□□ 0
MMP19-209ENST00000552872 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0
MMP19-209ENST00000552872 BCL11AQ9H165 835 aa15.07■□□□□ 0
MMP19-209ENST00000552872 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
MMP19-209ENST00000552872 ARAP3Q8WWN8 1544 aa15.07■□□□□ 0
MMP19-209ENST00000552872 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
MMP19-209ENST00000552872 SPAG9O60271 1321 aaKnown RBP15.05■□□□□ -0
MMP19-209ENST00000552872 KIAA1107Q9UPP5 1409 aa15.04■□□□□ -0
MMP19-209ENST00000552872 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
MMP19-209ENST00000552872 PLEKHH2Q8IVE3 1493 aa15.03■□□□□ -0
MMP19-209ENST00000552872 NAIPQ13075 1403 aa15.03■□□□□ -0
MMP19-209ENST00000552872 CFAP74Q9C0B2 1584 aa15.02■□□□□ -0
MMP19-209ENST00000552872 NEO1Q92859 1461 aa15.02■□□□□ -0
MMP19-209ENST00000552872 NCOA1Q15788 1441 aa15.02□□□□□ -0.01
MMP19-209ENST00000552872 POGZQ7Z3K3 1410 aa15.02□□□□□ -0.01
MMP19-209ENST00000552872 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
MMP19-209ENST00000552872 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
MMP19-209ENST00000552872 ADGBQ8N7X0 1667 aa15.01□□□□□ -0.01
MMP19-209ENST00000552872 TEX14Q8IWB6 1497 aa15.01□□□□□ -0.01
MMP19-209ENST00000552872 KIF15Q9NS87 1388 aa15□□□□□ -0.01
MMP19-209ENST00000552872 RICTORQ6R327 1708 aa15□□□□□ -0.01
MMP19-209ENST00000552872 FRMPD1Q5SYB0 1578 aa15□□□□□ -0.01
MMP19-209ENST00000552872 CENPBP07199 599 aaPredicted RBP15□□□□□ -0.01
MMP19-209ENST00000552872 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
MMP19-209ENST00000552872 ZFYVE16Q7Z3T8 1539 aa14.99□□□□□ -0.01
MMP19-209ENST00000552872 ZNF518AQ6AHZ1 1483 aa14.99□□□□□ -0.01
MMP19-209ENST00000552872 HFM1A2PYH4 1435 aa14.99□□□□□ -0.01
MMP19-209ENST00000552872 TRIM52Q96A61 297 aa14.98□□□□□ -0.01
MMP19-209ENST00000552872 YEATS2Q9ULM3 1422 aa14.98□□□□□ -0.01
MMP19-209ENST00000552872 KIDINS220Q9ULH0 1771 aa14.98□□□□□ -0.01
MMP19-209ENST00000552872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.98□□□□□ -0.01
MMP19-209ENST00000552872 ATP7AQ04656 1500 aa14.97□□□□□ -0.01
MMP19-209ENST00000552872 RSPH4AQ5TD94 716 aa14.96□□□□□ -0.01
MMP19-209ENST00000552872 CCER1Q8TC90 406 aaPredicted RBP14.96□□□□□ -0.01
MMP19-209ENST00000552872 SHANK2Q9UPX8 1470 aa14.96□□□□□ -0.01
MMP19-209ENST00000552872 GCC2Q8IWJ2 1684 aa14.96□□□□□ -0.02
MMP19-209ENST00000552872 INO80Q9ULG1 1556 aaPredicted RBP14.95□□□□□ -0.02
MMP19-209ENST00000552872 FOXD1Q16676 465 aa14.95□□□□□ -0.02
MMP19-209ENST00000552872 ROCK1Q13464 1354 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 ANKRD50Q9ULJ7 1429 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 ADGRL2O95490 1459 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 ABCA6Q8N139 1617 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 KDM5CP41229 1560 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 HECW2Q9P2P5 1572 aa14.94□□□□□ -0.02
MMP19-209ENST00000552872 MAST1Q9Y2H9 1570 aa14.92□□□□□ -0.02
MMP19-209ENST00000552872 KIF3BO15066 747 aa14.91□□□□□ -0.02
MMP19-209ENST00000552872 MLECQ14165 292 aa14.9□□□□□ -0.02
MMP19-209ENST00000552872 PLXNC1O60486 1568 aa14.9□□□□□ -0.02
MMP19-209ENST00000552872 SIGLEC1Q9BZZ2 1709 aa14.9□□□□□ -0.02
MMP19-209ENST00000552872 GGT6Q6P531 493 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms