RNA–Protein interactions for RNA: ENST00000552818.1

PFKM-229, Transcript of phosphofructokinase, muscle, humanhuman

TSL 2

Gene PFKM, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-229ENST00000552818 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
PFKM-229ENST00000552818 PTPN23Q9H3S7 1636 aa14.68□□□□□ -0.06
PFKM-229ENST00000552818 ITSN2Q9NZM3 1697 aa14.68□□□□□ -0.06
PFKM-229ENST00000552818 ABCC10Q5T3U5 1492 aa14.67□□□□□ -0.06
PFKM-229ENST00000552818 TCOF1Q13428 1488 aaKnown RBP14.66□□□□□ -0.06
PFKM-229ENST00000552818 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
PFKM-229ENST00000552818 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
PFKM-229ENST00000552818 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
PFKM-229ENST00000552818 CDC42BPBQ9Y5S2 1711 aa14.64□□□□□ -0.07
PFKM-229ENST00000552818 TTC37Q6PGP7 1564 aa14.64□□□□□ -0.07
PFKM-229ENST00000552818 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.07
PFKM-229ENST00000552818 PREX2Q70Z35 1606 aa14.62□□□□□ -0.07
PFKM-229ENST00000552818 GPATCH8Q9UKJ3 1502 aaKnown RBP14.6□□□□□ -0.07
PFKM-229ENST00000552818 CROCC2H7BZ55 1655 aa14.59□□□□□ -0.07
PFKM-229ENST00000552818 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.59□□□□□ -0.07
PFKM-229ENST00000552818 PTPRKQ15262 1439 aa14.58□□□□□ -0.07
PFKM-229ENST00000552818 MIA2Q96PC5 1412 aa14.58□□□□□ -0.07
PFKM-229ENST00000552818 MYO5CQ9NQX4 1742 aa14.58□□□□□ -0.07
PFKM-229ENST00000552818 DNMT1P26358 1616 aaKnown RBP14.58□□□□□ -0.08
PFKM-229ENST00000552818 HNRNPUL2Q1KMD3 747 aaKnown RBP14.56□□□□□ -0.08
PFKM-229ENST00000552818 GCC2Q8IWJ2 1684 aa14.55□□□□□ -0.08
PFKM-229ENST00000552818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
PFKM-229ENST00000552818 CDK11AQ9UQ88 783 aaPredicted RBP14.54□□□□□ -0.08
PFKM-229ENST00000552818 CAMSAP2Q08AD1 1489 aa14.54□□□□□ -0.08
PFKM-229ENST00000552818 SAMD9LQ8IVG5 1584 aa14.54□□□□□ -0.08
PFKM-229ENST00000552818 ABCA9Q8IUA7 1624 aa14.52□□□□□ -0.08
PFKM-229ENST00000552818 WDR7Q9Y4E6 1490 aa14.52□□□□□ -0.08
PFKM-229ENST00000552818 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.09
PFKM-229ENST00000552818 ADGBQ8N7X0 1667 aa14.51□□□□□ -0.09
PFKM-229ENST00000552818 FAM50AQ14320 339 aaKnown RBP14.5□□□□□ -0.09
PFKM-229ENST00000552818 ZNF644Q9H582 1327 aaPredicted RBP14.48□□□□□ -0.09
PFKM-229ENST00000552818 ASXL2Q76L83 1435 aa14.48□□□□□ -0.09
PFKM-229ENST00000552818 KDM6BO15054 1643 aa14.48□□□□□ -0.09
PFKM-229ENST00000552818 HRCP23327 699 aa14.47□□□□□ -0.09
PFKM-229ENST00000552818 DAPK1P53355 1430 aa14.47□□□□□ -0.09
PFKM-229ENST00000552818 ARHGEF5Q12774 1597 aa14.47□□□□□ -0.09
PFKM-229ENST00000552818 ABCC5O15440 1437 aa14.46□□□□□ -0.09
PFKM-229ENST00000552818 ARAP3Q8WWN8 1544 aa14.46□□□□□ -0.1
PFKM-229ENST00000552818 MAPKBP1O60336 1514 aa14.45□□□□□ -0.1
PFKM-229ENST00000552818 HFM1A2PYH4 1435 aa14.44□□□□□ -0.1
PFKM-229ENST00000552818 AKNAQ7Z591 1439 aa14.44□□□□□ -0.1
PFKM-229ENST00000552818 ITGAEP38570 1179 aa14.44□□□□□ -0.1
PFKM-229ENST00000552818 MBD5Q9P267 1494 aa14.44□□□□□ -0.1
PFKM-229ENST00000552818 NAIPQ13075 1403 aa14.43□□□□□ -0.1
PFKM-229ENST00000552818 RAB3GAP2Q9H2M9 1393 aa14.43□□□□□ -0.1
PFKM-229ENST00000552818 ABCC1P33527 1531 aa14.42□□□□□ -0.1
PFKM-229ENST00000552818 ARHGAP5Q13017 1502 aa14.42□□□□□ -0.1
PFKM-229ENST00000552818 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
PFKM-229ENST00000552818 SETD5Q9C0A6 1442 aa14.41□□□□□ -0.1
PFKM-229ENST00000552818 ADGRL2O95490 1459 aa14.41□□□□□ -0.1
PFKM-229ENST00000552818 SHANK2Q9UPX8 1470 aa14.41□□□□□ -0.1
PFKM-229ENST00000552818 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
PFKM-229ENST00000552818 PLCH2O75038 1416 aa14.41□□□□□ -0.1
PFKM-229ENST00000552818 CFDP1Q9UEE9 299 aaPredicted RBP14.4□□□□□ -0.1
PFKM-229ENST00000552818 MAST1Q9Y2H9 1570 aa14.39□□□□□ -0.11
PFKM-229ENST00000552818 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
PFKM-229ENST00000552818 MAP3K4Q9Y6R4 1608 aa14.39□□□□□ -0.11
PFKM-229ENST00000552818 KCNH8Q96L42 1107 aa14.37□□□□□ -0.11
PFKM-229ENST00000552818 ATF5Q9Y2D1 282 aaPredicted RBP14.37□□□□□ -0.11
PFKM-229ENST00000552818 KIF13AQ9H1H9 1805 aa14.36□□□□□ -0.11
PFKM-229ENST00000552818 ROCK1Q13464 1354 aa14.36□□□□□ -0.11
PFKM-229ENST00000552818 DIP2BQ9P265 1576 aa14.36□□□□□ -0.11
PFKM-229ENST00000552818 PPRC1Q5VV67 1664 aaKnown RBP14.36□□□□□ -0.11
PFKM-229ENST00000552818 GLI2P10070 1586 aa14.35□□□□□ -0.11
PFKM-229ENST00000552818 CCDC141Q6ZP82 1450 aa14.35□□□□□ -0.11
PFKM-229ENST00000552818 CYB5RLQ6IPT4 315 aa14.34□□□□□ -0.11
PFKM-229ENST00000552818 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
PFKM-229ENST00000552818 KIAA1107Q9UPP5 1409 aa14.33□□□□□ -0.11
PFKM-229ENST00000552818 NCOA1Q15788 1441 aa14.32□□□□□ -0.12
PFKM-229ENST00000552818 C9orf84Q5VXU9 1444 aa14.32□□□□□ -0.12
PFKM-229ENST00000552818 DENND4BO75064 1496 aaPredicted RBP14.32□□□□□ -0.12
PFKM-229ENST00000552818 PLEKHH2Q8IVE3 1493 aa14.32□□□□□ -0.12
PFKM-229ENST00000552818 ZNF777Q9ULD5 760 aaPredicted RBP14.32□□□□□ -0.12
PFKM-229ENST00000552818 CFAP74Q9C0B2 1584 aa14.31□□□□□ -0.12
PFKM-229ENST00000552818 INO80Q9ULG1 1556 aaPredicted RBP14.31□□□□□ -0.12
PFKM-229ENST00000552818 CHIC2Q9UKJ5 165 aa14.31□□□□□ -0.12
PFKM-229ENST00000552818 FANCAO15360 1455 aa14.31□□□□□ -0.12
PFKM-229ENST00000552818 CCER1Q8TC90 406 aaPredicted RBP14.3□□□□□ -0.12
PFKM-229ENST00000552818 TRAPPC8Q9Y2L5 1435 aa14.3□□□□□ -0.12
PFKM-229ENST00000552818 RRP7BPQ9NSQ0 103 aa14.29□□□□□ -0.12
PFKM-229ENST00000552818 ZFYVE16Q7Z3T8 1539 aa14.29□□□□□ -0.12
PFKM-229ENST00000552818 HNRNPMP52272 730 aaKnown RBP eCLIP14.28□□□□□ -0.12
PFKM-229ENST00000552818 TSPOAP1O95153 1857 aa14.27□□□□□ -0.13
PFKM-229ENST00000552818 KIDINS220Q9ULH0 1771 aa14.27□□□□□ -0.13
PFKM-229ENST00000552818 RICTORQ6R327 1708 aa14.27□□□□□ -0.13
PFKM-229ENST00000552818 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
PFKM-229ENST00000552818 KDM5CP41229 1560 aa14.26□□□□□ -0.13
PFKM-229ENST00000552818 CD109Q6YHK3 1445 aa14.25□□□□□ -0.13
PFKM-229ENST00000552818 ADGRL1O94910 1474 aa14.25□□□□□ -0.13
PFKM-229ENST00000552818 EFCAB2Q5VUJ9 269 aa14.24□□□□□ -0.13
PFKM-229ENST00000552818 UNC13BO14795 1591 aa14.24□□□□□ -0.13
PFKM-229ENST00000552818 FRMPD1Q5SYB0 1578 aa14.23□□□□□ -0.13
PFKM-229ENST00000552818 KDM5DQ9BY66 1539 aa14.23□□□□□ -0.13
PFKM-229ENST00000552818 PZPP20742 1482 aa14.23□□□□□ -0.13
PFKM-229ENST00000552818 ANKRD30AQ9BXX3 1397 aa14.22□□□□□ -0.13
PFKM-229ENST00000552818 ATP7AQ04656 1500 aa14.22□□□□□ -0.13
PFKM-229ENST00000552818 NEO1Q92859 1461 aa14.21□□□□□ -0.13
PFKM-229ENST00000552818 KIF15Q9NS87 1388 aa14.21□□□□□ -0.14
PFKM-229ENST00000552818 CLSPNQ9HAW4 1339 aa14.2□□□□□ -0.14
PFKM-229ENST00000552818 ZEB1P37275 1124 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms