RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 FANCAO15360 1455 aa14.3□□□□□ -0.12
TMEM116-217ENST00000552801 CDK11AQ9UQ88 783 aaPredicted RBP14.3□□□□□ -0.12
TMEM116-217ENST00000552801 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
TMEM116-217ENST00000552801 AKNAQ7Z591 1439 aa14.29□□□□□ -0.12
TMEM116-217ENST00000552801 POGZQ7Z3K3 1410 aa14.28□□□□□ -0.12
TMEM116-217ENST00000552801 PTPRMP28827 1452 aa14.28□□□□□ -0.12
TMEM116-217ENST00000552801 FMN1Q68DA7 1419 aa14.27□□□□□ -0.13
TMEM116-217ENST00000552801 ADAMTSL3P82987 1691 aa14.26□□□□□ -0.13
TMEM116-217ENST00000552801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.26□□□□□ -0.13
TMEM116-217ENST00000552801 BCORL1Q5H9F3 1711 aa14.26□□□□□ -0.13
TMEM116-217ENST00000552801 ARHGEF40Q8TER5 1519 aa14.26□□□□□ -0.13
TMEM116-217ENST00000552801 FRMPD1Q5SYB0 1578 aa14.25□□□□□ -0.13
TMEM116-217ENST00000552801 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
TMEM116-217ENST00000552801 CDK13Q14004 1512 aaKnown RBP14.25□□□□□ -0.13
TMEM116-217ENST00000552801 TTC37Q6PGP7 1564 aa14.25□□□□□ -0.13
TMEM116-217ENST00000552801 MYT1LQ9UL68 1186 aa14.24□□□□□ -0.13
TMEM116-217ENST00000552801 RICTORQ6R327 1708 aa14.24□□□□□ -0.13
TMEM116-217ENST00000552801 MADDQ8WXG6 1647 aa14.24□□□□□ -0.13
TMEM116-217ENST00000552801 ZFYVE16Q7Z3T8 1539 aa14.23□□□□□ -0.13
TMEM116-217ENST00000552801 RIMS1Q86UR5 1692 aaKnown RBP14.22□□□□□ -0.13
TMEM116-217ENST00000552801 CLIP1P30622 1438 aa14.21□□□□□ -0.13
TMEM116-217ENST00000552801 MYO5CQ9NQX4 1742 aa14.21□□□□□ -0.14
TMEM116-217ENST00000552801 MLECQ14165 292 aa14.21□□□□□ -0.14
TMEM116-217ENST00000552801 EFCAB2Q5VUJ9 269 aa14.21□□□□□ -0.14
TMEM116-217ENST00000552801 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
TMEM116-217ENST00000552801 MAGI2Q86UL8 1455 aa14.2□□□□□ -0.14
TMEM116-217ENST00000552801 PLCH2O75038 1416 aa14.19□□□□□ -0.14
TMEM116-217ENST00000552801 KIF14Q15058 1648 aa14.19□□□□□ -0.14
TMEM116-217ENST00000552801 ZMYM4Q5VZL5 1548 aa14.19□□□□□ -0.14
TMEM116-217ENST00000552801 PCF11O94913 1555 aaKnown RBP14.17□□□□□ -0.14
TMEM116-217ENST00000552801 ARHGAP5Q13017 1502 aa14.16□□□□□ -0.14
TMEM116-217ENST00000552801 ARHGAP35Q9NRY4 1499 aa14.16□□□□□ -0.14
TMEM116-217ENST00000552801 FOXD4L1Q9NU39 408 aa14.16□□□□□ -0.14
TMEM116-217ENST00000552801 U3KPZ7 1027 aaPredicted RBP14.16□□□□□ -0.14
TMEM116-217ENST00000552801 FER1L4A9Z1Z3 1794 aa14.15□□□□□ -0.14
TMEM116-217ENST00000552801 YEATS2Q9ULM3 1422 aa14.15□□□□□ -0.14
TMEM116-217ENST00000552801 C1QBPQ07021 282 aaKnown RBP14.14□□□□□ -0.15
TMEM116-217ENST00000552801 FBXO41Q8TF61 875 aa14.13□□□□□ -0.15
TMEM116-217ENST00000552801 TROQ12816 1431 aaPredicted RBP14.13□□□□□ -0.15
TMEM116-217ENST00000552801 ATP10AO60312 1499 aa14.12□□□□□ -0.15
TMEM116-217ENST00000552801 ESF1Q9H501 851 aaKnown RBP14.12□□□□□ -0.15
TMEM116-217ENST00000552801 C9orf84Q5VXU9 1444 aa14.12□□□□□ -0.15
TMEM116-217ENST00000552801 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
TMEM116-217ENST00000552801 CCDC18Q5T9S5 1454 aa14.11□□□□□ -0.15
TMEM116-217ENST00000552801 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
TMEM116-217ENST00000552801 HSPA2P54652 639 aa14.09□□□□□ -0.15
TMEM116-217ENST00000552801 ZBTB22O15209 634 aa14.08□□□□□ -0.16
TMEM116-217ENST00000552801 AFAP1Q8N556 730 aa14.07□□□□□ -0.16
TMEM116-217ENST00000552801 CACNB1Q02641 598 aaPredicted RBP14.06□□□□□ -0.16
TMEM116-217ENST00000552801 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
TMEM116-217ENST00000552801 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
TMEM116-217ENST00000552801 SIGLEC1Q9BZZ2 1709 aa14.05□□□□□ -0.16
TMEM116-217ENST00000552801 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-217ENST00000552801 ZNF777Q9ULD5 760 aaPredicted RBP14.04□□□□□ -0.16
TMEM116-217ENST00000552801 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
TMEM116-217ENST00000552801 PREX2Q70Z35 1606 aa14.03□□□□□ -0.16
TMEM116-217ENST00000552801 ARHGEF12Q9NZN5 1544 aa14.03□□□□□ -0.16
TMEM116-217ENST00000552801 PREX1Q8TCU6 1659 aa14.03□□□□□ -0.16
TMEM116-217ENST00000552801 KDM5CP41229 1560 aa14.02□□□□□ -0.16
TMEM116-217ENST00000552801 CEBPAP49715 358 aaPredicted RBP14.01□□□□□ -0.17
TMEM116-217ENST00000552801 FYCO1Q9BQS8 1478 aa14.01□□□□□ -0.17
TMEM116-217ENST00000552801 DIP2CQ9Y2E4 1556 aa14□□□□□ -0.17
TMEM116-217ENST00000552801 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
TMEM116-217ENST00000552801 UHRF1BP1Q6BDS2 1440 aa14□□□□□ -0.17
TMEM116-217ENST00000552801 ABCC1P33527 1531 aa13.99□□□□□ -0.17
TMEM116-217ENST00000552801 MLH3Q9UHC1 1453 aa13.99□□□□□ -0.17
TMEM116-217ENST00000552801 CDC42BPAQ5VT25 1732 aa13.98□□□□□ -0.17
TMEM116-217ENST00000552801 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
TMEM116-217ENST00000552801 ABCA6Q8N139 1617 aa13.98□□□□□ -0.17
TMEM116-217ENST00000552801 REREQ9P2R6 1566 aa13.97□□□□□ -0.17
TMEM116-217ENST00000552801 CERKQ8TCT0 537 aa13.96□□□□□ -0.17
TMEM116-217ENST00000552801 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.17
TMEM116-217ENST00000552801 CFDP1Q9UEE9 299 aaPredicted RBP13.96□□□□□ -0.18
TMEM116-217ENST00000552801 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.18
TMEM116-217ENST00000552801 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.18
TMEM116-217ENST00000552801 CCNB3Q8WWL7 1395 aa13.95□□□□□ -0.18
TMEM116-217ENST00000552801 CNTLNQ9NXG0 1405 aa13.94□□□□□ -0.18
TMEM116-217ENST00000552801 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
TMEM116-217ENST00000552801 C3P01024 1663 aa13.93□□□□□ -0.18
TMEM116-217ENST00000552801 AGLP35573 1532 aa13.93□□□□□ -0.18
TMEM116-217ENST00000552801 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
TMEM116-217ENST00000552801 SYCP2Q9BX26 1530 aa13.92□□□□□ -0.18
TMEM116-217ENST00000552801 KIDINS220Q9ULH0 1771 aa13.92□□□□□ -0.18
TMEM116-217ENST00000552801 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
TMEM116-217ENST00000552801 SUPT6HQ7KZ85 1726 aaKnown RBP13.91□□□□□ -0.18
TMEM116-217ENST00000552801 SAMD9LQ8IVG5 1584 aa13.9□□□□□ -0.18
TMEM116-217ENST00000552801 APLP2Q06481 763 aa13.9□□□□□ -0.18
TMEM116-217ENST00000552801 GPATCH8Q9UKJ3 1502 aaKnown RBP13.89□□□□□ -0.19
TMEM116-217ENST00000552801 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
TMEM116-217ENST00000552801 STRCQ7RTU9 1775 aa13.87□□□□□ -0.19
TMEM116-217ENST00000552801 KIAA1107Q9UPP5 1409 aa13.86□□□□□ -0.19
TMEM116-217ENST00000552801 GGT6Q6P531 493 aa13.86□□□□□ -0.19
TMEM116-217ENST00000552801 MROH2AA6NES4 1674 aa13.86□□□□□ -0.19
TMEM116-217ENST00000552801 A2MP01023 1474 aa13.85□□□□□ -0.19
TMEM116-217ENST00000552801 EHBP1L1Q8N3D4 1523 aa13.85□□□□□ -0.19
TMEM116-217ENST00000552801 ZMYM3Q14202 1370 aa13.83□□□□□ -0.19
TMEM116-217ENST00000552801 CLTCQ00610 1675 aaKnown RBP13.83□□□□□ -0.19
TMEM116-217ENST00000552801 ADGBQ8N7X0 1667 aa13.83□□□□□ -0.19
TMEM116-217ENST00000552801 PTPRTO14522 1441 aa13.83□□□□□ -0.2
TMEM116-217ENST00000552801 NPATQ14207 1427 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms