RNA–Protein interactions for RNA: ENST00000552566.1

SMARCC2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-212ENST00000552566 MYT1LQ9UL68 1186 aa22.37■■□□□ 1.17
SMARCC2-212ENST00000552566 RICTORQ6R327 1708 aa22.36■■□□□ 1.17
SMARCC2-212ENST00000552566 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
SMARCC2-212ENST00000552566 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
SMARCC2-212ENST00000552566 CASKIN1Q8WXD9 1431 aa22.35■■□□□ 1.17
SMARCC2-212ENST00000552566 KIF14Q15058 1648 aa22.35■■□□□ 1.17
SMARCC2-212ENST00000552566 AFAP1Q8N556 730 aa22.34■■□□□ 1.17
SMARCC2-212ENST00000552566 BCORL1Q5H9F3 1711 aa22.34■■□□□ 1.17
SMARCC2-212ENST00000552566 ARHGAP5Q13017 1502 aa22.33■■□□□ 1.17
SMARCC2-212ENST00000552566 MADDQ8WXG6 1647 aa22.33■■□□□ 1.17
SMARCC2-212ENST00000552566 CCDC18Q5T9S5 1454 aa22.3■■□□□ 1.16
SMARCC2-212ENST00000552566 PCF11O94913 1555 aaKnown RBP22.29■■□□□ 1.16
SMARCC2-212ENST00000552566 ATP10AO60312 1499 aa22.28■■□□□ 1.16
SMARCC2-212ENST00000552566 ZNF518AQ6AHZ1 1483 aa22.26■■□□□ 1.15
SMARCC2-212ENST00000552566 C9orf84Q5VXU9 1444 aa22.25■■□□□ 1.15
SMARCC2-212ENST00000552566 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
SMARCC2-212ENST00000552566 ZNF777Q9ULD5 760 aaPredicted RBP22.24■■□□□ 1.15
SMARCC2-212ENST00000552566 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
SMARCC2-212ENST00000552566 HSPA2P54652 639 aa22.23■■□□□ 1.15
SMARCC2-212ENST00000552566 RIMS1Q86UR5 1692 aaKnown RBP22.22■■□□□ 1.15
SMARCC2-212ENST00000552566 LMTK3Q96Q04 1460 aa22.21■■□□□ 1.15
SMARCC2-212ENST00000552566 LOC105371045A0A1W2PR82 267 aa22.2■■□□□ 1.14
SMARCC2-212ENST00000552566 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
SMARCC2-212ENST00000552566 TRAPPC8Q9Y2L5 1435 aa22.19■■□□□ 1.14
SMARCC2-212ENST00000552566 SIGLEC1Q9BZZ2 1709 aa22.19■■□□□ 1.14
SMARCC2-212ENST00000552566 CEBPAP49715 358 aaPredicted RBP22.18■■□□□ 1.14
SMARCC2-212ENST00000552566 ARHGEF12Q9NZN5 1544 aa22.16■■□□□ 1.14
SMARCC2-212ENST00000552566 KDM5CP41229 1560 aa22.15■■□□□ 1.14
SMARCC2-212ENST00000552566 MLH3Q9UHC1 1453 aa22.13■■□□□ 1.13
SMARCC2-212ENST00000552566 HNRNPMP52272 730 aaKnown RBP eCLIP22.12■■□□□ 1.13
SMARCC2-212ENST00000552566 ESF1Q9H501 851 aaKnown RBP22.12■■□□□ 1.13
SMARCC2-212ENST00000552566 CFDP1Q9UEE9 299 aaPredicted RBP22.12■■□□□ 1.13
SMARCC2-212ENST00000552566 MTUS2Q5JR59 1369 aa22.12■■□□□ 1.13
SMARCC2-212ENST00000552566 ABCC1P33527 1531 aa22.11■■□□□ 1.13
SMARCC2-212ENST00000552566 PREX2Q70Z35 1606 aa22.11■■□□□ 1.13
SMARCC2-212ENST00000552566 GPATCH8Q9UKJ3 1502 aaKnown RBP22.1■■□□□ 1.13
SMARCC2-212ENST00000552566 CCNB3Q8WWL7 1395 aa22.1■■□□□ 1.13
SMARCC2-212ENST00000552566 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
SMARCC2-212ENST00000552566 DIP2CQ9Y2E4 1556 aa22.08■■□□□ 1.13
SMARCC2-212ENST00000552566 SPAG9O60271 1321 aaKnown RBP22.06■■□□□ 1.12
SMARCC2-212ENST00000552566 FBXO41Q8TF61 875 aa22.06■■□□□ 1.12
SMARCC2-212ENST00000552566 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
SMARCC2-212ENST00000552566 FER1L4A9Z1Z3 1794 aa22.05■■□□□ 1.12
SMARCC2-212ENST00000552566 ABCA6Q8N139 1617 aa22.04■■□□□ 1.12
SMARCC2-212ENST00000552566 SYCP2Q9BX26 1530 aa22.02■■□□□ 1.12
SMARCC2-212ENST00000552566 ITSN2Q9NZM3 1697 aa22.01■■□□□ 1.11
SMARCC2-212ENST00000552566 SAMD9LQ8IVG5 1584 aa22■■□□□ 1.11
SMARCC2-212ENST00000552566 REREQ9P2R6 1566 aa22■■□□□ 1.11
SMARCC2-212ENST00000552566 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
SMARCC2-212ENST00000552566 CDC42BPAQ5VT25 1732 aa22■■□□□ 1.11
SMARCC2-212ENST00000552566 KIAA1107Q9UPP5 1409 aa21.99■■□□□ 1.11
SMARCC2-212ENST00000552566 AGLP35573 1532 aa21.99■■□□□ 1.11
SMARCC2-212ENST00000552566 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
SMARCC2-212ENST00000552566 PLEKHH2Q8IVE3 1493 aa21.98■■□□□ 1.11
SMARCC2-212ENST00000552566 KIDINS220Q9ULH0 1771 aa21.94■■□□□ 1.1
SMARCC2-212ENST00000552566 EHBP1L1Q8N3D4 1523 aa21.92■■□□□ 1.1
SMARCC2-212ENST00000552566 CNTLNQ9NXG0 1405 aa21.92■■□□□ 1.1
SMARCC2-212ENST00000552566 GGT6Q6P531 493 aa21.92■■□□□ 1.1
SMARCC2-212ENST00000552566 ATP7AQ04656 1500 aa21.9■■□□□ 1.1
SMARCC2-212ENST00000552566 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
SMARCC2-212ENST00000552566 DMRT2Q9Y5R5 561 aa21.9■■□□□ 1.1
SMARCC2-212ENST00000552566 A2MP01023 1474 aa21.9■■□□□ 1.1
SMARCC2-212ENST00000552566 TIAM1Q13009 1591 aa21.88■■□□□ 1.09
SMARCC2-212ENST00000552566 PREX1Q8TCU6 1659 aa21.88■■□□□ 1.09
SMARCC2-212ENST00000552566 ZMYM3Q14202 1370 aa21.87■■□□□ 1.09
SMARCC2-212ENST00000552566 NCOA2Q15596 1464 aa21.84■■□□□ 1.09
SMARCC2-212ENST00000552566 MBD5Q9P267 1494 aa21.84■■□□□ 1.09
SMARCC2-212ENST00000552566 INO80Q9ULG1 1556 aaPredicted RBP21.82■■□□□ 1.08
SMARCC2-212ENST00000552566 C3P01024 1663 aa21.82■■□□□ 1.08
SMARCC2-212ENST00000552566 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
SMARCC2-212ENST00000552566 RTEL1-TNFRSF6BF6WH68 1400 aa21.8■■□□□ 1.08
SMARCC2-212ENST00000552566 NPATQ14207 1427 aa21.8■■□□□ 1.08
SMARCC2-212ENST00000552566 SUPT6HQ7KZ85 1726 aaKnown RBP21.79■■□□□ 1.08
SMARCC2-212ENST00000552566 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
SMARCC2-212ENST00000552566 DHX29Q7Z478 1369 aaKnown RBP21.78■■□□□ 1.08
SMARCC2-212ENST00000552566 KIF3BO15066 747 aa21.78■■□□□ 1.08
SMARCC2-212ENST00000552566 RSPH4AQ5TD94 716 aa21.78■■□□□ 1.08
SMARCC2-212ENST00000552566 PPP6R1Q9UPN7 881 aa21.78■■□□□ 1.08
SMARCC2-212ENST00000552566 CAMSAP2Q08AD1 1489 aa21.77■■□□□ 1.07
SMARCC2-212ENST00000552566 CCDC141Q6ZP82 1450 aa21.77■■□□□ 1.07
SMARCC2-212ENST00000552566 TSPY4P0CV99 314 aa21.76■■□□□ 1.07
SMARCC2-212ENST00000552566 TSPY10P0CW01 314 aa21.76■■□□□ 1.07
SMARCC2-212ENST00000552566 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
SMARCC2-212ENST00000552566 PTPRTO14522 1441 aa21.74■■□□□ 1.07
SMARCC2-212ENST00000552566 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
SMARCC2-212ENST00000552566 NCKAP5LQ9HCH0 1330 aa21.73■■□□□ 1.07
SMARCC2-212ENST00000552566 PTPRKQ15262 1439 aa21.72■■□□□ 1.07
SMARCC2-212ENST00000552566 NCOA1Q15788 1441 aa21.72■■□□□ 1.07
SMARCC2-212ENST00000552566 STRCQ7RTU9 1775 aa21.7■■□□□ 1.06
SMARCC2-212ENST00000552566 CLTCQ00610 1675 aaKnown RBP21.69■■□□□ 1.06
SMARCC2-212ENST00000552566 WASHC2CQ9Y4E1 1318 aa21.69■■□□□ 1.06
SMARCC2-212ENST00000552566 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
SMARCC2-212ENST00000552566 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
SMARCC2-212ENST00000552566 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
SMARCC2-212ENST00000552566 ADGBQ8N7X0 1667 aa21.68■■□□□ 1.06
SMARCC2-212ENST00000552566 CAMSAP1Q5T5Y3 1602 aa21.67■■□□□ 1.06
SMARCC2-212ENST00000552566 APLP2Q06481 763 aa21.67■■□□□ 1.06
SMARCC2-212ENST00000552566 PKD2Q13563 968 aa21.64■■□□□ 1.05
SMARCC2-212ENST00000552566 TNRQ92752 1358 aa21.61■■□□□ 1.05
SMARCC2-212ENST00000552566 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms